FFCP PHASE1:Hg19::chr1:180199393..180199426,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89884 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21734 | |||
|TSSclassifier=strong | |||
|UniProt=Q969G2 | |||
|association_with_transcript=0bp_to_ENST00000263726_5end | |||
|cluster_id=chr1:180199393..180199426,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_1_at_LHX4_5end | |||
|id=chr1:180199393..180199426,+ | |||
|ontology_enrichment_celltype=CL:0000860!2.60e-10!45;CL:0002057!5.21e-08!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.18e-14;29!UBERON:0003056;1.28e-08;3 | |||
|ontology_enrichment_disease=DOID:305!1.71e-22!106;DOID:0050687!5.89e-22!143;DOID:162!2.71e-19!235;DOID:14566!2.02e-18!239 | |||
|ontology_enrichment_disease_v019=DOID:1799;6.98e-07;1!DOID:10165;6.98e-07;1!DOID:1798;6.98e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.91e-08,143;DOID:162,3.66e-08,235;DOID:14566,6.86e-08,239;DOID:305,3.39e-07,106;DOID:1799,5.89e-07,1;DOID:10165,5.89e-07,1;DOID:1798,5.89e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!6.24e-15!9;UBERON:0008947!5.44e-09!38;UBERON:0003258!5.44e-09!38;UBERON:0000072!3.79e-08!46;UBERON:0001557!3.88e-08!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.91e-38;9!UBERON:0001557;6.91e-38;9!UBERON:0001905;8.14e-13;2!UBERON:0002757;8.14e-13;2!UBERON:0010134;8.14e-13;2!UBERON:0005408;8.14e-13;2!UBERON:0001899;8.14e-13;2!UBERON:0000072;4.23e-10;37!UBERON:0000065;2.60e-08;44!UBERON:0003296;8.28e-07;4!UBERON:0010133;8.28e-07;4!UBERON:0002784;8.28e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.72e-38,9;UBERON:0001557,2.30e-17,19;UBERON:0001905,8.15e-13,2;UBERON:0002757,8.15e-13,2;UBERON:0010134,8.15e-13,2;UBERON:0005408,8.15e-13,2;UBERON:0001899,8.15e-13,2;UBERON:0008947,2.71e-10,38;UBERON:0003258,2.71e-10,38;UBERON:0000072,4.92e-08,47;UBERON:0003296,8.29e-07,4;UBERON:0010133,8.29e-07,4;UBERON:0002784,8.29e-07,4;UBERON:0000065,8.41e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.464858073811369,0,0.619412741790207,0.575384784644301,0.768482119587302,0.709446689665756,0.689491361473237,0,0,0.376484679085209,0.272906150057846,0,0.612167784741805,0.320929027076094,0.639337125799041,1.31940520074686,0.199463657621632,0,0,0,0,1.25624332628372,1.0429658368404,1.73751075764093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0,0,0.252320850875628,0.36497735907583,0,0,0,0,0,2.60274960087657,2.69735504124963,2.16909926895134,2.20587945464788,1.52515610864684,3.08451804844426,3.23595139584395,1.96221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,11.720891496748,13.6965769868176,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.520855522170466,0.174919999992391,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,1.0893846351899,0,0,0.227884111694002,0.23056390438806,1.97466817701499,0.54323685961004,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0.063186579628488,0.300646838828985,1.14057010536972,0,0,0,0,0,0,1.56203764501618,0,0.0870592065804026,0,0,0.387025325156341,0.65780385377567,0.574808199372465,0,0,7.00540296419651,0.137041924646751,0,0,0.195551382734803,0.0801588202515337,0,0.39961921916426,0.576361668616424,2.1761953271524,0,0.14405479798815,0.248505071130865,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984274815147488,0,0,0,0.643012593860077,1.2378549293751,0.415440338029185,0.2249738915515,0,0,0,0.709251365692784,0,0,0.537862017998534,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0.513260513652988,0,0,0,0,0,0,2.9230223611415,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0.415045904808692,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,1.28664954824955,1.04397716786085,0,0.231522474323834,0,0.71635536432595,0,0.438568099157414,0,0.964570191354574,0,0.256241518587947,8.29032820154877,0,0,0,0,0,0.327609848846413,0,0.211312123358627,0,0,0,2.27006381426734,0,0,0,0,0,0,0,0,0,0,0,0,1.65609664502632,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0.690359926060101,0.198916222116275,0,0,0,2.88097363929565,0.163771917510097,0,0,0,0,0,0,0,0,0,0,28.3921973015492,25.5575628886306,0,0.227662191351298,0.266107110487916,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,4.64597537148266,8.53273503356724,1.51113852978563,0,0,0,0,0,0,0,0,0,1.60374807980835,0,0,0,0,0.487671699929078,0,0,0,0,0,0.795803100645473,0.356760272332706,0.5647304101948,20.5588766313952,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,2.68211655728414,0,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0,0.36757959813938,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.449126010532934,0,0,0,0,0,0 | |||
|short_description=p1@LHX4 | |||
}} |
Latest revision as of 23:28, 18 September 2015
Short description: | p1@LHX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LHX4_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000263726_5end |
EntrezGene: | LHX4 |
HGNC: | 21734 |
UniProt: | Q969G2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 5.72e-38 | 9 |
upper respiratory tract | 2.30e-17 | 19 |
pineal body | 8.15e-13 | 2 |
regional part of epithalamus | 8.15e-13 | 2 |
secretory circumventricular organ | 8.15e-13 | 2 |
circumventricular organ | 8.15e-13 | 2 |
epithalamus | 8.15e-13 | 2 |
respiratory primordium | 2.71e-10 | 38 |
endoderm of foregut | 2.71e-10 | 38 |
segment of respiratory tract | 4.92e-08 | 47 |
gland of diencephalon | 8.29e-07 | 4 |
neuroendocrine gland | 8.29e-07 | 4 |
regional part of diencephalon | 8.29e-07 | 4 |
respiratory tract | 8.41e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.91e-08 | 143 |
cancer | 3.66e-08 | 235 |
disease of cellular proliferation | 6.86e-08 | 239 |
carcinoma | 3.39e-07 | 106 |
islet cell tumor | 5.89e-07 | 1 |
endocrine pancreas cancer | 5.89e-07 | 1 |
pancreatic endocrine carcinoma | 5.89e-07 | 1 |