FFCP PHASE1:Hg19::chr6:56716896..56716928,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=100652766,667 | |EntrezGene=100652766,667 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=1090 | |HGNC=1090 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=E7ETB9 | |UniProt=E7ETB9 | ||
|association_with_transcript=-147bp_to_ENST00000520645_5end | |association_with_transcript=-147bp_to_ENST00000520645_5end | ||
|cluster_id=chr6:56716896..56716928,- | |||
|coexpression_cluster_id=C310 | |coexpression_cluster_id=C310 | ||
|description=CAGE_peak_8_at_DST_5end | |description=CAGE_peak_8_at_DST_5end | ||
Latest revision as of 10:04, 19 September 2015
| Short description: | p8@DST |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_DST_5end |
| Coexpression cluster: | C310_caudate_medulla_spinal_thalamus_locus_globus_hippocampus |
| Association with transcript: | -147bp_to_ENST00000520645_5end |
| EntrezGene: | 100652766,667 |
| HGNC: | 1090 |
| UniProt: | E7ETB9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p8@DST |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 9.78e-136 | 56 |
| neural rod | 9.78e-136 | 56 |
| future spinal cord | 9.78e-136 | 56 |
| neural keel | 9.78e-136 | 56 |
| regional part of nervous system | 1.15e-125 | 53 |
| regional part of brain | 1.15e-125 | 53 |
| central nervous system | 7.23e-118 | 81 |
| nervous system | 6.14e-113 | 89 |
| brain | 1.62e-107 | 68 |
| future brain | 1.62e-107 | 68 |
Showing 1 to 10 of 99 entries
