FFCP PHASE1:Hg19::chr15:74220265..74220295,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100287616 | |EntrezGene=100287616 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_NR_040070_5end | |association_with_transcript=5bp_to_NR_040070_5end | ||
|cluster_id=chr15:74220265..74220295,- | |||
|description=CAGE_peak_1_at_LOC100287616_5end | |description=CAGE_peak_1_at_LOC100287616_5end | ||
|id=chr15:74220265..74220295,- | |id=chr15:74220265..74220295,- | ||
|ontology_enrichment_celltype=CL:0000055!2.50e-31!180;CL:0000183!4.14e-12!59;CL:0000057!5.23e-12!75;CL:0000680!4.11e-11!57;CL:0000056!4.11e-11!57;CL:0000355!4.11e-11!57;CL:0000393!5.48e-11!60;CL:0000211!5.48e-11!60;CL:0000187!1.58e-10!54;CL:0000095!1.58e-09!17;CL:0000123!1.58e-09!17;CL:0000133!3.92e-09!59;CL:0002319!4.11e-09!25;CL:0000243!6.96e-09!15;CL:0000125!6.96e-09!15;CL:0000030!6.96e-09!15;CL:0000339!6.96e-09!15;CL:0000222!2.53e-08!119;CL:0002321!5.14e-08!248;CL:0000220!1.23e-07!246;CL:0000192!2.34e-07!42;CL:0000514!2.34e-07!42;CL:0000333!2.97e-07!41;CL:0000221!3.09e-07!71;CL:0000359!3.95e-07!32 | |ontology_enrichment_celltype=CL:0000055!2.50e-31!180;CL:0000183!4.14e-12!59;CL:0000057!5.23e-12!75;CL:0000680!4.11e-11!57;CL:0000056!4.11e-11!57;CL:0000355!4.11e-11!57;CL:0000393!5.48e-11!60;CL:0000211!5.48e-11!60;CL:0000187!1.58e-10!54;CL:0000095!1.58e-09!17;CL:0000123!1.58e-09!17;CL:0000133!3.92e-09!59;CL:0002319!4.11e-09!25;CL:0000243!6.96e-09!15;CL:0000125!6.96e-09!15;CL:0000030!6.96e-09!15;CL:0000339!6.96e-09!15;CL:0000222!2.53e-08!119;CL:0002321!5.14e-08!248;CL:0000220!1.23e-07!246;CL:0000192!2.34e-07!42;CL:0000514!2.34e-07!42;CL:0000333!2.97e-07!41;CL:0000221!3.09e-07!71;CL:0000359!3.95e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000095;3.79e-10;17!CL:0000243;1.51e-09;15!CL:0000125;1.51e-09;15!CL:0002319;4.57e-09;25!CL:0000359;7.80e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.33e-12,76;CL:0000680,1.22e-11,58;CL:0000056,1.22e-11,58;CL:0000355,1.22e-11,58;CL:0000393,2.89e-11,61;CL:0000211,2.89e-11,61;CL:0000187,5.25e-11,55;CL:0000095,3.32e-10,17;CL:0000123,3.32e-10,17;CL:0000133,6.11e-10,59;CL:0000243,1.66e-09,15;CL:0000125,1.66e-09,15;CL:0000030,1.66e-09,15;CL:0000339,1.66e-09,15;CL:0002319,3.36e-09,25;CL:0000333,2.03e-08,41;CL:0000192,1.32e-07,43;CL:0000514,1.32e-07,43;CL:0000222,1.62e-07,121;CL:0000359,1.68e-07,32;CL:0000221,3.11e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000339;1.51e-09;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.25e-11!83;UBERON:0002329!7.25e-11!83;UBERON:0003077!7.25e-11!83;UBERON:0003059!7.25e-11!83;UBERON:0007282!7.25e-11!83;UBERON:0009618!7.25e-11!83;UBERON:0007285!7.25e-11!83;UBERON:0004290!1.13e-10!70;UBERON:0000486!1.51e-09!82;UBERON:0005256!3.35e-09!143;UBERON:0001134!4.00e-09!61;UBERON:0002036!4.00e-09!61;UBERON:0003082!4.00e-09!61;UBERON:0002385!7.13e-09!63;UBERON:0001015!7.13e-09!63;UBERON:0000383!7.13e-09!63;UBERON:0002100!2.86e-07!216 | |ontology_enrichment_uberon=UBERON:0000914!7.25e-11!83;UBERON:0002329!7.25e-11!83;UBERON:0003077!7.25e-11!83;UBERON:0003059!7.25e-11!83;UBERON:0007282!7.25e-11!83;UBERON:0009618!7.25e-11!83;UBERON:0007285!7.25e-11!83;UBERON:0004290!1.13e-10!70;UBERON:0000486!1.51e-09!82;UBERON:0005256!3.35e-09!143;UBERON:0001134!4.00e-09!61;UBERON:0002036!4.00e-09!61;UBERON:0003082!4.00e-09!61;UBERON:0002385!7.13e-09!63;UBERON:0001015!7.13e-09!63;UBERON:0000383!7.13e-09!63;UBERON:0002100!2.86e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.54e-11,78;UBERON:0002329,5.43e-11,71;UBERON:0003059,5.43e-11,71;UBERON:0007282,5.43e-11,71;UBERON:0004290,5.43e-11,71;UBERON:0009618,5.43e-11,71;UBERON:0007524,6.77e-11,73;UBERON:0003077,1.58e-10,72;UBERON:0007285,1.58e-10,72;UBERON:0003104,6.93e-10,160;UBERON:0009142,6.93e-10,160;UBERON:0000486,8.92e-10,83;UBERON:0001134,1.38e-09,62;UBERON:0002036,1.38e-09,62;UBERON:0003082,1.38e-09,62;UBERON:0002385,3.24e-09,64;UBERON:0001015,3.24e-09,64;UBERON:0000383,3.24e-09,64;UBERON:0005256,3.18e-07,122 | |||
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| ||
|short_description=p1@LOC100287616 | |short_description=p1@LOC100287616 | ||
}} | }} |
Latest revision as of 00:05, 19 September 2015
Short description: | p1@LOC100287616 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100287616_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_NR_040070_5end |
EntrezGene: | LOC100287616 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.33e-12 | 76 |
muscle precursor cell | 1.22e-11 | 58 |
myoblast | 1.22e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.22e-11 | 58 |
electrically responsive cell | 2.89e-11 | 61 |
electrically active cell | 2.89e-11 | 61 |
muscle cell | 5.25e-11 | 55 |
neuron associated cell | 3.32e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 3.32e-10 | 17 |
neurectodermal cell | 6.11e-10 | 59 |
glial cell (sensu Vertebrata) | 1.66e-09 | 15 |
glial cell | 1.66e-09 | 15 |
glioblast | 1.66e-09 | 15 |
glioblast (sensu Vertebrata) | 1.66e-09 | 15 |
neural cell | 3.36e-09 | 25 |
migratory neural crest cell | 2.03e-08 | 41 |
smooth muscle cell | 1.32e-07 | 43 |
smooth muscle myoblast | 1.32e-07 | 43 |
mesodermal cell | 1.62e-07 | 121 |
vascular associated smooth muscle cell | 1.68e-07 | 32 |
ectodermal cell | 3.11e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.54e-11 | 78 |
somite | 5.43e-11 | 71 |
presomitic mesoderm | 5.43e-11 | 71 |
presumptive segmental plate | 5.43e-11 | 71 |
dermomyotome | 5.43e-11 | 71 |
trunk paraxial mesoderm | 5.43e-11 | 71 |
dense mesenchyme tissue | 6.77e-11 | 73 |
paraxial mesoderm | 1.58e-10 | 72 |
presumptive paraxial mesoderm | 1.58e-10 | 72 |
mesenchyme | 6.93e-10 | 160 |
entire embryonic mesenchyme | 6.93e-10 | 160 |
multilaminar epithelium | 8.92e-10 | 83 |
skeletal muscle tissue | 1.38e-09 | 62 |
striated muscle tissue | 1.38e-09 | 62 |
myotome | 1.38e-09 | 62 |
muscle tissue | 3.24e-09 | 64 |
musculature | 3.24e-09 | 64 |
musculature of body | 3.24e-09 | 64 |
trunk mesenchyme | 3.18e-07 | 122 |