FFCP PHASE1:Hg19::chr15:72668393..72668408,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3073 | |EntrezGene=3073 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4878 | |HGNC=4878 | ||
|TSSclassifier=strong | |||
|UniProt=E9PGL4 | |UniProt=E9PGL4 | ||
|association_with_transcript=-49bp_to_ENST00000429918_5end | |association_with_transcript=-49bp_to_ENST00000429918_5end | ||
|cluster_id=chr15:72668393..72668408,- | |||
|description=CAGE_peak_2_at_HEXA_5end | |description=CAGE_peak_2_at_HEXA_5end | ||
|id=chr15:72668393..72668408,- | |id=chr15:72668393..72668408,- | ||
|ontology_enrichment_celltype=CL:0002371!4.73e-17!591;CL:0000548!1.32e-15!679;CL:0000004!1.32e-15!679;CL:0000255!1.32e-15!679;CL:0000012!4.06e-15!682;CL:0000144!4.98e-15!625;CL:0002194!2.63e-11!63;CL:0000576!2.63e-11!63;CL:0000040!2.63e-11!63;CL:0000559!2.63e-11!63;CL:0000003!6.72e-11!722;CL:0000063!7.99e-11!578;CL:0002009!1.70e-10!65;CL:0000557!4.59e-09!71;CL:0000048!1.52e-08!430;CL:0000839!2.22e-08!70;CL:0000723!3.92e-08!436;CL:0002057!4.28e-08!42;CL:0000222!5.28e-08!119;CL:0000766!8.83e-08!76;CL:0000055!1.07e-07!180;CL:0000860!1.10e-07!45;CL:0000220!1.95e-07!246;CL:0000034!4.93e-07!444;CL:0002321!6.06e-07!248 | |ontology_enrichment_celltype=CL:0002371!4.73e-17!591;CL:0000548!1.32e-15!679;CL:0000004!1.32e-15!679;CL:0000255!1.32e-15!679;CL:0000012!4.06e-15!682;CL:0000144!4.98e-15!625;CL:0002194!2.63e-11!63;CL:0000576!2.63e-11!63;CL:0000040!2.63e-11!63;CL:0000559!2.63e-11!63;CL:0000003!6.72e-11!722;CL:0000063!7.99e-11!578;CL:0002009!1.70e-10!65;CL:0000557!4.59e-09!71;CL:0000048!1.52e-08!430;CL:0000839!2.22e-08!70;CL:0000723!3.92e-08!436;CL:0002057!4.28e-08!42;CL:0000222!5.28e-08!119;CL:0000766!8.83e-08!76;CL:0000055!1.07e-07!180;CL:0000860!1.10e-07!45;CL:0000220!1.95e-07!246;CL:0000034!4.93e-07!444;CL:0002321!6.06e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000473;9.22e-07;39!CL:0000234;9.22e-07;39!CL:0000860;9.78e-07;33!CL:0002057;9.78e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.20e-12,59;CL:0000576,3.20e-12,59;CL:0000040,3.20e-12,59;CL:0000559,3.20e-12,59;CL:0002009,1.54e-11,61;CL:0000048,9.21e-11,427;CL:0000723,3.49e-10,433;CL:0000557,1.46e-09,67;CL:0000473,1.62e-09,48;CL:0000234,1.62e-09,48;CL:0000034,5.90e-09,441;CL:0000839,7.49e-09,66;CL:0000766,1.55e-08,72;CL:0000860,3.50e-08,42;CL:0002057,3.50e-08,42;CL:0000222,3.60e-08,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!7.91e-15!448;UBERON:0004120!7.91e-15!448;UBERON:0006603!7.91e-15!448;UBERON:0002204!4.20e-14!167;UBERON:0003081!4.01e-13!216;UBERON:0002371!1.10e-09!80;UBERON:0004765!3.45e-09!101;UBERON:0001434!3.45e-09!101;UBERON:0001474!9.60e-09!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.57e-14,167;UBERON:0000926,2.15e-12,315;UBERON:0004120,2.15e-12,315;UBERON:0006603,2.15e-12,315;UBERON:0003081,5.01e-12,203;UBERON:0002371,3.21e-10,76;UBERON:0001434,3.61e-09,100;UBERON:0001474,3.74e-09,82;UBERON:0004765,5.63e-09,90;UBERON:0002405,6.64e-08,93;UBERON:0002384,3.47e-07,371 | |||
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| ||
|short_description=p2@HEXA | |short_description=p2@HEXA | ||
}} | }} |
Latest revision as of 22:57, 18 September 2015
Short description: | p2@HEXA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HEXA_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000429918_5end |
EntrezGene: | HEXA |
HGNC: | 4878 |
UniProt: | E9PGL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.20e-12 | 59 |
monocyte | 3.20e-12 | 59 |
monoblast | 3.20e-12 | 59 |
promonocyte | 3.20e-12 | 59 |
macrophage dendritic cell progenitor | 1.54e-11 | 61 |
multi fate stem cell | 9.21e-11 | 427 |
somatic stem cell | 3.49e-10 | 433 |
granulocyte monocyte progenitor cell | 1.46e-09 | 67 |
defensive cell | 1.62e-09 | 48 |
phagocyte | 1.62e-09 | 48 |
stem cell | 5.90e-09 | 441 |
myeloid lineage restricted progenitor cell | 7.49e-09 | 66 |
myeloid leukocyte | 1.55e-08 | 72 |
classical monocyte | 3.50e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.50e-08 | 42 |
mesodermal cell | 3.60e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.57e-14 | 167 |
mesoderm | 2.15e-12 | 315 |
mesoderm-derived structure | 2.15e-12 | 315 |
presumptive mesoderm | 2.15e-12 | 315 |
lateral plate mesoderm | 5.01e-12 | 203 |
bone marrow | 3.21e-10 | 76 |
skeletal system | 3.61e-09 | 100 |
bone element | 3.74e-09 | 82 |
skeletal element | 5.63e-09 | 90 |
immune system | 6.64e-08 | 93 |
connective tissue | 3.47e-07 | 371 |