FFCP PHASE1:Hg19::chr18:3450293..3450304,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:3450293..3450304,+
|short_description=p4@TGIF1
|description=CAGE_peak_4_at_TGIF1_5end
|association_with_transcript=118bp_to_ENST00000551402_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7050 | |EntrezGene=7050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11776 | |HGNC=11776 | ||
|TSSclassifier=strong | |||
|UniProt=F8W1J9 | |UniProt=F8W1J9 | ||
|association_with_transcript=118bp_to_ENST00000551402_5end | |||
|cluster_id=chr18:3450293..3450304,+ | |||
|description=CAGE_peak_4_at_TGIF1_5end | |||
|id=chr18:3450293..3450304,+ | |||
|ontology_enrichment_celltype=CL:0002321!8.68e-20!248;CL:0000220!2.18e-19!246;CL:0000055!2.57e-15!180;CL:0000548!1.52e-12!679;CL:0000004!1.52e-12!679;CL:0000255!1.52e-12!679;CL:0000222!2.96e-12!119;CL:0000012!6.47e-12!682;CL:0000066!2.86e-11!254;CL:0000144!8.10e-08!625;CL:0000076!2.23e-07!62;CL:0000393!4.36e-07!60;CL:0000211!4.36e-07!60;CL:0000213!7.13e-07!57;CL:0000215!7.13e-07!57;CL:0002371!9.61e-07!591 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.56e-18,250;CL:0000222,2.71e-11,121;CL:0000066,2.11e-09,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!6.26e-18!659;UBERON:0000467!2.01e-13!625;UBERON:0000922!2.21e-13!612;UBERON:0000480!4.06e-13!626;UBERON:0000923!3.37e-12!604;UBERON:0005291!3.37e-12!604;UBERON:0006598!3.37e-12!604;UBERON:0002532!3.37e-12!604;UBERON:0004872!3.88e-12!84;UBERON:0002050!4.13e-12!605;UBERON:0005423!4.13e-12!605;UBERON:0000926!1.34e-11!448;UBERON:0004120!1.34e-11!448;UBERON:0006603!1.34e-11!448;UBERON:0003914!1.37e-11!118;UBERON:0002100!1.41e-10!216;UBERON:0000055!1.93e-10!69;UBERON:0001981!3.34e-10!60;UBERON:0007500!3.34e-10!60;UBERON:0004537!3.34e-10!60;UBERON:0006965!3.34e-10!60;UBERON:0002049!6.03e-10!79;UBERON:0007798!6.03e-10!79;UBERON:0000490!2.42e-09!138;UBERON:0003104!3.44e-09!238;UBERON:0009142!3.44e-09!238;UBERON:0001637!6.89e-09!42;UBERON:0003509!6.89e-09!42;UBERON:0004572!6.89e-09!42;UBERON:0004573!2.51e-08!33;UBERON:0004571!2.51e-08!33;UBERON:0000483!6.62e-08!309;UBERON:0001048!9.99e-08!168;UBERON:0005256!1.27e-07!143;UBERON:0000119!1.50e-07!312;UBERON:0004111!1.88e-07!241;UBERON:0000486!3.31e-07!82;UBERON:0000477!3.60e-07!286;UBERON:0000947!6.14e-07!21;UBERON:0010191!6.14e-07!21;UBERON:0000475!7.49e-07!365;UBERON:0000481!8.81e-07!347;UBERON:0004535!9.08e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;9.39e-08;33!UBERON:0004571;9.39e-08;33!UBERON:0007500;4.71e-07;56!UBERON:0001981;4.71e-07;56!UBERON:0004537;4.71e-07;56!UBERON:0000947;7.34e-07;21!UBERON:0010191;7.34e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,6.06e-12,83;UBERON:0003914,1.30e-11,117;UBERON:0002100,1.55e-10,199;UBERON:0000055,3.04e-10,68;UBERON:0007500,5.33e-10,59;UBERON:0001981,5.33e-10,59;UBERON:0004537,5.33e-10,59;UBERON:0006965,5.33e-10,59;UBERON:0002049,1.63e-09,78;UBERON:0007798,1.63e-09,78;UBERON:0000922,6.59e-09,592;UBERON:0000490,7.31e-09,148;UBERON:0001637,8.18e-09,42;UBERON:0003509,8.18e-09,42;UBERON:0004572,8.18e-09,42;UBERON:0004573,1.54e-08,33;UBERON:0004571,1.54e-08,33;UBERON:0005423,1.34e-07,581;UBERON:0004535,3.98e-07,109;UBERON:0001048,4.39e-07,160;UBERON:0000486,4.89e-07,83;UBERON:0000947,7.27e-07,21;UBERON:0010191,7.27e-07,21;UBERON:0000923,8.98e-07,560;UBERON:0010316,8.98e-07,560;UBERON:0005291,8.98e-07,560;UBERON:0006598,8.98e-07,560;UBERON:0010317,8.98e-07,560;UBERON:0002532,8.98e-07,560;UBERON:0002050,8.99e-07,564 | |||
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| ||
|short_description=p4@TGIF1 | |||
}} | }} |
Latest revision as of 10:19, 19 September 2015
Short description: | p4@TGIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TGIF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 118bp_to_ENST00000551402_5end |
EntrezGene: | TGIF1 |
HGNC: | 11776 |
UniProt: | F8W1J9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.56e-18 | 250 |
mesodermal cell | 2.71e-11 | 121 |
epithelial cell | 2.11e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 6.06e-12 | 83 |
epithelial tube | 1.30e-11 | 117 |
trunk | 1.55e-10 | 199 |
vessel | 3.04e-10 | 68 |
epithelial tube open at both ends | 5.33e-10 | 59 |
blood vessel | 5.33e-10 | 59 |
blood vasculature | 5.33e-10 | 59 |
vascular cord | 5.33e-10 | 59 |
vasculature | 1.63e-09 | 78 |
vascular system | 1.63e-09 | 78 |
embryo | 6.59e-09 | 592 |
unilaminar epithelium | 7.31e-09 | 148 |
artery | 8.18e-09 | 42 |
arterial blood vessel | 8.18e-09 | 42 |
arterial system | 8.18e-09 | 42 |
systemic artery | 1.54e-08 | 33 |
systemic arterial system | 1.54e-08 | 33 |
developing anatomical structure | 1.34e-07 | 581 |
cardiovascular system | 3.98e-07 | 109 |
primordium | 4.39e-07 | 160 |
multilaminar epithelium | 4.89e-07 | 83 |
aorta | 7.27e-07 | 21 |
aortic system | 7.27e-07 | 21 |
germ layer | 8.98e-07 | 560 |
germ layer / neural crest | 8.98e-07 | 560 |
embryonic tissue | 8.98e-07 | 560 |
presumptive structure | 8.98e-07 | 560 |
germ layer / neural crest derived structure | 8.98e-07 | 560 |
epiblast (generic) | 8.98e-07 | 560 |
embryonic structure | 8.99e-07 | 564 |