FFCP PHASE1:Hg19::chr8:72274355..72274372,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:72274355..72274372,- to FFCP PHASE1:Hg19::chr8:72274355..72274372,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2138 | |EntrezGene=2138 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3519 | |HGNC=3519 | ||
|TSSclassifier=strong | |||
|UniProt=E7EQM5 | |UniProt=E7EQM5 | ||
|association_with_transcript=0bp_to_ENST00000388741_5end | |||
|cluster_id=chr8:72274355..72274372,- | |||
|coexpression_cluster_id=C4770 | |||
|description=CAGE_peak_4_at_EYA1_5end | |||
|id=chr8:72274355..72274372,- | |||
|ontology_enrichment_celltype=CL:0000062!2.59e-07!11;CL:0000375!2.59e-07!11;CL:0000335!2.59e-07!11;CL:0002552!3.24e-07!5;CL:0000035!5.67e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0002552;1.79e-18;5!CL:0000062;6.51e-14;9!CL:0002549;2.78e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,1.31e-18,5;CL:0000062,2.92e-11,11;CL:0000375,2.92e-11,11;CL:0000335,2.92e-11,11;CL:0002549,3.01e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000335;2.92e-11;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;6.03e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,5.85e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000153!2.28e-11!129;UBERON:0007811!2.28e-11!129;UBERON:0000033!3.59e-10!123;UBERON:0002616!3.79e-10!59;UBERON:0000955!2.10e-09!69;UBERON:0006238!2.10e-09!69;UBERON:0000073!6.10e-09!94;UBERON:0001016!6.10e-09!94;UBERON:0001017!6.81e-09!82;UBERON:0005743!9.28e-09!86;UBERON:0000475!9.69e-09!365;UBERON:0001049!4.67e-08!57;UBERON:0005068!4.67e-08!57;UBERON:0006241!4.67e-08!57;UBERON:0007135!4.67e-08!57;UBERON:0000481!1.31e-07!347;UBERON:0000924!2.17e-07!173;UBERON:0006601!2.17e-07!173;UBERON:0004121!4.85e-07!169;UBERON:0002780!6.16e-07!41;UBERON:0001890!6.16e-07!41;UBERON:0006240!6.16e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0001828;1.99e-11;8!UBERON:0003296;2.21e-08;4!UBERON:0010133;2.21e-08;4!UBERON:0005629;2.78e-08;2!UBERON:0005358;2.78e-08;2!UBERON:0001886;2.78e-08;2!UBERON:0004086;2.78e-08;2!UBERON:0005282;2.78e-08;2!UBERON:0005281;2.78e-08;2!UBERON:0000007;6.58e-08;2!UBERON:0005284;5.31e-07;5!UBERON:0003729;6.81e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001828,1.65e-11,8;UBERON:0003296,1.48e-08,4;UBERON:0010133,1.48e-08,4;UBERON:0000007,2.51e-08,2;UBERON:0005629,3.01e-08,2;UBERON:0005358,3.01e-08,2;UBERON:0001886,3.01e-08,2;UBERON:0004086,3.01e-08,2;UBERON:0005282,3.01e-08,2;UBERON:0005281,3.01e-08,2;UBERON:0003729,6.10e-07,13;UBERON:0005284,6.64e-07,5 | |||
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|phase1_expression=0.54503513781167,0.214100523890983,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.369363174230364,0.408001382488506,0.940364164434263,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.472674085820339,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14734648299525,0,0,0,0,0.933633106199299,0,0,2.72443369760877,1.15235184896,0,0.312160076830321,0.570471821544449,0,0,0,0,1.22492502752936,1.22834317311768,2.58314452939414,3.56400857184616,2.96720315134268,0,0,0,0.750711119231785,0.554128230968366,2.19488810440419,0,1.35214253015937,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672786506072164,0.43596006883328,0.8800594298514,0,3.57656445851882,0,0,0,0.514414748524284,0,0.799266537048298,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.61642896765115,0.895304816199478,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0.468565659970853,1.20378439891088,2.27407504055985,1.03473071292505,0,0.184369168541703,0.695068915744663,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,1.60740227430449,2.54927635209404,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46511143709349,1.32015199872941,0,0,0,0.580024309752732,0.462145851343933,0.307007349452259,0,3.33002759091648,1.16013355131383,0.767039646744908,0.712256285173899,0.661139661443912,0,0.765676274967505,0.10115778085555,0,0,0,0,1.06461206063404,0,0,0,1.116475108079,0,0.190630193923825,0,0,0,0,1.2591072030832,1.09814811894422,0.589062011728432,0,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,1.41904425628239,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,2.67140892054974,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0.690503839458535,0,1.11136990144637,0,0,0,0,0,0,0,0.254253650292766,0,0.344743373241465,1.16641845353302,0.347249989866585,0,1.5677537021303,0,0,0,0.219385397153973,0,0,1.00035336054936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0.802577647298789,0,0,0.19566461893209,0,0,0,0.61214552326098,8.71974798873134,0,0.103688191397247,0,0,0,0,0,0,0,0,0.522355239482415,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0.137041924646751,0.19871461170299,0.126621591911757,0,0.64127056201227,0,0,0,0,0,0,0,0,0,0,2.44795722327172,6.35691297783342,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,3.38693328263138,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0.629455057619977,0.528001682597033,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.566560457600628,0,0,0.258565912723101,0.13223260174269,0,1.40963004463334,0,0,0,0,1.18566979138767,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0,0.18628920882415,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0.934853239388898,0,0.189403005275089,1.0062716070103,0,0,0,0.15543720058278,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,1.24415452006595,0.76736622782191,0,0,1.20130602011215,0.678930119816101,0,0.247871528518004,1.11728983594649,0,0,0,0,0,1.41304295212211,1.41696576325585,0.319267718114302,0.205116364240755,0.504143392443436,0,0,0,0.196295437002051,0,0,0,0.381382095467167,0,3.1826595538604,0,1.0085253435176,0,0,0,0,0.202612753855184,0,0,0.19024743058172,0,0,2.48105589194647,0,0.511049710558381,1.07140367175657,0.336283722218824,1.82089681270989,1.36597314810779,0,0.345701962667338,1.02892805662451,0.271878931907327,0,0,0,0.39246546425257,0.471346769748006,0,0.913158720509496,0,1.43325506366115,1.57248397188644,0,0,0.347716544605159,3.20684545892101,0,0.3414369541879,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.356760272332706,0.22589216407792,0.659643100472575,0,0,0,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0,1.29923502702408,0,0,0.320965466756673,0,0,0.143339583151451,0.157771562193185,0.271965960763659,0.436350690340377,0,0,0.462175628631418,0,0,0.655593431782173,0,0.305966489225945,0,0,0,0,0,0,0,0.213233981900981,0.476128862927481,0.258355639344024,0.869046000142011,0,0,0,0.653150243690884,0,0.0673520530145875,0.717222053926764,0.332660356546013,0.162806537221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| ||
|short_description=p4@EYA1 | |||
}} | }} |
Latest revision as of 00:43, 19 September 2015
Short description: | p4@EYA1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EYA1_5end |
Coexpression cluster: | C4770_Fibroblast_dura_glioblastoma_glioma_neuroblastoma_small_osteosarcoma |
Association with transcript: | 0bp_to_ENST00000388741_5end |
EntrezGene: | EYA1 |
HGNC: | 3519 |
UniProt: | E7EQM5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 1.31e-18 | 5 |
osteoblast | 2.92e-11 | 11 |
osteoprogenitor cell | 2.92e-11 | 11 |
mesenchyme condensation cell | 2.92e-11 | 11 |
fibroblast of choroid plexus | 3.01e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
gingiva | 1.65e-11 | 8 |
gland of diencephalon | 1.48e-08 | 4 |
neuroendocrine gland | 1.48e-08 | 4 |
pituitary gland | 2.51e-08 | 2 |
vascular plexus | 3.01e-08 | 2 |
ventricle of nervous system | 3.01e-08 | 2 |
choroid plexus | 3.01e-08 | 2 |
brain ventricle | 3.01e-08 | 2 |
ventricular system of brain | 3.01e-08 | 2 |
ventricular system of central nervous system | 3.01e-08 | 2 |
mouth mucosa | 6.10e-07 | 13 |
brain vasculature | 6.64e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
teratoma | 5.85e-09 | 2 |