FFCP PHASE2:Hg19::chr12:54691711..54691725,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4778 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:7780 |TSSclass...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=7780 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F8W1N9 | ||
|association_with_transcript=-43bp_to_ENST00000553198_5end | |association_with_transcript=-43bp_to_ENST00000553198_5end | ||
|cluster_id=chr12:54691711..54691725,- | |cluster_id=chr12:54691711..54691725,- |
Latest revision as of 05:42, 19 September 2015
Short description: | p7@NFE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NFE2_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -43bp_to_ENST00000553198_5end |
EntrezGene: | NFE2 |
HGNC: | 7780 |
UniProt: | F8W1N9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p7@NFE2 |
---|
0
5
10
15
20
25
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 6.82e-33 | 108 |
common myeloid progenitor | 6.82e-33 | 108 |
hematopoietic stem cell | 4.38e-23 | 168 |
hematopoietic oligopotent progenitor cell | 8.43e-23 | 161 |
hematopoietic multipotent progenitor cell | 8.43e-23 | 161 |
hematopoietic cell | 1.60e-21 | 177 |
neutrophil | 3.45e-14 | 3 |
granulocyte | 8.59e-14 | 8 |
myeloid leukocyte | 3.82e-11 | 72 |
erythroid lineage cell | 3.97e-10 | 2 |
Showing 1 to 10 of 25 entries
Ontology term | p-value | n |
---|---|---|
blood | 1.37e-23 | 15 |
haemolymphatic fluid | 1.37e-23 | 15 |
organism substance | 1.37e-23 | 15 |
hematopoietic system | 1.49e-17 | 98 |
blood island | 1.49e-17 | 98 |
hemolymphoid system | 1.91e-15 | 108 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.31e-24 | 31 |
leukemia | 2.95e-21 | 39 |
hematologic cancer | 1.87e-15 | 51 |
immune system cancer | 1.87e-15 | 51 |
chronic leukemia | 6.66e-13 | 8 |
Showing 1 to 5 of 5 entries