FFCP PHASE1:Hg19::chrX:10557997..10558002,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4281 | |EntrezGene=4281 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7095 | |HGNC=7095 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_uc004cug.1_5end | |association_with_transcript=-14bp_to_uc004cug.1_5end | ||
|cluster_id=chrX:10557997..10558002,- | |||
|description=CAGE_peak_17_at_MID1_5end | |description=CAGE_peak_17_at_MID1_5end | ||
|id=chrX:10557997..10558002,- | |id=chrX:10557997..10558002,- | ||
|ontology_enrichment_celltype=CL:0000039!9.56e-10!7;CL:0000586!9.56e-10!7;CL:0000080!1.96e-07!6 | |ontology_enrichment_celltype=CL:0000039!9.56e-10!7;CL:0000586!9.56e-10!7;CL:0000080!1.96e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000342;1.44e-17;1!CL:0002565;1.44e-17;1!CL:0002535;8.33e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000342,1.70e-17,1;CL:0002565,1.70e-17,1;CL:0002535,8.69e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;4.83e-18;1!UBERON:0000358;8.02e-18;1!UBERON:0007297;1.07e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000478!4.10e-13!24;UBERON:0002331!5.27e-11!10;UBERON:0000358!5.27e-11!10;UBERON:0000307!5.27e-11!10;UBERON:0000091!5.27e-11!10;UBERON:0000087!5.27e-11!10;UBERON:0007806!5.27e-11!10;UBERON:0008780!5.27e-11!10;UBERON:0005728!5.27e-11!10;UBERON:0001255!3.83e-09!2;UBERON:0001556!3.83e-09!2;UBERON:0003350!5.93e-08!5;UBERON:0006554!1.89e-07!44;UBERON:0001008!3.03e-07!45;UBERON:0001046!3.34e-07!19;UBERON:0006947!5.48e-07!3;UBERON:0004054!5.48e-07!3 | |ontology_enrichment_uberon=UBERON:0000478!4.10e-13!24;UBERON:0002331!5.27e-11!10;UBERON:0000358!5.27e-11!10;UBERON:0000307!5.27e-11!10;UBERON:0000091!5.27e-11!10;UBERON:0000087!5.27e-11!10;UBERON:0007806!5.27e-11!10;UBERON:0008780!5.27e-11!10;UBERON:0005728!5.27e-11!10;UBERON:0001255!3.83e-09!2;UBERON:0001556!3.83e-09!2;UBERON:0003350!5.93e-08!5;UBERON:0006554!1.89e-07!44;UBERON:0001008!3.03e-07!45;UBERON:0001046!3.34e-07!19;UBERON:0006947!5.48e-07!3;UBERON:0004054!5.48e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;9.16e-27;10!UBERON:0000998;4.83e-18;1!UBERON:0006868;4.83e-18;1!UBERON:0002506;1.44e-17;1!UBERON:0001769;1.44e-17;1!UBERON:0000478;3.07e-17;24!UBERON:0000178;1.36e-10;15!UBERON:0000179;1.36e-10;15!UBERON:0000463;1.36e-10;15!UBERON:0006955;8.33e-10;2!UBERON:0004801;8.33e-10;2!UBERON:0006947;7.08e-07;3!UBERON:0004054;7.08e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,9.47e-27,10;UBERON:0000358,9.47e-27,10;UBERON:0000307,9.47e-27,10;UBERON:0000091,9.47e-27,10;UBERON:0000087,9.47e-27,10;UBERON:0007010,9.47e-27,10;UBERON:0007806,9.47e-27,10;UBERON:0008780,9.47e-27,10;UBERON:0005728,9.47e-27,10;UBERON:0000998,5.26e-18,1;UBERON:0006868,5.26e-18,1;UBERON:0002506,1.70e-17,1;UBERON:0001769,1.70e-17,1;UBERON:0000478,3.13e-17,24;UBERON:0000178,1.31e-10,15;UBERON:0000179,1.31e-10,15;UBERON:0000463,1.31e-10,15;UBERON:0006955,8.69e-10,2;UBERON:0004801,8.69e-10,2;UBERON:0006947,7.28e-07,3;UBERON:0004054,7.28e-07,3 | |||
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| ||
|short_description=p17@MID1 | |short_description=p17@MID1 | ||
}} | }} |
Latest revision as of 21:56, 18 September 2015
Short description: | p17@MID1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_MID1_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_uc004cug.1_5end |
EntrezGene: | MID1 |
HGNC: | 7095 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell (sensu Vertebrata) | 1.70e-17 | 1 |
iris pigment epithelial cell | 1.70e-17 | 1 |
epithelial cell of cervix | 8.69e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 9.47e-27 | 10 |
blastocyst | 9.47e-27 | 10 |
blastula | 9.47e-27 | 10 |
bilaminar disc | 9.47e-27 | 10 |
inner cell mass | 9.47e-27 | 10 |
cleaving embryo | 9.47e-27 | 10 |
connecting stalk | 9.47e-27 | 10 |
inner cell mass derived epiblast | 9.47e-27 | 10 |
extraembryonic mesoderm | 9.47e-27 | 10 |
seminal vesicle | 5.26e-18 | 1 |
seminal fluid secreting gland | 5.26e-18 | 1 |
iris epithelium | 1.70e-17 | 1 |
iris | 1.70e-17 | 1 |
extraembryonic structure | 3.13e-17 | 24 |
blood | 1.31e-10 | 15 |
haemolymphatic fluid | 1.31e-10 | 15 |
organism substance | 1.31e-10 | 15 |
uterine epithelium | 8.69e-10 | 2 |
cervix epithelium | 8.69e-10 | 2 |
male genital duct | 7.28e-07 | 3 |
internal male genitalia | 7.28e-07 | 3 |