FFCP PHASE1:Hg19::chr18:21033198..21033209,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8780 | |EntrezGene=8780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11451 | |HGNC=11451 | ||
|TSSclassifier=strong | |||
|UniProt=O14730,B0YJ89 | |UniProt=O14730,B0YJ89 | ||
|association_with_transcript=411bp_to_ENST00000339486,NM_003831,uc002kui.3,uc010dls.2,uc010xas.1_5end | |association_with_transcript=411bp_to_ENST00000339486,NM_003831,uc002kui.3,uc010dls.2,uc010xas.1_5end | ||
|cluster_id=chr18:21033198..21033209,+ | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_3_at_RIOK3_5end | |description=CAGE_peak_3_at_RIOK3_5end | ||
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|ontology_enrichment_celltype=CL:0002057!7.94e-17!42;CL:0000860!6.13e-16!45;CL:0002009!1.25e-10!65;CL:0002194!1.93e-10!63;CL:0000576!1.93e-10!63;CL:0000040!1.93e-10!63;CL:0000559!1.93e-10!63;CL:0000839!4.37e-10!70;CL:0000766!3.54e-09!76;CL:0000557!7.01e-09!71 | |ontology_enrichment_celltype=CL:0002057!7.94e-17!42;CL:0000860!6.13e-16!45;CL:0002009!1.25e-10!65;CL:0002194!1.93e-10!63;CL:0000576!1.93e-10!63;CL:0000040!1.93e-10!63;CL:0000559!1.93e-10!63;CL:0000839!4.37e-10!70;CL:0000766!3.54e-09!76;CL:0000557!7.01e-09!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.25e-32;33!CL:0002057;6.25e-32;33!CL:0000473;1.68e-20;39!CL:0000234;1.68e-20;39!CL:0000576;8.86e-16;48!CL:0000766;2.36e-09;69 | |ontology_enrichment_celltype_v019=CL:0000860;6.25e-32;33!CL:0002057;6.25e-32;33!CL:0000473;1.68e-20;39!CL:0000234;1.68e-20;39!CL:0000576;8.86e-16;48!CL:0000766;2.36e-09;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.83e-30,42;CL:0002057,2.83e-30,42;CL:0000473,2.62e-25,48;CL:0000234,2.62e-25,48;CL:0000839,4.21e-20,66;CL:0002194,2.04e-18,59;CL:0000576,2.04e-18,59;CL:0000040,2.04e-18,59;CL:0000559,2.04e-18,59;CL:0002009,1.55e-17,61;CL:0000766,1.89e-17,72;CL:0000557,1.54e-16,67;CL:0000763,4.16e-12,108;CL:0000049,4.16e-12,108;CL:0002031,1.03e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.61e-22;42 | |ontology_enrichment_development_v019=CL:0002057;2.61e-22;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.99e-09!102;UBERON:0003061!3.99e-09!102;UBERON:0002193!1.30e-07!112;UBERON:0002371!7.35e-07!80 | |ontology_enrichment_uberon=UBERON:0002390!3.99e-09!102;UBERON:0003061!3.99e-09!102;UBERON:0002193!1.30e-07!112;UBERON:0002371!7.35e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.53e-10;15!UBERON:0000179;3.53e-10;15!UBERON:0000463;3.53e-10;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.53e-10;15!UBERON:0000179;3.53e-10;15!UBERON:0000463;3.53e-10;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.84e-21,98;UBERON:0003061,4.84e-21,98;UBERON:0002193,5.78e-18,108;UBERON:0002371,1.04e-14,76;UBERON:0004765,4.08e-14,90;UBERON:0001474,5.37e-13,82;UBERON:0001434,9.13e-12,100;UBERON:0002405,2.95e-11,93;UBERON:0000178,3.60e-10,15;UBERON:0000179,3.60e-10,15;UBERON:0000463,3.60e-10,15;UBERON:0003081,2.02e-07,203 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,1.0007329835313,0.446961094427288,0,0,1.26343974685366,0.522371256399677,0,0,0,0.263766978228454,0,0.331397375727916,1.34465029290355,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0.229240217243854,0.328402357799783,0.314843125254717,0.393364276848904,2.30297638858328,0.619264493264304,0,0,0.369754010166788,0,0.142169232487422,0,0,3.40925560699241,0.868043482863407,0,0.32389366601898,0.257575567634187,2.03557534291391,1.88937971844405,2.18325655069035,1.62700325833979,4.52284676824008,2.16794459626573,1.43846196161075,1.5369642391746,2.12834006899727,2.75796544589295,3.22742341791913,2.70852973188684,3.01187743268168,3.27487380069415,1.57306439111559,3.67300670845083,1.92557416245656,0.639337125799041,0,1.59570926097305,0.426224750532694,3.19230162491442,2.8369261234557,1.86846674698672,2.76373531782418,4.17186334736161,2.6062661364614,3.02699751316684,2.94622108790052,2.53169909952708,0.845021145247767,0.637812899895131,0.419317291016752,0.898629049171961,0.150176892841506,0.32145117339416,0.285012743741249,1.79025009479181,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.393419540227666,0,0.205601498999509,0,0,0,0,0.334231370655521,0.589211814949674,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80642697289893,0,0.434473211648397,0,0.670700859703636,0.255725123687061,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0.378139268656271,0.221729397462564,0.175669571386252,0.196468613246569,0,0.741568885568859,0.324547393654683,0.870648686496336,0.26591592103773,0,0,0,0.596287222100115,0,0,0,0,0.275118041940067,0.208994966536811,0,0.71153252537342,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,2.63560834872127,0,0.436094052142534,0,0.12663051166458,2.64818361626438,0.573673241497627,0.709336764396714,0,0,0.49333509683432,0,0,0,0.151357427644931,0,0,0.624320153660641,0,0,0.117434498643765,0,0,0.408308342509787,0,0.413303124703062,0,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0,0.45071417671979,0.113432183160021,0.538168907066586,0.640672166455702,0.211931901159562,0,0.103052529238439,1.03056216018252,0.37223371266318,0.337552664482532,0.292311015483596,0.757301322732344,0.368199594569197,0,0.355009592516614,0.302256294682921,0,3.67195621010264,0.272746120590835,0.860413786167011,0,0,0.69716365721711,0.414644220061482,0,0,0,0,0,0.464367928031979,0.721879481669586,0.236613600079688,0.337169380156203,1.20505514941741,0.330881918197182,0,0.237270619111097,0.674156540800822,0.784885860501384,0.769494313892781,0,0,0,0,3.80265104465493,0,1.18157981336281,0.441463099414651,0,0.686271241194102,1.31700342490351,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.587043471179108,0.433099343283221,0,0.190254152234598,0,0,0.492434012174795,0.468008530278475,0.148631162288728,3.74935335947108,1.6798212819886,1.41775097242386,0.985143749731331,1.16253575405585,0.383382679165211,1.97065295158377,0.088048434013226,0,0,0,0.317489471460845,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.36669142910475,0.775630294546667,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,2.1100756394171,0,1.19967589418468,0,0,0,0.479249710983165,0,0,1.73737568001095,0.205476322550383,0.179060963239896,0,0,0.431255149719035,0.385029108839245,0,0,0.773288812777695,0.502548796003046,0.637938751653163,0.749007023947182,0,0,0.24538298343828,0,0,0,0.178428988797162,0.630809660135739,0.234282829985426,0.300946099727719,4.5481500811197,0,1.32845119707087,0,0,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0.303127571446259,0,0.30239029332968,0.744323423456331,0.767309866440312,0,0.128139149255701,1.02341449813341,0.321707842287215,0,0,0.710246901252508,0.0821271560138091,0.519254429183621,0.348631135379878,0.120859449591622,2.6065841139427,2.11786274552562,0.574072240823034,0.728364672026868,0.131124414959424,0,0.15403067420883,0,1.46139224653261,0.211103257785751,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,15.1289314885695,13.3332080022699,0.512900250232778,0.328014645699706,1.30151357865721,0.618246069886334,0,0.165018999841176,0.574265537996172,1.30012049207304,0,0.193341436584244,0,0.15350367472613,0.137836572484531,0.214840489736547,0,0.340906509664404,0.534192213880424,2.64455864577565,2.49847087574638,3.95599408733211,1.71968227454435,0.929691098594572,2.51849877464512,0,0.308033580176089,0.532306030317022,0,0.74129687641568,0.572499546967965,0,0,0.38126038784765,0.255897791311334,0.42793898803392,0,0.78494864019923,0.179872457583315,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.707027159768564,0,0,0.66343897524122,0.876901770507525,0.578775534266688,0,0.811641507850816,0.30982349809975,0.563391205064483,0,0.491245205065606,0.35667105148125,0.354761064070598,0.633322905892992,0,0,0,0.288666338176536,0.670302275535787,0,0.659006605437454,0,0,0.443430153536676,0.229723400206959,14.2085330585007,22.1744790071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|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,1.0007329835313,0.446961094427288,0,0,1.26343974685366,0.522371256399677,0,0,0,0.263766978228454,0,0.331397375727916,1.34465029290355,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0.229240217243854,0.328402357799783,0.314843125254717,0.393364276848904,2.30297638858328,0.619264493264304,0,0,0.369754010166788,0,0.142169232487422,0,0,3.40925560699241,0.868043482863407,0,0.32389366601898,0.257575567634187,2.03557534291391,1.88937971844405,2.18325655069035,1.62700325833979,4.52284676824008,2.16794459626573,1.43846196161075,1.5369642391746,2.12834006899727,2.75796544589295,3.22742341791913,2.70852973188684,3.01187743268168,3.27487380069415,1.57306439111559,3.67300670845083,1.92557416245656,0.639337125799041,0,1.59570926097305,0.426224750532694,3.19230162491442,2.8369261234557,1.86846674698672,2.76373531782418,4.17186334736161,2.6062661364614,3.02699751316684,2.94622108790052,2.53169909952708,0.845021145247767,0.637812899895131,0.419317291016752,0.898629049171961,0.150176892841506,0.32145117339416,0.285012743741249,1.79025009479181,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0.393419540227666,0,0.205601498999509,0,0,0,0,0.334231370655521,0.589211814949674,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80642697289893,0,0.434473211648397,0,0.670700859703636,0.255725123687061,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0.378139268656271,0.221729397462564,0.175669571386252,0.196468613246569,0,0.741568885568859,0.324547393654683,0.870648686496336,0.26591592103773,0,0,0,0.596287222100115,0,0,0,0,0.275118041940067,0.208994966536811,0,0.71153252537342,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,2.63560834872127,0,0.436094052142534,0,0.12663051166458,2.64818361626438,0.573673241497627,0.709336764396714,0,0,0.49333509683432,0,0,0,0.151357427644931,0,0,0.624320153660641,0,0,0.117434498643765,0,0,0.408308342509787,0,0.413303124703062,0,0.247266929278557,0,0,0.168336113954066,0,0,0.438977620880838,0,0.45071417671979,0.113432183160021,0.538168907066586,0.640672166455702,0.211931901159562,0,0.103052529238439,1.03056216018252,0.37223371266318,0.337552664482532,0.292311015483596,0.757301322732344,0.368199594569197,0,0.355009592516614,0.302256294682921,0,3.67195621010264,0.272746120590835,0.860413786167011,0,0,0.69716365721711,0.414644220061482,0,0,0,0,0,0.464367928031979,0.721879481669586,0.236613600079688,0.337169380156203,1.20505514941741,0.330881918197182,0,0.237270619111097,0.674156540800822,0.784885860501384,0.769494313892781,0,0,0,0,3.80265104465493,0,1.18157981336281,0.441463099414651,0,0.686271241194102,1.31700342490351,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.587043471179108,0.433099343283221,0,0.190254152234598,0,0,0.492434012174795,0.468008530278475,0.148631162288728,3.74935335947108,1.6798212819886,1.41775097242386,0.985143749731331,1.16253575405585,0.383382679165211,1.97065295158377,0.088048434013226,0,0,0,0.317489471460845,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.36669142910475,0.775630294546667,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,2.1100756394171,0,1.19967589418468,0,0,0,0.479249710983165,0,0,1.73737568001095,0.205476322550383,0.179060963239896,0,0,0.431255149719035,0.385029108839245,0,0,0.773288812777695,0.502548796003046,0.637938751653163,0.749007023947182,0,0,0.24538298343828,0,0,0,0.178428988797162,0.630809660135739,0.234282829985426,0.300946099727719,4.5481500811197,0,1.32845119707087,0,0,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0.303127571446259,0,0.30239029332968,0.744323423456331,0.767309866440312,0,0.128139149255701,1.02341449813341,0.321707842287215,0,0,0.710246901252508,0.0821271560138091,0.519254429183621,0.348631135379878,0.120859449591622,2.6065841139427,2.11786274552562,0.574072240823034,0.728364672026868,0.131124414959424,0,0.15403067420883,0,1.46139224653261,0.211103257785751,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,15.1289314885695,13.3332080022699,0.512900250232778,0.328014645699706,1.30151357865721,0.618246069886334,0,0.165018999841176,0.574265537996172,1.30012049207304,0,0.193341436584244,0,0.15350367472613,0.137836572484531,0.214840489736547,0,0.340906509664404,0.534192213880424,2.64455864577565,2.49847087574638,3.95599408733211,1.71968227454435,0.929691098594572,2.51849877464512,0,0.308033580176089,0.532306030317022,0,0.74129687641568,0.572499546967965,0,0,0.38126038784765,0.255897791311334,0.42793898803392,0,0.78494864019923,0.179872457583315,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.707027159768564,0,0,0.66343897524122,0.876901770507525,0.578775534266688,0,0.811641507850816,0.30982349809975,0.563391205064483,0,0.491245205065606,0.35667105148125,0.354761064070598,0.633322905892992,0,0,0,0.288666338176536,0.670302275535787,0,0.659006605437454,0,0,0.443430153536676,0.229723400206959,14.2085330585007,22.1744790071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| ||
|short_description=p3@RIOK3 | |short_description=p3@RIOK3 | ||
}} | }} |
Latest revision as of 23:35, 18 September 2015
Short description: | p3@RIOK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RIOK3_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 411bp_to_ENST00000339486, NM_003831, uc002kui.3, uc010dls.2, uc010xas.1_5end |
EntrezGene: | RIOK3 |
HGNC: | 11451 |
UniProt: | O14730B0YJ89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.83e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.83e-30 | 42 |
defensive cell | 2.62e-25 | 48 |
phagocyte | 2.62e-25 | 48 |
myeloid lineage restricted progenitor cell | 4.21e-20 | 66 |
monopoietic cell | 2.04e-18 | 59 |
monocyte | 2.04e-18 | 59 |
monoblast | 2.04e-18 | 59 |
promonocyte | 2.04e-18 | 59 |
macrophage dendritic cell progenitor | 1.55e-17 | 61 |
myeloid leukocyte | 1.89e-17 | 72 |
granulocyte monocyte progenitor cell | 1.54e-16 | 67 |
myeloid cell | 4.16e-12 | 108 |
common myeloid progenitor | 4.16e-12 | 108 |
hematopoietic lineage restricted progenitor cell | 1.03e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.84e-21 | 98 |
blood island | 4.84e-21 | 98 |
hemolymphoid system | 5.78e-18 | 108 |
bone marrow | 1.04e-14 | 76 |
skeletal element | 4.08e-14 | 90 |
bone element | 5.37e-13 | 82 |
skeletal system | 9.13e-12 | 100 |
immune system | 2.95e-11 | 93 |
blood | 3.60e-10 | 15 |
haemolymphatic fluid | 3.60e-10 | 15 |
organism substance | 3.60e-10 | 15 |
lateral plate mesoderm | 2.02e-07 | 203 |