FFCP PHASE1:Hg19::chr18:21033303..21033317,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8780 | |EntrezGene=8780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11451 | |HGNC=11451 | ||
|TSSclassifier=strong | |||
|UniProt=O14730 | |UniProt=O14730 | ||
|association_with_transcript=-7bp_to_AF013591_5end | |association_with_transcript=-7bp_to_AF013591_5end | ||
|cluster_id=chr18:21033303..21033317,+ | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_2_at_RIOK3_5end | |description=CAGE_peak_2_at_RIOK3_5end | ||
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|ontology_enrichment_celltype=CL:0002057!1.28e-21!42;CL:0000860!1.19e-19!45;CL:0000766!7.35e-19!76;CL:0002009!3.43e-16!65;CL:0000839!5.80e-16!70;CL:0002194!2.04e-15!63;CL:0000576!2.04e-15!63;CL:0000040!2.04e-15!63;CL:0000559!2.04e-15!63;CL:0000557!6.38e-15!71;CL:0000738!1.18e-12!140;CL:0002031!2.69e-11!124;CL:0002087!1.25e-10!119;CL:0000763!1.35e-09!112;CL:0000049!1.35e-09!112;CL:0000037!7.88e-08!172;CL:0000566!7.88e-08!172;CL:0002032!2.31e-07!165;CL:0000837!2.31e-07!165 | |ontology_enrichment_celltype=CL:0002057!1.28e-21!42;CL:0000860!1.19e-19!45;CL:0000766!7.35e-19!76;CL:0002009!3.43e-16!65;CL:0000839!5.80e-16!70;CL:0002194!2.04e-15!63;CL:0000576!2.04e-15!63;CL:0000040!2.04e-15!63;CL:0000559!2.04e-15!63;CL:0000557!6.38e-15!71;CL:0000738!1.18e-12!140;CL:0002031!2.69e-11!124;CL:0002087!1.25e-10!119;CL:0000763!1.35e-09!112;CL:0000049!1.35e-09!112;CL:0000037!7.88e-08!172;CL:0000566!7.88e-08!172;CL:0002032!2.31e-07!165;CL:0000837!2.31e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.24e-27;33!CL:0002057;1.24e-27;33!CL:0000473;1.57e-19;39!CL:0000234;1.57e-19;39!CL:0000576;4.44e-19;48!CL:0000766;1.05e-14;69!CL:0000094;3.28e-10;8!CL:0000081;6.66e-07;11 | |ontology_enrichment_celltype_v019=CL:0000860;1.24e-27;33!CL:0002057;1.24e-27;33!CL:0000473;1.57e-19;39!CL:0000234;1.57e-19;39!CL:0000576;4.44e-19;48!CL:0000766;1.05e-14;69!CL:0000094;3.28e-10;8!CL:0000081;6.66e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.16e-37,42;CL:0002057,7.16e-37,42;CL:0000473,2.63e-32,48;CL:0000234,2.63e-32,48;CL:0000766,1.58e-30,72;CL:0000839,5.98e-25,66;CL:0002009,7.54e-25,61;CL:0002194,1.83e-24,59;CL:0000576,1.83e-24,59;CL:0000040,1.83e-24,59;CL:0000559,1.83e-24,59;CL:0000557,1.14e-22,67;CL:0000738,9.82e-21,136;CL:0000763,2.24e-18,108;CL:0000049,2.24e-18,108;CL:0002087,6.16e-17,115;CL:0002031,1.12e-16,120;CL:0000037,6.65e-15,168;CL:0002032,4.82e-14,161;CL:0000837,4.82e-14,161;CL:0000988,3.29e-13,177;CL:0000094,1.44e-10,8;CL:0002393,9.04e-08,9;CL:0002397,9.04e-08,9;CL:0000081,3.80e-07,11;CL:0000134,6.75e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;3.79e-27;42 | |ontology_enrichment_development_v019=CL:0002057;3.79e-27;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.81e-19!102;UBERON:0003061!7.81e-19!102;UBERON:0002193!1.25e-17!112;UBERON:0002371!3.14e-13!80;UBERON:0001474!1.56e-11!86;UBERON:0002405!1.70e-09!115;UBERON:0004765!4.69e-09!101;UBERON:0001434!4.69e-09!101;UBERON:0000178!6.15e-08!15;UBERON:0000179!6.15e-08!15;UBERON:0000463!6.15e-08!15 | |ontology_enrichment_uberon=UBERON:0002390!7.81e-19!102;UBERON:0003061!7.81e-19!102;UBERON:0002193!1.25e-17!112;UBERON:0002371!3.14e-13!80;UBERON:0001474!1.56e-11!86;UBERON:0002405!1.70e-09!115;UBERON:0004765!4.69e-09!101;UBERON:0001434!4.69e-09!101;UBERON:0000178!6.15e-08!15;UBERON:0000179!6.15e-08!15;UBERON:0000463!6.15e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.41e-13;15!UBERON:0000179;8.41e-13;15!UBERON:0000463;8.41e-13;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;8.41e-13;15!UBERON:0000179;8.41e-13;15!UBERON:0000463;8.41e-13;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.19e-28,98;UBERON:0003061,8.19e-28,98;UBERON:0002193,9.67e-26,108;UBERON:0002371,6.80e-21,76;UBERON:0001474,2.37e-18,82;UBERON:0002405,1.97e-16,93;UBERON:0004765,2.28e-16,90;UBERON:0001434,2.13e-13,100;UBERON:0000178,5.84e-13,15;UBERON:0000179,5.84e-13,15;UBERON:0000463,5.84e-13,15;UBERON:0003081,1.05e-10,203 | |||
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|phase1_expression=1.81678379270557,0.428201047781966,1.69145284915165,1.0007329835313,0.446961094427288,0,0,0,0,0.491467873003018,0,0,0.527533956456907,0.247532705920093,0,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0.229240217243854,0.57470412614962,0.0787107813136792,2.75354993794233,4.22212337906934,2.78669021968937,0,0,0,0.92960640696362,0.568676929949686,0.587200878669695,4.43196326825502,5.61524452916397,2.38711957787437,0.223915474239924,0.647787332037959,0.515151135268373,2.90796477559129,4.53451132426571,2.18325655069035,3.71886459049095,3.28934310417461,3.40677007984614,3.45230870786581,1.7931249457037,1.18241114944293,2.41321976515633,1.29096936716765,2.70852973188684,4.70605848856512,5.45812300115692,3.37085226667627,1.83650335422542,2.56743221660875,4.47535988059329,2.30895910130701,2.59302754908121,2.13112375266347,4.06292934080018,2.8369261234557,1.24564449799115,2.00998932205395,3.12889751052121,2.6062661364614,2.42159801053347,4.41933163185078,2.21523671208619,1.47878700418359,1.70083439972035,0.419317291016752,0.898629049171961,0.600707571366025,0.64290234678832,1.14005097496499,1.39241674039363,1.27864907635244,0,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0.954053754535364,0.569212969109448,0.587237189370939,0,0,1.68152568894461,0.263384084775077,1.96709770113833,3.14408610199332,1.23360899399706,0.501559486172034,0.32592226663359,0.946895611469467,0,0.557052284425868,0.589211814949674,0.886135578334485,0.541607727530031,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0.339928028092699,0.766440987203842,0.68725489096526,0.253019692019503,0,0,0,0.150575119077773,0,0,0.236777252044017,0,2.41928091869679,5.34880391567015,3.33096128930438,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.579386075843295,0.795285947051099,0,0.0945348171640679,0,0.527008714158756,0.458426764241994,0,0.370784442784429,0.97364218096405,1.39303789839414,0.531831842075461,0.953962497221368,0.571994910780128,0,0.993812036833525,0,0.694281003215189,0,0.838998872419812,0.550236083880135,0.835979866147242,0.516833518338658,0.35576626268671,1.67360306382335,1.20848795132744,0.760272105718513,0.488124115096339,0.367663080345869,0,0.535798369704479,0,0.450445921933289,0,0.949265659568129,0.366403487860815,2.63560834872127,3.87780264148325,0,0.496971951695318,0.379891534993739,3.44263870114369,0.286836620748814,0,0.560677600142307,0,0.98667019366864,0,0.404132016209064,0,0,0,0,0,0,0.597794722207204,0.117434498643765,0.161872944368132,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.600952235626387,0.226864366320042,1.25572744982203,0.213557388818567,0.635795703478686,0.600182192168805,0.206105058476878,1.03056216018252,0.558350568994769,1.5189869901714,0.68205903612839,0.757301322732344,0.552299391853796,0,1.77504796258307,0.302256294682921,0.339121184620975,2.89891279744945,1.36373060295417,2.29443676311203,0,0,0.348581828608555,0.518305275076852,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0,0.118306800039844,0.505754070234305,0.482022059766964,0.992645754591546,0.871517776369625,0.237270619111097,0.674156540800822,0.392442930250692,0.769494313892781,0,0,0,0,2.53510069643662,0,0.590789906681404,0,0.245976877086227,1.02940686179115,0.878002283269004,1.1240175325762,0.201057944823262,0.185176890317059,0.325808305310325,0,0,0.231860809950154,0.939269553886573,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0.702012795417713,0.297262324577456,0.93733833986777,1.17587489739202,0.850650583454319,1.25381931783988,0.871901815541886,0,1.47798971368783,0.176096868026452,0.207328115540772,0.288239906833923,0.37872730027914,0.253991577168676,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.4400297149257,1.03417372606222,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0,0,0.65147236858747,0.710783897485092,0,0.602878754119172,0.871533458600294,1.79951384127703,0,1.50677127429638,0,0.718874566474748,0,0,1.44781306667579,0.410952645100767,0.716243852959582,0.224170287987055,2.1673383622212,4.9594342217689,5.26206448746968,0,1.30139853857622,0.773288812777695,0,0,1.49801404789436,2.99161459204025,2.48649308061621,0.12269149171914,0,0,0.831883446123229,0.535286966391485,0,0.117141414992713,0.601892199455438,2.27407504055985,0,0,0,0.0868836144680828,0,0,2.27444828735176,2.80428461064202,1.70764092485511,0.303127571446259,0,0,2.23297027036899,1.2276957863045,0.280660094433074,1.28139149255701,2.55853624533352,0.482561763430822,0,0.154209693802656,0.710246901252508,0,0.519254429183621,0.232420756919918,0.362578348774867,0.40101294060657,1.38121483403844,0.229628896329213,0.364182336013434,0.262248829918848,0.451199612907412,0.462092022626489,0,0,0.633309773357254,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0,8.33187531254551,5.49014447152291,0.256450125116389,0,0.650756789328606,0.721287081534056,0.0915694648183434,0.165018999841176,0.574265537996172,0.650060246036521,1.6068392984416,0.290012154876366,0.308097234229289,0.15350367472613,0.4135097174535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| ||
|short_description=p2@RIOK3 | |short_description=p2@RIOK3 | ||
}} | }} |
Latest revision as of 23:37, 18 September 2015
Short description: | p2@RIOK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RIOK3_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -7bp_to_AF013591_5end |
EntrezGene: | RIOK3 |
HGNC: | 11451 |
UniProt: | O14730 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.16e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.16e-37 | 42 |
defensive cell | 2.63e-32 | 48 |
phagocyte | 2.63e-32 | 48 |
myeloid leukocyte | 1.58e-30 | 72 |
myeloid lineage restricted progenitor cell | 5.98e-25 | 66 |
macrophage dendritic cell progenitor | 7.54e-25 | 61 |
monopoietic cell | 1.83e-24 | 59 |
monocyte | 1.83e-24 | 59 |
monoblast | 1.83e-24 | 59 |
promonocyte | 1.83e-24 | 59 |
granulocyte monocyte progenitor cell | 1.14e-22 | 67 |
leukocyte | 9.82e-21 | 136 |
myeloid cell | 2.24e-18 | 108 |
common myeloid progenitor | 2.24e-18 | 108 |
nongranular leukocyte | 6.16e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 1.12e-16 | 120 |
hematopoietic stem cell | 6.65e-15 | 168 |
hematopoietic oligopotent progenitor cell | 4.82e-14 | 161 |
hematopoietic multipotent progenitor cell | 4.82e-14 | 161 |
hematopoietic cell | 3.29e-13 | 177 |
granulocyte | 1.44e-10 | 8 |
intermediate monocyte | 9.04e-08 | 9 |
CD14-positive, CD16-positive monocyte | 9.04e-08 | 9 |
blood cell | 3.80e-07 | 11 |
mesenchymal cell | 6.75e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.19e-28 | 98 |
blood island | 8.19e-28 | 98 |
hemolymphoid system | 9.67e-26 | 108 |
bone marrow | 6.80e-21 | 76 |
bone element | 2.37e-18 | 82 |
immune system | 1.97e-16 | 93 |
skeletal element | 2.28e-16 | 90 |
skeletal system | 2.13e-13 | 100 |
blood | 5.84e-13 | 15 |
haemolymphatic fluid | 5.84e-13 | 15 |
organism substance | 5.84e-13 | 15 |
lateral plate mesoderm | 1.05e-10 | 203 |