FFCP PHASE1:Hg19::chr6:49604545..49604560,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6005 | |EntrezGene=6005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10006 | |HGNC=10006 | ||
|TSSclassifier=strong | |||
|UniProt=O43515,Q02094,E9PC36,F5H250 | |UniProt=O43515,Q02094,E9PC36,F5H250 | ||
|association_with_transcript=0bp_to_ENST00000229810,ENST00000371175,ENST00000418071,ENST00000539403_5end | |association_with_transcript=0bp_to_ENST00000229810,ENST00000371175,ENST00000418071,ENST00000539403_5end | ||
|cluster_id=chr6:49604545..49604560,- | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_1_at_RHAG_5end | |description=CAGE_peak_1_at_RHAG_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002150!4.89e-07!3;CL:0000861!4.89e-07!3 | |ontology_enrichment_celltype=CL:0002150!4.89e-07!3;CL:0000861!4.89e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000764;2.03e-13;2!CL:0000558;2.03e-13;2 | |ontology_enrichment_celltype_v019=CL:0000764;2.03e-13;2!CL:0000558;2.03e-13;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.03e-13,2;CL:0000765,2.03e-13,2;CL:0000050,2.03e-13,2;CL:0000038,2.03e-13,2;CL:0000558,2.03e-13,2;CL:0000547,2.03e-13,2;CL:0000549,2.03e-13,2;CL:0000550,2.03e-13,2;CL:0000552,2.03e-13,2;CL:0000763,3.55e-09,108;CL:0000049,3.55e-09,108 | |||
|ontology_enrichment_development_v019=UBERON:0004140;6.12e-07;1 | |ontology_enrichment_development_v019=UBERON:0004140;6.12e-07;1 | ||
|ontology_enrichment_disease=DOID:8692!3.39e-17!31;DOID:1036!1.67e-15!8;DOID:1240!9.69e-13!39;DOID:2531!9.75e-09!51;DOID:0060083!9.75e-09!51 | |ontology_enrichment_disease=DOID:8692!3.39e-17!31;DOID:1036!1.67e-15!8;DOID:1240!9.69e-13!39;DOID:2531!9.75e-09!51;DOID:0060083!9.75e-09!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.58e-29;31!DOID:1036;6.94e-27;8!DOID:1240;4.85e-18;39!DOID:2531;4.58e-12;51!DOID:0060083;4.58e-12;51!DOID:9119;2.23e-07;1!DOID:8552;2.67e-07;1 | |ontology_enrichment_disease_v019=DOID:8692;4.58e-29;31!DOID:1036;6.94e-27;8!DOID:1240;4.85e-18;39!DOID:2531;4.58e-12;51!DOID:0060083;4.58e-12;51!DOID:9119;2.23e-07;1!DOID:8552;2.67e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,7.75e-30,31;DOID:1036,6.94e-27,8;DOID:1240,3.65e-23,39;DOID:2531,4.42e-17,51;DOID:0060083,4.42e-17,51;DOID:9119,2.23e-07,1;DOID:8552,2.67e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.83e-15!115;UBERON:0000178!3.34e-09!15;UBERON:0000179!3.34e-09!15;UBERON:0000463!3.34e-09!15 | |ontology_enrichment_uberon=UBERON:0007023!2.83e-15!115;UBERON:0000178!3.34e-09!15;UBERON:0000179!3.34e-09!15;UBERON:0000463!3.34e-09!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.70e-13;15!UBERON:0000179;5.70e-13;15!UBERON:0000463;5.70e-13;15!UBERON:0002390;1.26e-09;32!UBERON:0002134;8.42e-07;1!UBERON:0005208;8.42e-07;1!UBERON:0004145;8.42e-07;1!UBERON:0005946;8.42e-07;1!UBERON:0005965;8.42e-07;1!UBERON:0002078;8.42e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0000178;5.70e-13;15!UBERON:0000179;5.70e-13;15!UBERON:0000463;5.70e-13;15!UBERON:0002390;1.26e-09;32!UBERON:0002134;8.42e-07;1!UBERON:0005208;8.42e-07;1!UBERON:0004145;8.42e-07;1!UBERON:0005946;8.42e-07;1!UBERON:0005965;8.42e-07;1!UBERON:0002078;8.42e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.34e-13,15;UBERON:0000179,5.34e-13,15;UBERON:0000463,5.34e-13,15;UBERON:0002134,8.18e-07,1;UBERON:0005208,8.18e-07,1;UBERON:0005946,8.18e-07,1;UBERON:0005965,8.18e-07,1;UBERON:0002078,8.18e-07,1 | |||
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| ||
|short_description=p1@RHAG | |short_description=p1@RHAG | ||
}} | }} |
Latest revision as of 04:50, 19 September 2015
Short description: | p1@RHAG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RHAG_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000229810, ENST00000371175, ENST00000418071, ENST00000539403_5end |
EntrezGene: | RHAG |
HGNC: | 10006 |
UniProt: | O43515Q02094E9PC36F5H250 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.03e-13 | 2 |
erythroblast | 2.03e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 2.03e-13 | 2 |
erythroid progenitor cell | 2.03e-13 | 2 |
reticulocyte | 2.03e-13 | 2 |
proerythroblast | 2.03e-13 | 2 |
basophilic erythroblast | 2.03e-13 | 2 |
polychromatophilic erythroblast | 2.03e-13 | 2 |
orthochromatic erythroblast | 2.03e-13 | 2 |
myeloid cell | 3.55e-09 | 108 |
common myeloid progenitor | 3.55e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 5.34e-13 | 15 |
haemolymphatic fluid | 5.34e-13 | 15 |
organism substance | 5.34e-13 | 15 |
tricuspid valve | 8.18e-07 | 1 |
right atrium valve | 8.18e-07 | 1 |
outflow tract of atrium | 8.18e-07 | 1 |
outflow part of right atrium | 8.18e-07 | 1 |
right cardiac atrium | 8.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.75e-30 | 31 |
chronic leukemia | 6.94e-27 | 8 |
leukemia | 3.65e-23 | 39 |
hematologic cancer | 4.42e-17 | 51 |
immune system cancer | 4.42e-17 | 51 |
acute myeloid leukemia | 2.23e-07 | 1 |
chronic myeloid leukemia | 2.67e-07 | 1 |