FFCP PHASE1:Hg19::chr15:75639688..75639732,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79661 | |EntrezGene=79661 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18448 | |HGNC=18448 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-246bp_to_uc002bae.2_5end | |association_with_transcript=-246bp_to_uc002bae.2_5end | ||
|cluster_id=chr15:75639688..75639732,+ | |||
|coexpression_cluster_id=C179 | |coexpression_cluster_id=C179 | ||
|description=CAGE_peak_4_at_NEIL1_5end | |description=CAGE_peak_4_at_NEIL1_5end | ||
|id=chr15:75639688..75639732,+ | |id=chr15:75639688..75639732,+ | ||
|ontology_enrichment_celltype=CL:0000542!2.70e-16!53;CL:0000051!2.70e-16!53;CL:0000838!7.78e-16!52;CL:0000236!4.31e-15!14;CL:0000945!7.01e-13!24;CL:0000826!7.01e-13!24;CL:0000738!4.61e-12!140;CL:0000037!2.84e-11!172;CL:0000566!2.84e-11!172;CL:0000988!9.40e-11!182;CL:0002087!4.40e-10!119;CL:0002032!4.18e-09!165;CL:0000837!4.18e-09!165;CL:0002031!2.09e-08!124;CL:0000791!7.91e-07!18;CL:0000789!7.91e-07!18;CL:0002420!7.91e-07!18;CL:0002419!7.91e-07!18;CL:0000790!7.91e-07!18 | |ontology_enrichment_celltype=CL:0000542!2.70e-16!53;CL:0000051!2.70e-16!53;CL:0000838!7.78e-16!52;CL:0000236!4.31e-15!14;CL:0000945!7.01e-13!24;CL:0000826!7.01e-13!24;CL:0000738!4.61e-12!140;CL:0000037!2.84e-11!172;CL:0000566!2.84e-11!172;CL:0000988!9.40e-11!182;CL:0002087!4.40e-10!119;CL:0002032!4.18e-09!165;CL:0000837!4.18e-09!165;CL:0002031!2.09e-08!124;CL:0000791!7.91e-07!18;CL:0000789!7.91e-07!18;CL:0002420!7.91e-07!18;CL:0002419!7.91e-07!18;CL:0000790!7.91e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000236;9.64e-43;13!CL:0000945;2.14e-33;24!CL:0000542;9.87e-23;53!CL:0000226;5.65e-10;3!CL:0000842;5.65e-10;3!CL:0000624;2.91e-08;6!CL:0002087;5.25e-08;104!CL:0000791;2.03e-07;18!CL:0000789;2.03e-07;18!CL:0002419;2.03e-07;18!CL:0000815;5.24e-07;2!CL:0000792;5.24e-07;2!CL:0002677;5.24e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.79e-39,14;CL:0000838,6.25e-34,52;CL:0000945,1.97e-33,24;CL:0000826,1.97e-33,24;CL:0000542,3.69e-33,53;CL:0000051,3.69e-33,53;CL:0002087,3.90e-22,115;CL:0000738,9.71e-19,136;CL:0002031,1.48e-16,120;CL:0000037,1.32e-14,168;CL:0000988,1.98e-13,177;CL:0002032,2.19e-11,161;CL:0000837,2.19e-11,161;CL:0000226,4.01e-10,3;CL:0000842,4.01e-10,3;CL:0000624,1.63e-08,6;CL:0000791,1.42e-07,18;CL:0000789,1.42e-07,18;CL:0002420,1.42e-07,18;CL:0002419,1.42e-07,18;CL:0000790,1.42e-07,18;CL:0000815,4.94e-07,2;CL:0000792,4.94e-07,2;CL:0002677,4.94e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;9.87e-23;53!CL:0000790;2.03e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.04e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.00e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.50e-09!115;UBERON:0002020!3.02e-07!34;UBERON:0003528!3.02e-07!34;UBERON:0001049!3.82e-07!57;UBERON:0005068!3.82e-07!57;UBERON:0006241!3.82e-07!57;UBERON:0007135!3.82e-07!57;UBERON:0001869!6.02e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!1.50e-09!115;UBERON:0002020!3.02e-07!34;UBERON:0003528!3.02e-07!34;UBERON:0001049!3.82e-07!57;UBERON:0005068!3.82e-07!57;UBERON:0006241!3.82e-07!57;UBERON:0007135!3.82e-07!57;UBERON:0001869!6.02e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0004177;4.22e-11;5!UBERON:0005057;4.22e-11;5!UBERON:0002390;3.43e-09;32!UBERON:0002370;3.34e-08;2!UBERON:0005058;3.34e-08;2!UBERON:0009113;3.34e-08;2!UBERON:0000178;8.50e-07;15!UBERON:0000179;8.50e-07;15!UBERON:0000463;8.50e-07;15!UBERON:0002193;8.96e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,6.76e-08,7;UBERON:0005057,6.76e-08,7;UBERON:0000178,7.04e-07,15;UBERON:0000179,7.04e-07,15;UBERON:0000463,7.04e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.77408061658038,0,0.30120591877825,0,17.8949233340497,2.55904618477359,0.587200878669695,0,0.401088894940283,1.08505435357926,0.447830948479849,0,0,0,1.13362783106643,0.242584061187816,0,0.411167888021826,0,0,0.768482119587302,0,0,0.645484683583826,0,0,0.818718450173537,0,0,1.28371610830437,0,0,0,0.426224750532694,0.290209238628584,0.56738522469114,0,0.251248665256743,1.0429658368404,0,0.605399502633369,1.10483290796269,0,0,0,0,0,0,0,0,0,0,5.27988733383968,8.19207916893197,4.44754626931777,4.69403244823158,7.60752375368424,6.8970292794538,5.2883589822789,8.58648379081828,38.7064818994425,27.6001479004341,27.9059456531417,6.60856642895129,1.68152568894461,4.21414535640123,1.96709770113833,0.786021525498329,1.64481199199607,1.5046784585161,1.62961133316795,2.8406868344084,0,0.445641827540694,1.17842362989935,1.10766947291811,0,1.0247305578054,0.130059347559878,0,0,0,1.4828656316206,1.60524496853828,2.09071047609954,0.339928028092699,0.766440987203842,0.68725489096526,1.01207876807801,0.637130828648193,0,0,0.451725357233318,0.895906278080929,0,0.236777252044017,0,1.61285394579786,1.33720097891754,2.02754165435919,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0.33472061276467,0,0.760272105718513,0.976248230192678,0,0,0.0892997282840798,0,0,0,0,0.732806975721629,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.126995788584338,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,2.1673383622212,0.862510299438069,2.82354679815446,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,1.2942852049117,1.921096040462,0,0,0,0.248107807818777,0.460385919864187,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0.308061348417659,0.784349769176855,1.46139224653261,0,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,0.569647187174163,0.714695326373367,1.64544909234478,0,1.62009431171434,0.79312517629427,0.213648142254946,0,0,0.371606350251437,2.16403819464667,0,0,0,0,0,0.324621940274555,0,0.228234679033192,0,0,0,0,0.201799707191048,0.851692475380653,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,11.6039244523082,1.51159648712566,0.102268682502155,0.123084805461069,0,0.179736702294654,0,0,0.591860433821602,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0.762760950878299,0,0.344743373241465,0.291604613383254,0,0.885741385813839,0.60298219312704,1.52581736317083,0.774054819518572,0,0,0,0,0.230850775511391,0,0.23056390438806,0.359030577639089,0,0,0,0,0,0.31396051279005,0.166211681900156,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,4.56136973039165,0.19566461893209,0,0.394584402849391,1.20990716048664,0,0.063186579628488,0.450970258243478,0.207376382794494,0.664653872707185,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.253243183823515,0,0,0.213452994739353,0.19980960958213,0,0,0.857974989309823,0,0.49701014226173,0,0,0,0,0,0,0.547621515567972,1.27746588066972,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.335917362433631,0,0,0,0.247247575143499,0.0674035438541849,0.0984274815147488,0,0,0.817220436669454,0,0,0,0.2249738915515,0.77380195455795,0.242998226632099,0,0,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,1.32506888912221,0.517131825446202,0.66116300871345,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,16.0766229862783,0,0,0,0,0,0.157054096250234,0,0.366078794705889,0.500763722825999,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0,0,0,0.468334905806882,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0.521745061811734,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0.163565394255844,0,0,0.211312123358627,0,0.320075189082423,0,0,0,0,0,0.255788742607303,0,0,0.218419276384028,0,0.425149840203366,0.495743057036009,0,0,2.3658523500376,0,0,0,0.128458450192919,0,0.478901577171454,0,0.504143392443436,0.207471757392654,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0.523813388962845,0,0.295712172434091,0.135075169236789,0.781078098613847,0.826747186004736,0.126831620387814,0.546974809018219,0,0,0.351742488719241,0.127762427639595,0,0,0.606965604236632,0.227662191351298,0.0887023701626388,0.691403925334676,0,0.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| ||
|short_description=p4@NEIL1 | |short_description=p4@NEIL1 | ||
}} | }} |
Latest revision as of 03:35, 19 September 2015
Short description: | p4@NEIL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NEIL1_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | -246bp_to_uc002bae.2_5end |
EntrezGene: | NEIL1 |
HGNC: | 18448 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.79e-39 | 14 |
lymphoid lineage restricted progenitor cell | 6.25e-34 | 52 |
lymphocyte of B lineage | 1.97e-33 | 24 |
pro-B cell | 1.97e-33 | 24 |
lymphocyte | 3.69e-33 | 53 |
common lymphoid progenitor | 3.69e-33 | 53 |
nongranular leukocyte | 3.90e-22 | 115 |
leukocyte | 9.71e-19 | 136 |
hematopoietic lineage restricted progenitor cell | 1.48e-16 | 120 |
hematopoietic stem cell | 1.32e-14 | 168 |
hematopoietic cell | 1.98e-13 | 177 |
hematopoietic oligopotent progenitor cell | 2.19e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.19e-11 | 161 |
single nucleate cell | 4.01e-10 | 3 |
mononuclear cell | 4.01e-10 | 3 |
CD4-positive, alpha-beta T cell | 1.63e-08 | 6 |
mature alpha-beta T cell | 1.42e-07 | 18 |
alpha-beta T cell | 1.42e-07 | 18 |
immature T cell | 1.42e-07 | 18 |
mature T cell | 1.42e-07 | 18 |
immature alpha-beta T cell | 1.42e-07 | 18 |
regulatory T cell | 4.94e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.94e-07 | 2 |
naive regulatory T cell | 4.94e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 6.76e-08 | 7 |
immune organ | 6.76e-08 | 7 |
blood | 7.04e-07 | 15 |
haemolymphatic fluid | 7.04e-07 | 15 |
organism substance | 7.04e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.00e-08 | 10 |