FFCP PHASE1:Hg19::chrX:118925600..118925620,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6170 | |EntrezGene=6170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10350 | |HGNC=10350 | ||
|TSSclassifier=strong | |||
|UniProt=P62891 | |UniProt=P62891 | ||
|association_with_transcript=0bp_to_ENST00000361575,NM_001000,uc004erx.1_5end | |association_with_transcript=0bp_to_ENST00000361575,NM_001000,uc004erx.1_5end | ||
|cluster_id=chrX:118925600..118925620,- | |||
|coexpression_cluster_id=C4624 | |||
|description=CAGE_peak_2_at_RPL39_5end | |description=CAGE_peak_2_at_RPL39_5end | ||
|id=chrX:118925600..118925620,- | |id=chrX:118925600..118925620,- | ||
|ontology_enrichment_celltype=CL:0000003!7.80e-20!722;CL:0000012!1.98e-19!682;CL:0000548!8.68e-18!679;CL:0000004!8.68e-18!679;CL:0000255!8.68e-18!679;CL:0000838!1.59e-11!52;CL:0000144!2.65e-11!625;CL:0000393!4.84e-11!60;CL:0000211!4.84e-11!60;CL:0000542!5.39e-11!53;CL:0000051!5.39e-11!53;CL:0000187!2.05e-09!54;CL:0000680!2.58e-09!57;CL:0000056!2.58e-09!57;CL:0000355!2.58e-09!57;CL:0000183!8.93e-09!59;CL:0002371!3.02e-08!591;CL:0000945!5.09e-08!24;CL:0000826!5.09e-08!24;CL:0000192!1.21e-07!42;CL:0000514!1.21e-07!42;CL:0000236!3.13e-07!14 | |ontology_enrichment_celltype=CL:0000003!7.80e-20!722;CL:0000012!1.98e-19!682;CL:0000548!8.68e-18!679;CL:0000004!8.68e-18!679;CL:0000255!8.68e-18!679;CL:0000838!1.59e-11!52;CL:0000144!2.65e-11!625;CL:0000393!4.84e-11!60;CL:0000211!4.84e-11!60;CL:0000542!5.39e-11!53;CL:0000051!5.39e-11!53;CL:0000187!2.05e-09!54;CL:0000680!2.58e-09!57;CL:0000056!2.58e-09!57;CL:0000355!2.58e-09!57;CL:0000183!8.93e-09!59;CL:0002371!3.02e-08!591;CL:0000945!5.09e-08!24;CL:0000826!5.09e-08!24;CL:0000192!1.21e-07!42;CL:0000514!1.21e-07!42;CL:0000236!3.13e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.76e-08;24!CL:0000542;1.58e-07;53!CL:0000236;5.90e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.59e-11,52;CL:0000393,2.87e-11,61;CL:0000211,2.87e-11,61;CL:0000542,5.39e-11,53;CL:0000051,5.39e-11,53;CL:0000187,1.23e-09,55;CL:0000680,1.56e-09,58;CL:0000056,1.56e-09,58;CL:0000355,1.56e-09,58;CL:0000945,5.09e-08,24;CL:0000826,5.09e-08,24;CL:0000192,7.31e-08,43;CL:0000514,7.31e-08,43;CL:0000236,3.13e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;1.58e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!5.12e-11!82;UBERON:0004290!5.17e-11!70;UBERON:0000914!9.24e-10!83;UBERON:0002329!9.24e-10!83;UBERON:0003077!9.24e-10!83;UBERON:0003059!9.24e-10!83;UBERON:0007282!9.24e-10!83;UBERON:0009618!9.24e-10!83;UBERON:0007285!9.24e-10!83;UBERON:0001134!1.07e-08!61;UBERON:0002036!1.07e-08!61;UBERON:0003082!1.07e-08!61;UBERON:0002385!1.12e-07!63;UBERON:0001015!1.12e-07!63;UBERON:0000383!1.12e-07!63;UBERON:0000072!9.48e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;2.01e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,3.09e-11,71;UBERON:0003059,3.09e-11,71;UBERON:0007282,3.09e-11,71;UBERON:0004290,3.09e-11,71;UBERON:0009618,3.09e-11,71;UBERON:0000486,3.10e-11,83;UBERON:0007524,4.71e-11,73;UBERON:0003077,9.21e-11,72;UBERON:0007285,9.21e-11,72;UBERON:0007503,8.67e-10,78;UBERON:0001134,6.55e-09,62;UBERON:0002036,6.55e-09,62;UBERON:0003082,6.55e-09,62;UBERON:0002385,6.96e-08,64;UBERON:0001015,6.96e-08,64;UBERON:0000383,6.96e-08,64;UBERON:0000072,5.86e-07,47 | |||
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| ||
|short_description=p2@RPL39 | |short_description=p2@RPL39 | ||
}} | }} |
Latest revision as of 05:22, 19 September 2015
Short description: | p2@RPL39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPL39_5end |
Coexpression cluster: | C4624_CD34_CD4_CD8_CD133_CD19_testicular_diffuse |
Association with transcript: | 0bp_to_ENST00000361575, NM_001000, uc004erx.1_5end |
EntrezGene: | RPL39 |
HGNC: | 10350 |
UniProt: | P62891 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.59e-11 | 52 |
electrically responsive cell | 2.87e-11 | 61 |
electrically active cell | 2.87e-11 | 61 |
lymphocyte | 5.39e-11 | 53 |
common lymphoid progenitor | 5.39e-11 | 53 |
muscle cell | 1.23e-09 | 55 |
muscle precursor cell | 1.56e-09 | 58 |
myoblast | 1.56e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.56e-09 | 58 |
lymphocyte of B lineage | 5.09e-08 | 24 |
pro-B cell | 5.09e-08 | 24 |
smooth muscle cell | 7.31e-08 | 43 |
smooth muscle myoblast | 7.31e-08 | 43 |
B cell | 3.13e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
somite | 3.09e-11 | 71 |
presomitic mesoderm | 3.09e-11 | 71 |
presumptive segmental plate | 3.09e-11 | 71 |
dermomyotome | 3.09e-11 | 71 |
trunk paraxial mesoderm | 3.09e-11 | 71 |
multilaminar epithelium | 3.10e-11 | 83 |
dense mesenchyme tissue | 4.71e-11 | 73 |
paraxial mesoderm | 9.21e-11 | 72 |
presumptive paraxial mesoderm | 9.21e-11 | 72 |
epithelial vesicle | 8.67e-10 | 78 |
skeletal muscle tissue | 6.55e-09 | 62 |
striated muscle tissue | 6.55e-09 | 62 |
myotome | 6.55e-09 | 62 |
muscle tissue | 6.96e-08 | 64 |
musculature | 6.96e-08 | 64 |
musculature of body | 6.96e-08 | 64 |
segment of respiratory tract | 5.86e-07 | 47 |