FFCP PHASE1:Hg19::chr12:56624556..56624567,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283375 | |EntrezGene=283375 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20502 | |HGNC=20502 | ||
|TSSclassifier=strong | |||
|UniProt=C9JVC6 | |UniProt=C9JVC6 | ||
|association_with_transcript=10bp_to_ENST00000437277_5end | |association_with_transcript=10bp_to_ENST00000437277_5end | ||
|cluster_id=chr12:56624556..56624567,+ | |||
|coexpression_cluster_id=C27 | |coexpression_cluster_id=C27 | ||
|description=CAGE_peak_3_at_SLC39A5_5end | |description=CAGE_peak_3_at_SLC39A5_5end | ||
|id=chr12:56624556..56624567,+ | |id=chr12:56624556..56624567,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.80e-20!12;CL:0000417!1.80e-20!12;CL:0000668!1.80e-20!12;CL:0000414!1.80e-20!12;CL:0000412!1.80e-20!12;CL:0000182!1.80e-20!12;CL:0002322!2.06e-09!5;CL:0000223!1.41e-08!59 | |ontology_enrichment_celltype=CL:0000181!1.80e-20!12;CL:0000417!1.80e-20!12;CL:0000668!1.80e-20!12;CL:0000414!1.80e-20!12;CL:0000412!1.80e-20!12;CL:0000182!1.80e-20!12;CL:0002322!2.06e-09!5;CL:0000223!1.41e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002563;2.37e-11;4!CL:0000182;2.47e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.13e-11,4;CL:0000182,2.41e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0000358;6.97e-12;1!UBERON:0001045;1.32e-11;1!UBERON:0004161;5.67e-09;11!UBERON:0009497;1.14e-07;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000160;1.14e-36;17!UBERON:0005409;1.58e-28;22!UBERON:0002108;4.88e-20;4!UBERON:0001155;6.40e-19;9!UBERON:0004921;2.76e-17;33!UBERON:0000059;1.56e-15;11!UBERON:0001154;1.32e-11;1!UBERON:0001301;1.32e-11;1!UBERON:0001153;1.32e-11;1!UBERON:0009854;1.32e-11;1!UBERON:0001242;2.37e-11;4!UBERON:0001262;2.37e-11;4!UBERON:0004786;2.37e-11;4!UBERON:0004808;2.37e-11;4!UBERON:0001277;2.37e-11;4!UBERON:0001007;3.89e-10;81!UBERON:0004907;3.74e-09;5!UBERON:0002107;6.25e-09;19!UBERON:0006925;6.25e-09;19!UBERON:0001555;2.69e-07;54!UBERON:0000485;7.41e-07;7!UBERON:0003929;7.41e-07;7!UBERON:0002423;7.93e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.70e-37,17;UBERON:0005409,3.42e-25,25;UBERON:0002108,5.05e-20,4;UBERON:0001155,5.84e-19,9;UBERON:0000059,1.45e-15,11;UBERON:0004921,5.12e-13,118;UBERON:0001154,1.07e-11,1;UBERON:0001153,1.07e-11,1;UBERON:0001045,1.07e-11,1;UBERON:0001301,1.63e-11,1;UBERON:0001242,2.13e-11,4;UBERON:0001262,2.13e-11,4;UBERON:0004786,2.13e-11,4;UBERON:0004808,2.13e-11,4;UBERON:0001277,2.13e-11,4;UBERON:0009854,3.49e-11,23;UBERON:0001007,3.02e-10,145;UBERON:0001555,3.02e-10,145;UBERON:0007026,3.02e-10,145;UBERON:0009856,6.99e-10,26;UBERON:0004907,3.44e-09,5;UBERON:0004119,4.17e-09,160;UBERON:0000925,4.17e-09,160;UBERON:0006595,4.17e-09,160;UBERON:0002107,5.75e-09,19;UBERON:0006925,5.75e-09,19;UBERON:0008836,5.75e-09,19;UBERON:0003929,8.92e-09,54;UBERON:0008835,9.08e-08,22;UBERON:0003894,9.08e-08,22;UBERON:0011216,5.44e-07,223;UBERON:0007499,7.44e-07,25;UBERON:0009497,7.44e-07,25;UBERON:0000015,7.44e-07,25;UBERON:0002423,7.44e-07,25;UBERON:0006235,7.44e-07,25;UBERON:0004161,7.44e-07,25 | |||
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|short_description=p3@SLC39A5 | |short_description=p3@SLC39A5 | ||
}} | }} |
Latest revision as of 10:30, 19 September 2015
Short description: | p3@SLC39A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC39A5_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | 10bp_to_ENST00000437277_5end |
EntrezGene: | SLC39A5 |
HGNC: | 20502 |
UniProt: | C9JVC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.13e-11 | 4 |
hepatocyte | 2.41e-08 | 12 |