FFCP PHASE1:Hg19::chr3:52259644..52259667,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54106 | |EntrezGene=54106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=15633 | |HGNC=15633 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NR96 | |UniProt=Q9NR96 | ||
|association_with_transcript=0bp_to_AB045180_5end | |association_with_transcript=0bp_to_AB045180_5end | ||
|cluster_id=chr3:52259644..52259667,- | |||
|description=CAGE_peak_1_at_TLR9_5end | |description=CAGE_peak_1_at_TLR9_5end | ||
|id=chr3:52259644..52259667,- | |id=chr3:52259644..52259667,- | ||
|ontology_enrichment_celltype=CL:0000945!5.60e-37!24;CL:0000826!5.60e-37!24;CL:0000037!1.10e-27!172;CL:0000566!1.10e-27!172;CL:0000542!3.90e-25!53;CL:0000051!3.90e-25!53;CL:0000988!5.60e-25!182;CL:0000838!7.67e-24!52;CL:0000236!1.51e-22!14;CL:0002032!3.85e-22!165;CL:0000837!3.85e-22!165;CL:0000738!1.88e-21!140;CL:0002087!6.45e-21!119;CL:0002031!1.73e-15!124 | |ontology_enrichment_celltype=CL:0000945!5.60e-37!24;CL:0000826!5.60e-37!24;CL:0000037!1.10e-27!172;CL:0000566!1.10e-27!172;CL:0000542!3.90e-25!53;CL:0000051!3.90e-25!53;CL:0000988!5.60e-25!182;CL:0000838!7.67e-24!52;CL:0000236!1.51e-22!14;CL:0002032!3.85e-22!165;CL:0000837!3.85e-22!165;CL:0000738!1.88e-21!140;CL:0002087!6.45e-21!119;CL:0002031!1.73e-15!124 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.90e-59;24!CL:0000236;7.39e-36;13!CL:0000542;2.36e-20;53!CL:0000784;2.24e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.66e-59,24;CL:0000826,1.66e-59,24;CL:0000236,1.90e-38,14;CL:0000542,5.98e-31,53;CL:0000051,5.98e-31,53;CL:0000838,6.16e-29,52;CL:0000037,1.58e-21,168;CL:0000988,7.40e-20,177;CL:0002032,9.16e-17,161;CL:0000837,9.16e-17,161;CL:0000738,1.92e-15,136;CL:0002087,1.40e-14,115;CL:0002031,1.74e-10,120;CL:0000784,2.24e-10,3;CL:0000817,1.79e-09,3;CL:0000785,5.71e-07,2;CL:0000955,5.71e-07,2;CL:0000818,5.71e-07,2;CL:0000954,5.71e-07,2;CL:0000816,5.71e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;2.36e-20;53!CL:0000954;5.62e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!6.04e-18!51;DOID:0060083!6.04e-18!51;DOID:1240!5.74e-12!39;DOID:8692!1.81e-07!31;DOID:0060058!2.42e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:2531;3.66e-09;51!DOID:0060083;3.66e-09;51!DOID:1240;1.47e-08;39!DOID:0060058;3.05e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.33e-15,51;DOID:0060083,2.33e-15,51;DOID:1240,2.60e-09,39;DOID:0060058,3.05e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.76e-10!15;UBERON:0000179!1.76e-10!15;UBERON:0000463!1.76e-10!15;UBERON:0007023!3.98e-09!115;UBERON:0002390!6.51e-09!102;UBERON:0003061!6.51e-09!102;UBERON:0002193!8.45e-09!112;UBERON:0004177!7.72e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;2.50e-16;32!UBERON:0000178;1.49e-15;15!UBERON:0000179;1.49e-15;15!UBERON:0000463;1.49e-15;15!UBERON:0002193;6.57e-12;42!UBERON:0004177;1.50e-09;5!UBERON:0005057;1.50e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.58e-15,15;UBERON:0000179,1.58e-15,15;UBERON:0000463,1.58e-15,15;UBERON:0004177,8.13e-07,7;UBERON:0005057,8.13e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87720651731561,7.55325422939501,6.61170563034906,0.786728553697808,0.767658796194425,2.16742572642506,0,0,0,87.3830022545802,39.2387081665283,0.293600439334847,0,0,0,0.223915474239924,1.29557466407592,0,0.290796477559129,0.377875943688809,0.727752183563449,0.232429036905685,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0.641858054152187,0,0,0,0,0,0,0,0,0,0,0,0.736555271975129,0,0,0,0,0,0,0.16072558669708,0,0,0,15.839662001519,10.9227722252426,19.5692035849982,20.0563204606258,12.8126715851524,10.3455439191807,13.8819423284821,20.0351288452426,9.10740750575117,9.39579502993502,7.26319133437935,0,0.560508562981536,3.68737718685108,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0.451725357233318,0.383959833463255,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,98.7351184624116,53.1955267025519,69.8340102499582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3082884179662,0.215714200818617,2.02782359826544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,5.07447609232169,4.58782324285425,1.70894156152249,2.62054953003568,2.46817363851717,3.8908398671563,3.7802200606668,7.13812658664843,0,0,0,32.3297524718751,7.21346064882224,30.0218578930308,0.318852545457645,2.19537308576098,0,0.211673582723883,0,10.9510899464249,21.4540598291201,4.7003968731907,5.01268954180134,0,6.26293492904428,3.43059502224781,4.68430861459359,0.687010689511529,0.307240764308458,0.223676107892416,0.667396566847634,6.05703095746325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,24.0367006512098,0,0,11.0776324914963,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,21.4605926211047,0.941881538370149,0,0,0,0,0,0,0,0,0,0,2.98578579323551,1.76915129006678,1.83309043480088,0,0,0,0,0.802577647298789,0,18.9752980784293,0,0.242780379534093,0,2.41981432097328,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,1.16386819786103,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0.160753148465019,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,2.48543433208317,11.9079845234868,8.29968853971366,17.9035119619917,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.48105264715392,5.5108793491461,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.177404740325278,10.8319948302433,0,0,0,0,0,0.549451649953598,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,2.46957305945423,0.874238242015829,0.470317296361523,0,0,0,0,0,0,22.1802046432454,15.7921825535264,0.699588091474503,0,0,0,0,5.04602211744995,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0.303114792872958,0.267964130156178,0,0,1.91910583710883,0.952257725854961,6.3297131639286,4.90390242937277,0,0,0,0.435433495793923,0,23.6405706081202,1.79305513481691,0,0,0,0,0,0,0,0,0,12.6802489962347,14.7461506459487 | 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| ||
|short_description=p1@TLR9 | |short_description=p1@TLR9 | ||
}} | }} |
Latest revision as of 22:57, 18 September 2015
Short description: | p1@TLR9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TLR9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AB045180_5end |
EntrezGene: | TLR9 |
HGNC: | 15633 |
UniProt: | Q9NR96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.66e-59 | 24 |
pro-B cell | 1.66e-59 | 24 |
B cell | 1.90e-38 | 14 |
lymphocyte | 5.98e-31 | 53 |
common lymphoid progenitor | 5.98e-31 | 53 |
lymphoid lineage restricted progenitor cell | 6.16e-29 | 52 |
hematopoietic stem cell | 1.58e-21 | 168 |
hematopoietic cell | 7.40e-20 | 177 |
hematopoietic oligopotent progenitor cell | 9.16e-17 | 161 |
hematopoietic multipotent progenitor cell | 9.16e-17 | 161 |
leukocyte | 1.92e-15 | 136 |
nongranular leukocyte | 1.40e-14 | 115 |
hematopoietic lineage restricted progenitor cell | 1.74e-10 | 120 |
plasmacytoid dendritic cell | 2.24e-10 | 3 |
precursor B cell | 1.79e-09 | 3 |
mature B cell | 5.71e-07 | 2 |
pre-B-II cell | 5.71e-07 | 2 |
transitional stage B cell | 5.71e-07 | 2 |
small pre-B-II cell | 5.71e-07 | 2 |
immature B cell | 5.71e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.58e-15 | 15 |
haemolymphatic fluid | 1.58e-15 | 15 |
organism substance | 1.58e-15 | 15 |
hemopoietic organ | 8.13e-07 | 7 |
immune organ | 8.13e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.33e-15 | 51 |
immune system cancer | 2.33e-15 | 51 |
leukemia | 2.60e-09 | 39 |
lymphoma | 3.05e-07 | 10 |