FFCP PHASE1:Hg19::chr18:28742813..28742824,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:28742813..28742824,-
|short_description=p2@DSC1
|description=CAGE_peak_2_at_DSC1_5end
|association_with_transcript=0bp_to_ENST00000257197,ENST00000257198,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1823 | |EntrezGene=1823 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3035 | |HGNC=3035 | ||
|TSSclassifier=strong | |||
|UniProt=Q08554,Q9HB00 | |UniProt=Q08554,Q9HB00 | ||
|association_with_transcript=0bp_to_ENST00000257197,ENST00000257198,NM_004948,NM_024421,uc002kwm.2,uc002kwn.2_5end | |||
|cluster_id=chr18:28742813..28742824,- | |||
|coexpression_cluster_id=C202 | |||
|description=CAGE_peak_2_at_DSC1_5end | |||
|id=chr18:28742813..28742824,- | |||
|ontology_enrichment_celltype=CL:0000791!9.53e-28!18;CL:0000789!9.53e-28!18;CL:0002420!9.53e-28!18;CL:0002419!9.53e-28!18;CL:0000790!9.53e-28!18;CL:0000625!6.36e-26!11;CL:0000084!9.02e-19!25;CL:0000827!9.02e-19!25;CL:0000838!1.38e-10!52;CL:0000542!2.68e-10!53;CL:0000051!2.68e-10!53;CL:0000842!6.42e-08!3;CL:0000623!9.09e-08!3;CL:0000825!9.09e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000625;3.95e-41;11!CL:0000791;5.42e-41;18!CL:0000789;5.42e-41;18!CL:0002419;5.42e-41;18!CL:0000084;1.03e-28;25!CL:0000226;7.39e-14;3!CL:0000842;7.39e-14;3!CL:0001014;9.63e-11;2!CL:0001016;9.63e-11;2!CL:0000542;2.50e-08;53!CL:0000624;2.83e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,3.56e-41,11;CL:0000791,6.52e-41,18;CL:0000789,6.52e-41,18;CL:0002420,6.52e-41,18;CL:0002419,6.52e-41,18;CL:0000790,6.52e-41,18;CL:0000084,1.17e-28,25;CL:0000827,1.17e-28,25;CL:0000838,1.30e-16,52;CL:0000542,3.10e-16,53;CL:0000051,3.10e-16,53;CL:0000226,7.24e-14,3;CL:0000842,7.24e-14,3;CL:0001014,1.04e-10,2;CL:0001016,1.04e-10,2;CL:0000738,7.95e-09,136;CL:0002087,1.11e-08,115;CL:0002031,3.02e-07,120;CL:0000624,3.38e-07,6;CL:0000623,7.14e-07,3;CL:0000825,7.14e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.42e-41;18!CL:0000051;2.50e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.60e-17!15;UBERON:0000179!1.60e-17!15;UBERON:0000463!1.60e-17!15;UBERON:0007023!9.17e-11!115;UBERON:0001042!1.15e-07!10;UBERON:0009145!1.15e-07!10;UBERON:0003408!1.57e-07!10;UBERON:0006562!6.70e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.80e-28;15!UBERON:0000179;3.80e-28;15!UBERON:0000463;3.80e-28;15!UBERON:0002390;1.19e-11;32!UBERON:0001723;3.54e-07;3!UBERON:0001033;3.54e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.92e-28,15;UBERON:0000179,3.92e-28,15;UBERON:0000463,3.92e-28,15;UBERON:0001723,3.54e-07,3;UBERON:0001033,3.54e-07,3;UBERON:0010056,3.54e-07,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32761494250433,0.786021525498329,1.02800749499755,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,2.31842468588042,16.0149488215025,8.29376567078111,5.22677619024884,0.113309342697566,1.14966148080576,1.03088233644789,1.51811815211702,3.18565414324097,5.20866763085135,2.85135613334512,9.33565738282191,11.3908083927432,6.24653632761729,4.2619905367923,1.64225599384209,3.42731463482045,0.267440195783507,3.62061009706997,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52425656439839,0,1.20634766893957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97030760201927,0.431255149719035,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,2.80428461064202,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,1.70894156152249,4.76463550915578,2.87953591160336,4.53931317834902,2.16012574895246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.921482106297696,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.189932387867636,0,0,0,0,0,0.343609788497747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.27450393947851,9.2856234546954,0.121499113316049,6.70869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0,0,0,2.97726707033577,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,53.9182536214992,0,0,0,0,0,0,0,0,0,0,0,0,0,44.6854113614408,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0.917458566809082,0,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.124149428591716,0,0,0,3.70118471424834,3.08009970976753,0.404112318087525,0.0717222053926763,0,0,0,0,0,14.0784565442073,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p2@DSC1 | |||
}} | }} |
Latest revision as of 04:48, 19 September 2015
Short description: | p2@DSC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DSC1_5end |
Coexpression cluster: | C202_salivary_skin_penis_tongue_uterus_cervical_immature |
Association with transcript: | 0bp_to_ENST00000257197, ENST00000257198, NM_004948, NM_024421, uc002kwm.2, uc002kwn.2_5end |
EntrezGene: | DSC1 |
HGNC: | 3035 |
UniProt: | Q08554Q9HB00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 3.56e-41 | 11 |
mature alpha-beta T cell | 6.52e-41 | 18 |
alpha-beta T cell | 6.52e-41 | 18 |
immature T cell | 6.52e-41 | 18 |
mature T cell | 6.52e-41 | 18 |
immature alpha-beta T cell | 6.52e-41 | 18 |
T cell | 1.17e-28 | 25 |
pro-T cell | 1.17e-28 | 25 |
lymphoid lineage restricted progenitor cell | 1.30e-16 | 52 |
lymphocyte | 3.10e-16 | 53 |
common lymphoid progenitor | 3.10e-16 | 53 |
single nucleate cell | 7.24e-14 | 3 |
mononuclear cell | 7.24e-14 | 3 |
CD1a-positive Langerhans cell | 1.04e-10 | 2 |
immature CD1a-positive Langerhans cell | 1.04e-10 | 2 |
leukocyte | 7.95e-09 | 136 |
nongranular leukocyte | 1.11e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 3.02e-07 | 120 |
CD4-positive, alpha-beta T cell | 3.38e-07 | 6 |
natural killer cell | 7.14e-07 | 3 |
pro-NK cell | 7.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.92e-28 | 15 |
haemolymphatic fluid | 3.92e-28 | 15 |
organism substance | 3.92e-28 | 15 |
tongue | 3.54e-07 | 3 |
gustatory system | 3.54e-07 | 3 |
future tongue | 3.54e-07 | 3 |