FFCP PHASE1:Hg19::chr2:192543721..192543742,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64859 | |EntrezGene=64859 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26232 | |HGNC=26232 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_uc002uta.2_5end | |association_with_transcript=5bp_to_uc002uta.2_5end | ||
|cluster_id=chr2:192543721..192543742,+ | |||
|description=CAGE_peak_5_at_OBFC2A_5end | |description=CAGE_peak_5_at_OBFC2A_5end | ||
|id=chr2:192543721..192543742,+ | |id=chr2:192543721..192543742,+ | ||
|ontology_enrichment_celltype=CL:0000766!8.41e-10!76;CL:0000557!6.88e-09!71;CL:0002009!7.52e-09!65;CL:0000839!3.29e-08!70;CL:0002076!5.11e-08!43;CL:0002194!5.33e-08!63;CL:0000576!5.33e-08!63;CL:0000040!5.33e-08!63;CL:0000559!5.33e-08!63;CL:0000763!2.10e-07!112;CL:0000049!2.10e-07!112 | |ontology_enrichment_celltype=CL:0000766!8.41e-10!76;CL:0000557!6.88e-09!71;CL:0002009!7.52e-09!65;CL:0000839!3.29e-08!70;CL:0002076!5.11e-08!43;CL:0002194!5.33e-08!63;CL:0000576!5.33e-08!63;CL:0000040!5.33e-08!63;CL:0000559!5.33e-08!63;CL:0000763!2.10e-07!112;CL:0000049!2.10e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000990;1.74e-12;8!CL:0000039;3.69e-10;7!CL:0000586;3.69e-10;7!CL:0000451;5.94e-10;10!CL:0000235;1.63e-08;6!CL:0000453;3.15e-08;5!CL:0000775;7.44e-08;3!CL:0002541;1.43e-07;3!CL:0000094;3.63e-07;8!CL:0000077;4.55e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,1.86e-12,8;CL:0000766,1.13e-10,72;CL:0000039,4.70e-10,7;CL:0000586,4.70e-10,7;CL:0000451,6.26e-10,10;CL:0000235,1.94e-08,6;CL:0000453,3.18e-08,5;CL:0000763,3.26e-08,108;CL:0000049,3.26e-08,108;CL:0000775,6.57e-08,3;CL:0000076,8.92e-08,63;CL:0002009,1.20e-07,61;CL:0002541,1.54e-07,3;CL:0000557,1.88e-07,67;CL:0000094,3.26e-07,8;CL:0000077,3.88e-07,19;CL:0002194,5.31e-07,59;CL:0000576,5.31e-07,59;CL:0000040,5.31e-07,59;CL:0000559,5.31e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.06e-07;10!UBERON:0005564;4.06e-07;10 | |||
|ontology_enrichment_disease=DOID:1749!2.45e-08!14 | |ontology_enrichment_disease=DOID:1749!2.45e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.44e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.46e-10,14;DOID:305,2.41e-08,106;DOID:0050687,5.69e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.55e-11!102;UBERON:0003061!4.55e-11!102;UBERON:0002193!1.17e-10!112;UBERON:0002371!9.74e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.06e-07;15!UBERON:0000179;1.06e-07;15!UBERON:0000463;1.06e-07;15!UBERON:0003124;1.43e-07;3!UBERON:0000920;1.43e-07;3!UBERON:0005631;4.43e-07;10!UBERON:0000158;4.43e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.13e-10,98;UBERON:0003061,3.13e-10,98;UBERON:0002193,1.32e-08,108;UBERON:0000178,6.83e-08,15;UBERON:0000179,6.83e-08,15;UBERON:0000463,6.83e-08,15;UBERON:0000920,1.54e-07,3 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,1.0007329835313,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0.672325146451775,1.20538905604795,0,0.487932798790507,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.314843125254717,0,0,0,0.919421224478927,0.6024118375565,0,0,0.426507697462265,0,0,0,0.217010870715852,1.11957737119962,1.29557466407592,1.54545340580512,0.436194716338694,0.755751887377619,0.727752183563449,0.464858073811369,0.411167888021826,0.619412741790207,0,0.768482119587302,0.236482229888585,0,1.29096936716765,1.35426486594342,1.12945403725563,1.36453075028923,1.12361742222542,1.22433556948361,0.641858054152187,1.27867425159808,0.659702600373432,0.797854630486527,0.426224750532694,0.580418477257168,1.13477044938228,0,0.75374599577023,0.521482918420201,0.434377689410233,0,0.368277635987565,0,0.422510572623884,0.212604299965044,0,0,0,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0.167186495390678,0,0,0,0.334231370655521,0,0.886135578334485,0.270803863765016,0.128091319725675,0.390178042679635,0,0.276350017785848,0,0,0,0,0.226618685395132,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.327447688744282,0,0,6.16640047943898,4.00498395788315,5.31831842075461,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,5.27121669744253,3.87780264148325,0.436094052142534,0,0.12663051166458,0.529636723252875,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0.919463387397059,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0.323292113637624,0,0.10075209822764,0.339121184620975,0.386521706326594,0,0.286804595389004,0,0.265059536642971,0.116193942869518,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,6.3953988042419,0,0.658501712451753,0,0.201057944823262,0.555530670951178,0,0,0,0,0,0.144366447761074,0,0,0,0,1.23108503043699,3.51006397708857,2.0808362720422,0.93733833986777,1.00789276919316,0.850650583454319,1.25381931783988,0.581267877027924,0,2.46331618947972,0.088048434013226,0.207328115540772,0.288239906833923,0,0.063497894292169,0,0,0,0.102827492703324,0.300343057843917,0.571652865261156,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,1.20575750823834,0,0.599837947092342,1.2162378064119,3.01354254859276,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0,0.215627574859517,0,0.254094624222463,0,0,0,0.637938751653163,4.49404214368309,5.9832291840805,9.11714129559278,0,0,0,0,0,0,0.35142424497814,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.413536052245775,0.215714200818617,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0.511707249066704,0,0,0,0.177561725313127,0.246381468041427,0.519254429183621,0.232420756919918,2.77976734060731,0.802025881213139,1.10497186723076,0.229628896329213,0,0.131124414959424,0,1.15523005656622,0,0,0.633309773357254,0,0.340187410553031,0.431831832204279,0,0,0,0.254876273045038,0.831076008928724,0,0,0.261435451024901,0,0,0,0.824328093181778,0,0,1.14853107599234,1.95018073810956,0,0,0.154048617114644,0,0,0.107420244868274,0,0,0,0.495854746082934,0.384380134730212,0.765676274967505,0.50578890427775,0,0.31481234683064,0,0,0,0.869932992075073,0.18532421910392,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0.539617372749944,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.288666338176536,0,0,1.22386941009813,0,0,0,0,4.05958087385735,3.0585488285695,5.12682468456746,1.90585420366231,0.822724546172388,1.29694662238543,3.7802200606668,1.58625035258854,0.320472213382419,0,0.980160863924127,0.557409525377156,0,0,0,0.199579371432817,0,0.211673582723883,0.324621940274555,0,0,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0,0,0.19538809540204,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,1.13654458722565,1.67121139316383,0.593929361665277,2.76444631889309,0,0.140669416410513,0.111308705022906,0.329607748453519,0.211125408127993,0,0.276283915531148,0,0,0.984678443688556,0,1.88723537409386,2.50629644545853,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0.0874599999961957,0,0.227586896570999,1.77977555204936,22.9296051314898,0,0.291604613383254,0,0,0,0,0,0,0,0.21787692703798,0.41827123283581,0,0,1.1528195219403,0,4.23724750495832,5.74202087517455,2.01514705484097,5.33034776018635,0,0,0,0,0,0.335643173951685,0.37950746544837,0,0.632994193584081,1.14262965711403,0.282706142867882,0.432777279484182,0,0.265372693510018,0.611030144933625,0,0.123563938946503,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0.150323419414493,0,0.664653872707185,0.330991955875499,0,0,0.853828638089378,0.277349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| ||
|short_description=p5@OBFC2A | |short_description=p5@OBFC2A | ||
}} | }} |
Latest revision as of 05:03, 19 September 2015
Short description: | p5@OBFC2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_OBFC2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_uc002uta.2_5end |
EntrezGene: | OBFC2A |
HGNC: | 26232 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 1.86e-12 | 8 |
myeloid leukocyte | 1.13e-10 | 72 |
germ line cell | 4.70e-10 | 7 |
germ cell | 4.70e-10 | 7 |
dendritic cell | 6.26e-10 | 10 |
macrophage | 1.94e-08 | 6 |
Langerhans cell | 3.18e-08 | 5 |
myeloid cell | 3.26e-08 | 108 |
common myeloid progenitor | 3.26e-08 | 108 |
neutrophil | 6.57e-08 | 3 |
squamous epithelial cell | 8.92e-08 | 63 |
macrophage dendritic cell progenitor | 1.20e-07 | 61 |
chorionic membrane mesenchymal stem cell | 1.54e-07 | 3 |
granulocyte monocyte progenitor cell | 1.88e-07 | 67 |
granulocyte | 3.26e-07 | 8 |
mesothelial cell | 3.88e-07 | 19 |
monopoietic cell | 5.31e-07 | 59 |
monocyte | 5.31e-07 | 59 |
monoblast | 5.31e-07 | 59 |
promonocyte | 5.31e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.13e-10 | 98 |
blood island | 3.13e-10 | 98 |
hemolymphoid system | 1.32e-08 | 108 |
blood | 6.83e-08 | 15 |
haemolymphatic fluid | 6.83e-08 | 15 |
organism substance | 6.83e-08 | 15 |
egg chorion | 1.54e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.46e-10 | 14 |
carcinoma | 2.41e-08 | 106 |
cell type cancer | 5.69e-08 | 143 |