FFCP PHASE1:Hg19::chr14:23284675..23284684,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:23284675..23284684,-
|short_description=p11@SLC7A7
|description=CAGE_peak_11_at_SLC7A7_5end
|association_with_transcript=0bp_to_ENST00000555959_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9056 | |EntrezGene=9056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11065 | |HGNC=11065 | ||
|TSSclassifier=strong | |||
|UniProt=G3V5A1 | |UniProt=G3V5A1 | ||
|association_with_transcript=0bp_to_ENST00000555959_5end | |||
|cluster_id=chr14:23284675..23284684,- | |||
|coexpression_cluster_id=C2288 | |||
|description=CAGE_peak_11_at_SLC7A7_5end | |||
|id=chr14:23284675..23284684,- | |||
|ontology_enrichment_celltype=CL:0002194!1.54e-51!63;CL:0000576!1.54e-51!63;CL:0000040!1.54e-51!63;CL:0000559!1.54e-51!63;CL:0002009!2.46e-49!65;CL:0002057!2.67e-48!42;CL:0000860!6.77e-46!45;CL:0000766!5.10e-45!76;CL:0000839!2.20e-44!70;CL:0000557!1.77e-43!71;CL:0002087!1.34e-33!119;CL:0000738!1.53e-29!140;CL:0000763!4.13e-27!112;CL:0000049!4.13e-27!112;CL:0002031!1.34e-26!124;CL:0000037!2.80e-21!172;CL:0000566!2.80e-21!172;CL:0002032!2.33e-20!165;CL:0000837!2.33e-20!165;CL:0000988!7.57e-19!182;CL:0002393!2.53e-11!9;CL:0002397!2.53e-11!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.97e-38;33!CL:0002057;4.97e-38;33!CL:0000473;1.91e-33;39!CL:0000234;1.91e-33;39!CL:0000576;1.64e-27;48!CL:0000766;4.83e-19;69!CL:0002393;7.01e-10;6!CL:0002397;7.01e-10;6!CL:0002087;1.15e-09;104!CL:0000763;4.42e-09;100!CL:0000738;1.26e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.74e-51,48;CL:0000234,2.74e-51,48;CL:0000860,3.11e-51,42;CL:0002057,3.11e-51,42;CL:0002194,7.77e-43,59;CL:0000576,7.77e-43,59;CL:0000040,7.77e-43,59;CL:0000559,7.77e-43,59;CL:0002009,3.24e-41,61;CL:0000766,2.78e-39,72;CL:0000839,1.37e-37,66;CL:0000557,6.28e-37,67;CL:0002087,3.56e-27,115;CL:0000738,5.69e-25,136;CL:0002031,5.87e-24,120;CL:0000763,9.46e-24,108;CL:0000049,9.46e-24,108;CL:0000037,1.31e-18,168;CL:0002032,1.97e-18,161;CL:0000837,1.97e-18,161;CL:0000988,3.09e-17,177;CL:0002393,8.29e-10,9;CL:0002397,8.29e-10,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.86e-37;42!CL:0000049;1.16e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.72e-37!102;UBERON:0003061!1.72e-37!102;UBERON:0002371!2.30e-36!80;UBERON:0002193!3.49e-33!112;UBERON:0001474!1.80e-32!86;UBERON:0002405!2.15e-26!115;UBERON:0004765!7.91e-25!101;UBERON:0001434!7.91e-25!101;UBERON:0003081!1.61e-14!216;UBERON:0002204!1.19e-13!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;9.33e-10;17!UBERON:0002108;8.32e-08;4!UBERON:0005409;2.12e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.41e-32,76;UBERON:0001474,6.28e-29,82;UBERON:0002390,6.31e-27,98;UBERON:0003061,6.31e-27,98;UBERON:0002405,1.07e-26,93;UBERON:0004765,9.57e-26,90;UBERON:0002193,9.46e-24,108;UBERON:0001434,1.76e-22,100;UBERON:0002204,6.86e-13,167;UBERON:0003081,3.92e-10,203;UBERON:0000160,1.04e-09,17;UBERON:0005409,3.36e-08,25;UBERON:0002108,9.16e-08,4 | |||
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| ||
|short_description=p11@SLC7A7 | |||
}} | }} |
Latest revision as of 07:22, 19 September 2015
Short description: | p11@SLC7A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SLC7A7_5end |
Coexpression cluster: | C2288_mesothelioma_colon_small_Intestinal_Prostate_CD14_Macrophage |
Association with transcript: | 0bp_to_ENST00000555959_5end |
EntrezGene: | SLC7A7 |
HGNC: | 11065 |
UniProt: | G3V5A1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.74e-51 | 48 |
phagocyte | 2.74e-51 | 48 |
classical monocyte | 3.11e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.11e-51 | 42 |
monopoietic cell | 7.77e-43 | 59 |
monocyte | 7.77e-43 | 59 |
monoblast | 7.77e-43 | 59 |
promonocyte | 7.77e-43 | 59 |
macrophage dendritic cell progenitor | 3.24e-41 | 61 |
myeloid leukocyte | 2.78e-39 | 72 |
myeloid lineage restricted progenitor cell | 1.37e-37 | 66 |
granulocyte monocyte progenitor cell | 6.28e-37 | 67 |
nongranular leukocyte | 3.56e-27 | 115 |
leukocyte | 5.69e-25 | 136 |
hematopoietic lineage restricted progenitor cell | 5.87e-24 | 120 |
myeloid cell | 9.46e-24 | 108 |
common myeloid progenitor | 9.46e-24 | 108 |
hematopoietic stem cell | 1.31e-18 | 168 |
hematopoietic oligopotent progenitor cell | 1.97e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.97e-18 | 161 |
hematopoietic cell | 3.09e-17 | 177 |
intermediate monocyte | 8.29e-10 | 9 |
CD14-positive, CD16-positive monocyte | 8.29e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.41e-32 | 76 |
bone element | 6.28e-29 | 82 |
hematopoietic system | 6.31e-27 | 98 |
blood island | 6.31e-27 | 98 |
immune system | 1.07e-26 | 93 |
skeletal element | 9.57e-26 | 90 |
hemolymphoid system | 9.46e-24 | 108 |
skeletal system | 1.76e-22 | 100 |
musculoskeletal system | 6.86e-13 | 167 |
lateral plate mesoderm | 3.92e-10 | 203 |
intestine | 1.04e-09 | 17 |
gastrointestinal system | 3.36e-08 | 25 |
small intestine | 9.16e-08 | 4 |