FFCP PHASE1:Hg19::chr4:89300158..89300238,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:89300158..89300238,+
|short_description=p1@HERC6
|description=CAGE_peak_1_at_HERC6_5end
|association_with_transcript=0bp_to_ENST00000502870_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55008 | |EntrezGene=55008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26072 | |HGNC=26072 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000502870_5end | |||
|cluster_id=chr4:89300158..89300238,+ | |||
|description=CAGE_peak_1_at_HERC6_5end | |||
|id=chr4:89300158..89300238,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.20e-07;18!CL:0000789;9.20e-07;18!CL:0002419;9.20e-07;18 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=CL:0000790;9.20e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.07e-20!115;UBERON:0002780!2.51e-12!41;UBERON:0001890!2.51e-12!41;UBERON:0006240!2.51e-12!41;UBERON:0003080!2.34e-11!42;UBERON:0002020!4.01e-10!34;UBERON:0003528!4.01e-10!34;UBERON:0001869!4.11e-10!32;UBERON:0001893!4.37e-10!34;UBERON:0002619!1.22e-09!22;UBERON:0002791!1.41e-09!33;UBERON:0001049!3.20e-09!57;UBERON:0005068!3.20e-09!57;UBERON:0006241!3.20e-09!57;UBERON:0007135!3.20e-09!57;UBERON:0001950!8.86e-09!20;UBERON:0000956!1.98e-08!25;UBERON:0000203!1.98e-08!25;UBERON:0002616!2.81e-08!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.89e-10;22!UBERON:0001869;1.82e-09;32!UBERON:0002780;3.05e-09;41!UBERON:0001890;3.05e-09;41!UBERON:0001893;3.42e-09;34!UBERON:0001950;3.88e-09;20!UBERON:0003528;4.64e-09;34!UBERON:0002020;4.64e-09;34!UBERON:0002791;9.48e-09;32!UBERON:0000956;1.12e-08;25!UBERON:0000203;1.12e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.78e-20,114;UBERON:0002780,2.47e-12,41;UBERON:0001890,2.47e-12,41;UBERON:0003080,2.47e-12,41;UBERON:0006240,2.47e-12,41;UBERON:0003528,4.24e-10,34;UBERON:0002020,4.24e-10,34;UBERON:0001869,4.39e-10,32;UBERON:0001893,4.62e-10,34;UBERON:0001049,8.22e-10,56;UBERON:0005068,8.22e-10,56;UBERON:0006241,8.22e-10,56;UBERON:0007135,8.22e-10,56;UBERON:0002619,9.13e-10,22;UBERON:0000073,1.86e-09,53;UBERON:0002616,1.86e-09,53;UBERON:0002791,2.06e-09,32;UBERON:0001950,6.81e-09,20;UBERON:0000956,2.25e-08,25;UBERON:0000203,2.25e-08,25;UBERON:0003056,9.77e-08,61;UBERON:0010371,8.77e-07,104 | |||
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| ||
|short_description=p1@HERC6 | |||
}} | }} |
Latest revision as of 07:33, 19 September 2015
Short description: | p1@HERC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HERC6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000502870_5end |
EntrezGene: | HERC6 |
HGNC: | 26072 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.78e-20 | 114 |
regional part of forebrain | 2.47e-12 | 41 |
forebrain | 2.47e-12 | 41 |
anterior neural tube | 2.47e-12 | 41 |
future forebrain | 2.47e-12 | 41 |
brain grey matter | 4.24e-10 | 34 |
gray matter | 4.24e-10 | 34 |
cerebral hemisphere | 4.39e-10 | 32 |
telencephalon | 4.62e-10 | 34 |
neural tube | 8.22e-10 | 56 |
neural rod | 8.22e-10 | 56 |
future spinal cord | 8.22e-10 | 56 |
neural keel | 8.22e-10 | 56 |
regional part of cerebral cortex | 9.13e-10 | 22 |
regional part of nervous system | 1.86e-09 | 53 |
regional part of brain | 1.86e-09 | 53 |
regional part of telencephalon | 2.06e-09 | 32 |
neocortex | 6.81e-09 | 20 |
cerebral cortex | 2.25e-08 | 25 |
pallium | 2.25e-08 | 25 |
pre-chordal neural plate | 9.77e-08 | 61 |
ecto-epithelium | 8.77e-07 | 104 |