FFCP PHASE1:Hg19::chr7:6523690..6523701,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11014 | |EntrezGene=11014 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6305 | |HGNC=6305 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000490996_5end | |association_with_transcript=-2bp_to_ENST00000490996_5end | ||
|cluster_id=chr7:6523690..6523701,- | |||
|description=CAGE_peak_2_at_KDELR2_5end | |description=CAGE_peak_2_at_KDELR2_5end | ||
|id=chr7:6523690..6523701,- | |id=chr7:6523690..6523701,- | ||
|ontology_enrichment_celltype=CL:0000055!1.47e-14!180;CL:0000192!4.22e-09!42;CL:0000514!4.22e-09!42;CL:0000183!3.42e-08!59;CL:0000359!4.84e-08!32;CL:0002321!9.89e-08!248;CL:0000220!1.00e-07!246;CL:0000187!1.17e-07!54;CL:0000222!1.17e-07!119;CL:0000680!1.34e-07!57;CL:0000056!1.34e-07!57;CL:0000355!1.34e-07!57;CL:0000393!2.73e-07!60;CL:0000211!2.73e-07!60;CL:0000136!2.78e-07!15 | |ontology_enrichment_celltype=CL:0000055!1.47e-14!180;CL:0000192!4.22e-09!42;CL:0000514!4.22e-09!42;CL:0000183!3.42e-08!59;CL:0000359!4.84e-08!32;CL:0002321!9.89e-08!248;CL:0000220!1.00e-07!246;CL:0000187!1.17e-07!54;CL:0000222!1.17e-07!119;CL:0000680!1.34e-07!57;CL:0000056!1.34e-07!57;CL:0000355!1.34e-07!57;CL:0000393!2.73e-07!60;CL:0000211!2.73e-07!60;CL:0000136!2.78e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.08e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.31e-08,43;CL:0000514,1.31e-08,43;CL:0000359,4.36e-08,32;CL:0000136,1.39e-07,15;CL:0000187,2.93e-07,55;CL:0000680,3.21e-07,58;CL:0000056,3.21e-07,58;CL:0000355,3.21e-07,58;CL:0000393,5.23e-07,61;CL:0000211,5.23e-07,61;CL:0000222,8.79e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!6.78e-13!216;UBERON:0005256!1.14e-09!143;UBERON:0000486!6.09e-09!82;UBERON:0000926!6.61e-09!448;UBERON:0004120!6.61e-09!448;UBERON:0006603!6.61e-09!448;UBERON:0004872!1.31e-08!84;UBERON:0004458!3.70e-08!49;UBERON:0001637!4.70e-08!42;UBERON:0003509!4.70e-08!42;UBERON:0004572!4.70e-08!42;UBERON:0003104!6.28e-08!238;UBERON:0009142!6.28e-08!238;UBERON:0003102!7.42e-08!95;UBERON:0000490!7.91e-08!138;UBERON:0001981!8.22e-08!60;UBERON:0007500!8.22e-08!60;UBERON:0004537!8.22e-08!60;UBERON:0006965!8.22e-08!60;UBERON:0005156!8.77e-08!59;UBERON:0000990!8.77e-08!59;UBERON:0004290!1.04e-07!70;UBERON:0000914!1.28e-07!83;UBERON:0002329!1.28e-07!83;UBERON:0003077!1.28e-07!83;UBERON:0003059!1.28e-07!83;UBERON:0007282!1.28e-07!83;UBERON:0009618!1.28e-07!83;UBERON:0007285!1.28e-07!83;UBERON:0002385!1.74e-07!63;UBERON:0001015!1.74e-07!63;UBERON:0000383!1.74e-07!63;UBERON:0002323!2.23e-07!46;UBERON:0000055!3.21e-07!69;UBERON:0002553!3.23e-07!70;UBERON:0001134!3.45e-07!61;UBERON:0002036!3.45e-07!61;UBERON:0003082!3.45e-07!61;UBERON:0000466!3.72e-07!126;UBERON:0004119!6.27e-07!169;UBERON:0000925!6.27e-07!169;UBERON:0006595!6.27e-07!169;UBERON:0003101!9.57e-07!22;UBERON:0000079!9.57e-07!22 | |ontology_enrichment_uberon=UBERON:0002100!6.78e-13!216;UBERON:0005256!1.14e-09!143;UBERON:0000486!6.09e-09!82;UBERON:0000926!6.61e-09!448;UBERON:0004120!6.61e-09!448;UBERON:0006603!6.61e-09!448;UBERON:0004872!1.31e-08!84;UBERON:0004458!3.70e-08!49;UBERON:0001637!4.70e-08!42;UBERON:0003509!4.70e-08!42;UBERON:0004572!4.70e-08!42;UBERON:0003104!6.28e-08!238;UBERON:0009142!6.28e-08!238;UBERON:0003102!7.42e-08!95;UBERON:0000490!7.91e-08!138;UBERON:0001981!8.22e-08!60;UBERON:0007500!8.22e-08!60;UBERON:0004537!8.22e-08!60;UBERON:0006965!8.22e-08!60;UBERON:0005156!8.77e-08!59;UBERON:0000990!8.77e-08!59;UBERON:0004290!1.04e-07!70;UBERON:0000914!1.28e-07!83;UBERON:0002329!1.28e-07!83;UBERON:0003077!1.28e-07!83;UBERON:0003059!1.28e-07!83;UBERON:0007282!1.28e-07!83;UBERON:0009618!1.28e-07!83;UBERON:0007285!1.28e-07!83;UBERON:0002385!1.74e-07!63;UBERON:0001015!1.74e-07!63;UBERON:0000383!1.74e-07!63;UBERON:0002323!2.23e-07!46;UBERON:0000055!3.21e-07!69;UBERON:0002553!3.23e-07!70;UBERON:0001134!3.45e-07!61;UBERON:0002036!3.45e-07!61;UBERON:0003082!3.45e-07!61;UBERON:0000466!3.72e-07!126;UBERON:0004119!6.27e-07!169;UBERON:0000925!6.27e-07!169;UBERON:0006595!6.27e-07!169;UBERON:0003101!9.57e-07!22;UBERON:0000079!9.57e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0003101;2.40e-07;22!UBERON:0000079;2.40e-07;22!UBERON:0004458;9.06e-07;48 | |||
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| ||
|short_description=p2@KDELR2 | |short_description=p2@KDELR2 | ||
}} | }} |
Latest revision as of 05:36, 19 September 2015
Short description: | p2@KDELR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KDELR2_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000490996_5end |
EntrezGene: | KDELR2 |
HGNC: | 6305 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.31e-08 | 43 |
smooth muscle myoblast | 1.31e-08 | 43 |
vascular associated smooth muscle cell | 4.36e-08 | 32 |
fat cell | 1.39e-07 | 15 |
muscle cell | 2.93e-07 | 55 |
muscle precursor cell | 3.21e-07 | 58 |
myoblast | 3.21e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.21e-07 | 58 |
electrically responsive cell | 5.23e-07 | 61 |
electrically active cell | 5.23e-07 | 61 |
mesodermal cell | 8.79e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.30e-12 | 199 |
trunk mesenchyme | 1.21e-09 | 122 |
anatomical cavity | 8.96e-09 | 61 |
body cavity or lining | 1.67e-08 | 49 |
splanchnic layer of lateral plate mesoderm | 2.43e-08 | 83 |
multilaminar epithelium | 2.76e-08 | 83 |
unilaminar epithelium | 3.84e-08 | 148 |
mesoderm | 5.02e-08 | 315 |
mesoderm-derived structure | 5.02e-08 | 315 |
presumptive mesoderm | 5.02e-08 | 315 |
mesenchyme | 5.25e-08 | 160 |
entire embryonic mesenchyme | 5.25e-08 | 160 |
artery | 8.21e-08 | 42 |
arterial blood vessel | 8.21e-08 | 42 |
arterial system | 8.21e-08 | 42 |
reproductive structure | 8.43e-08 | 59 |
reproductive system | 8.43e-08 | 59 |
body cavity | 1.10e-07 | 46 |
epithelial tube open at both ends | 1.71e-07 | 59 |
blood vessel | 1.71e-07 | 59 |
blood vasculature | 1.71e-07 | 59 |
vascular cord | 1.71e-07 | 59 |
body cavity precursor | 1.91e-07 | 54 |
male organism | 5.10e-07 | 22 |
male reproductive system | 5.10e-07 | 22 |
muscle tissue | 6.37e-07 | 64 |
musculature | 6.37e-07 | 64 |
musculature of body | 6.37e-07 | 64 |
somite | 7.01e-07 | 71 |
presomitic mesoderm | 7.01e-07 | 71 |
presumptive segmental plate | 7.01e-07 | 71 |
dermomyotome | 7.01e-07 | 71 |
trunk paraxial mesoderm | 7.01e-07 | 71 |