FFCP PHASE1:Hg19::chr18:29598620..29598630,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:29598620..29598630,+ to FFCP PHASE1:Hg19::chr18:29598620..29598630,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54941 | |EntrezGene=54941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21150 | |HGNC=21150 | ||
|TSSclassifier=strong | |||
|UniProt=Q96EQ8 | |UniProt=Q96EQ8 | ||
|association_with_transcript=175bp_to_NM_017831,uc002kxf.1_5end | |||
|cluster_id=chr18:29598620..29598630,+ | |||
|description=CAGE_peak_5_at_RNF125_5end | |||
|id=chr18:29598620..29598630,+ | |||
|ontology_enrichment_celltype=CL:0000084!9.62e-07!25;CL:0000827!9.62e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.65e-15;5!CL:0000097;9.12e-14;5!CL:0000791;2.78e-13;18!CL:0000789;2.78e-13;18!CL:0002419;2.78e-13;18!CL:0000084;7.00e-13;25!CL:0000039;7.02e-10;7!CL:0000586;7.02e-10;7!CL:0000624;1.50e-07;6!CL:0000163;1.85e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.00e-14,5;CL:0000097,2.55e-14,5;CL:0002028,2.55e-14,5;CL:0000791,1.88e-13,18;CL:0000789,1.88e-13,18;CL:0002420,1.88e-13,18;CL:0002419,1.88e-13,18;CL:0000790,1.88e-13,18;CL:0000084,4.30e-13,25;CL:0000827,4.30e-13,25;CL:0000039,1.35e-09,7;CL:0000586,1.35e-09,7;CL:0000838,5.15e-08,52;CL:0000542,8.47e-08,53;CL:0000051,8.47e-08,53;CL:0000163,9.43e-08,9;CL:0000624,1.32e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;2.78e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,2.5692062866918,0.704772020479856,0,0,0,0,0,1.04474251279935,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0.0821005894499457,0,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0.369754010166788,0,0,0.293600439334847,0.553995408531877,0.200544447470142,0,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,1.37696839079683,1.57204305099666,3.08402248499264,0.334372990781356,3.2592226663359,1.4203434172042,1.94826728407911,0.334231370655521,0.294605907474837,0.221533894583621,0.270803863765016,0.896639238079726,0.910415432919148,1.47994114143309,2.21080014228679,1.44901542867526,2.37258501059297,1.07016331235885,0,0.566546713487831,0.766440987203842,1.37450978193052,1.26509846009751,0,2.60433381542567,0,0,0.383959833463255,1.24930726552346,0,0,2.41928091869679,2.94184215361858,1.88271725047639,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0.370784442784429,0.649094787309367,0.870648686496336,0.26591592103773,0.476981248610684,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735326160691737,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0.23486899728753,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0.612975591598039,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.860413786167011,3.90315859614705,3.44577397635862,4.06678800043314,2.17688215532278,2.01856680700503,2.18986415445498,0,0,0,0,0,0.709840800239063,0.337169380156203,0.482022059766964,0.661763836394364,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0,0,0.329250856225877,1.1240175325762,0,0.277765335475589,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0.702012795417713,0.297262324577456,0,0,0,0.626909658919938,0.290633938513962,0,2.46331618947972,4.4024217006613,2.69526550203004,1.72943944100354,1.8936365013957,0.126995788584338,0,0,0,0.205654985406647,1.50171528921959,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0.144781306667579,0,0.179060963239896,2.12961773587702,0.985153801009636,1.72502059887614,1.28343036279748,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0,0.260650843404249,0,0,0.82707210449155,0.647142602455851,2.02782359826544,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0,0.200506470303285,0.368323955743585,0,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0.261435451024901,0,0,0,0.103041011647722,0,0.247528499761764,0,0.650060246036521,0,0,0,0.15350367472613,0,0.107420244868274,0.290033387828457,0.170453254832202,0,0.495854746082934,1.34533047155574,0.255225424989168,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,1.15755106853338,0.655894752046633,0,0,0,0,0,0,0,0.422215270595328,0,0,0.349934720244983,0.48111056362756,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0.648473311192717,0,0,0.320472213382419,0,0.490080431962063,0.185803175125719,0,0.853702120180969,1.4348364545594,0.59873811429845,1.53204296105893,2.54008299268659,0.324621940274555,0.280797178113459,0,0.626719583092093,0,2.70866844482565,0.1605880751037,0.201799707191048,0.425846237690326,1.37402137902306,0,0,0,0.19538809540204,0,2.46174797895425,0.270455678475983,0,0,1.68426486367398,0.586032717087576,0,1.67165076416218,0.568272293612826,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0.539210106883961,0,0,0.0986434056369336,0,0,0,0,0,1.04171104434093,0,0,0,0.254253650292766,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0.871507708151921,0,0.769502585037971,0.113942055847001,0.23056390438806,0.359030577639089,1.19512109114209,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0.317873157960757,0,0,0.141353071433941,1.29833183845255,0.995261931078505,0.442287822516696,0.611030144933625,0.296521128680622,0.617819694732514,0.313265848516366,0.269604531922708,0,0.234264445725339,0,0.586993856796269,2.42780379534093,0,0,0,0.189559738885464,0.60129367765797,0.622129148383483,0,0,0.313932918407225,0,0,0,0.173559738335131,0.0979923974143777,0.174118413160805,0.17472666824203,0,1.45134496933628,1.82723292715464,0.903270027585302,0.193978032976839,0,0.225980740780532,0.137041924646751,0,0,0,0.0801588202515337,0.426905989478705,0.39961921916426,0.144090417154106,0.458146384663663,0,0.864328787928898,0.248505071130865,0.235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| ||
|short_description=p5@RNF125 | |||
}} | }} |
Latest revision as of 05:57, 19 September 2015
Short description: | p5@RNF125 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RNF125_5end |
Coexpression cluster: | NA |
Association with transcript: | 175bp_to_NM_017831, uc002kxf.1_5end |
EntrezGene: | RNF125 |
HGNC: | 21150 |
UniProt: | Q96EQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.00e-14 | 5 |
mast cell | 2.55e-14 | 5 |
basophil mast progenitor cell | 2.55e-14 | 5 |
mature alpha-beta T cell | 1.88e-13 | 18 |
alpha-beta T cell | 1.88e-13 | 18 |
immature T cell | 1.88e-13 | 18 |
mature T cell | 1.88e-13 | 18 |
immature alpha-beta T cell | 1.88e-13 | 18 |
T cell | 4.30e-13 | 25 |
pro-T cell | 4.30e-13 | 25 |
germ line cell | 1.35e-09 | 7 |
germ cell | 1.35e-09 | 7 |
lymphoid lineage restricted progenitor cell | 5.15e-08 | 52 |
lymphocyte | 8.47e-08 | 53 |
common lymphoid progenitor | 8.47e-08 | 53 |
endocrine cell | 9.43e-08 | 9 |
CD4-positive, alpha-beta T cell | 1.32e-07 | 6 |