FFCP PHASE1:Hg19::chr12:56732630..56732644,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51561 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15488 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NPF7 | |||
|association_with_transcript=-18bp_to_ENST00000228534,NM_016584,uc001sla.2_5end | |||
|cluster_id=chr12:56732630..56732644,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_IL23A_5end | |||
|id=chr12:56732630..56732644,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.55e-29!140;CL:0002087!4.99e-27!119;CL:0002031!1.73e-26!124;CL:0002057!1.80e-24!42;CL:0000860!3.92e-22!45;CL:0002032!1.31e-21!165;CL:0000837!1.31e-21!165;CL:0000037!6.80e-21!172;CL:0000566!6.80e-21!172;CL:0000988!1.35e-18!182;CL:0002009!2.12e-15!65;CL:0000838!7.98e-14!52;CL:0002194!1.38e-13!63;CL:0000576!1.38e-13!63;CL:0000040!1.38e-13!63;CL:0000559!1.38e-13!63;CL:0000542!2.12e-13!53;CL:0000051!2.12e-13!53;CL:0000766!2.83e-13!76;CL:0000557!3.06e-13!71;CL:0000839!2.64e-11!70;CL:0000763!1.47e-09!112;CL:0000049!1.47e-09!112;CL:0000084!1.25e-07!25;CL:0000827!1.25e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.04e-27;33!CL:0002057;5.04e-27;33!CL:0000473;1.09e-18;39!CL:0000234;1.09e-18;39!CL:0000576;7.86e-16;48!CL:0002087;1.52e-12;104!CL:0000766;1.08e-10;69!CL:0001014;1.60e-10;2!CL:0001016;1.60e-10;2!CL:0002393;3.37e-07;6!CL:0002397;3.37e-07;6!CL:0000624;4.66e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.67e-32,42;CL:0002057,7.67e-32,42;CL:0000473,2.57e-27,48;CL:0000234,2.57e-27,48;CL:0002009,1.96e-25,61;CL:0000738,3.62e-23,136;CL:0002031,3.86e-23,120;CL:0000557,9.22e-23,67;CL:0002087,2.23e-22,115;CL:0002194,5.48e-21,59;CL:0000576,5.48e-21,59;CL:0000040,5.48e-21,59;CL:0000559,5.48e-21,59;CL:0000766,1.66e-18,72;CL:0000839,2.40e-18,66;CL:0000037,1.77e-17,168;CL:0002032,5.03e-17,161;CL:0000837,5.03e-17,161;CL:0000988,3.00e-16,177;CL:0000763,7.38e-14,108;CL:0000049,7.38e-14,108;CL:0001014,1.60e-10,2;CL:0001016,1.60e-10,2;CL:0000624,6.29e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;4.24e-22;42!UBERON:0009117;3.17e-07;10!UBERON:0005564;3.17e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;1.14e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,8.72e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.18e-10!80;UBERON:0002390!3.10e-10!102;UBERON:0003061!3.10e-10!102;UBERON:0001474!4.45e-10!86;UBERON:0002193!5.08e-09!112;UBERON:0004765!1.92e-08!101;UBERON:0001434!1.92e-08!101;UBERON:0002405!8.44e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.54e-19,76;UBERON:0001474,8.85e-18,82;UBERON:0002390,8.01e-16,98;UBERON:0003061,8.01e-16,98;UBERON:0004765,8.47e-16,90;UBERON:0002405,3.83e-15,93;UBERON:0002193,6.46e-14,108;UBERON:0001434,9.09e-14,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.458480434487708,0.57470412614962,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,1.66198622559563,1.20326668482085,2.82114131930607,0,0,0,0.145398238779565,0,1.21292030593908,0.232429036905685,0.822335776043652,0.929119112685311,0.575384784644301,1.2808035326455,1.6553756092201,6.20542225325913,14.2006630388442,13.5426486594342,0.188242339542605,0.272906150057846,0.224723484445085,8.26426509401437,5.1348644332175,16.6227652707751,0,0.199463657621632,0,7.2552309657146,22.6954089876456,55.4311801606062,0.502497330513487,0.521482918420201,0.868755378820466,9.08099253950053,17.6773265274031,35.7602497808199,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0.400395987036012,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,1.37696839079683,1.17903228824749,1.02800749499755,0.167186495390678,0.32592226663359,0,0,0.445641827540694,0,0,0.270803863765016,0.25618263945135,0.260118695119756,0,0,0,0.296573126324121,0,0,0.339928028092699,0.766440987203842,0,0.253019692019503,0,0.651083453856419,0.950452044448374,0,0,0,0,0,1.41124720257313,0.267440195783507,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0.487894824518382,0,0,0.621966330092223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.567100388969546,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,1.50939302401662,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.881644060693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,1.80479845162965,0.539107359730903,0,0,0.105551628892876,0,0,0,0,0,0,0.764628819135115,0.831076008928724,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0.19924798825107,0,0,0,0.738508832766417,0,0.898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.89898258075224,1.14262965711403,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,1.65355761355942,0.103688191397247,0,0,0,0,0.853828638089378,0,0,0,0.0870592065804026,0,0,0,0,0,0,0.706049013532002,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0.275078873194468,0.415440338029185,10.348799011369,3.0952078182318,0,0,0,0.104909176269996,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,1.7785046870815,0,0.638341257770182,0,0,0,0,5.4968933687582,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0.211312123358627,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21023041222112,0,0,0,2.06998520703863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,1.11855431797792,0.294450700845729,0.121917924982269,0,0,0,0,0.467878926924211,0,0,2.823652050974,0,0.301925687133347,0,0,1.88126918544609,0,0,0,0,0,0,0,0.0644578879735772,0.499705779624645,0,1.05868461514708,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85568723277549,0.534434810531121,1.01084389488329,1.0028301571695,0,0,0,0,0.426467963801962,0,0.129177819672012,0.124149428591716,0,0,0,0.217716747896961,0,0.336760265072938,0.0717222053926763,0,0.569822880276821,0.426909383510862,0,0,0,0,0,0,0,1.60284246151616 | |||
|short_description=p4@IL23A | |||
}} |
Latest revision as of 10:50, 19 September 2015
Short description: | p4@IL23A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IL23A_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -18bp_to_ENST00000228534, NM_016584, uc001sla.2_5end |
EntrezGene: | IL23A |
HGNC: | 15488 |
UniProt: | Q9NPF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.67e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.67e-32 | 42 |
defensive cell | 2.57e-27 | 48 |
phagocyte | 2.57e-27 | 48 |
macrophage dendritic cell progenitor | 1.96e-25 | 61 |
leukocyte | 3.62e-23 | 136 |
hematopoietic lineage restricted progenitor cell | 3.86e-23 | 120 |
granulocyte monocyte progenitor cell | 9.22e-23 | 67 |
nongranular leukocyte | 2.23e-22 | 115 |
monopoietic cell | 5.48e-21 | 59 |
monocyte | 5.48e-21 | 59 |
monoblast | 5.48e-21 | 59 |
promonocyte | 5.48e-21 | 59 |
myeloid leukocyte | 1.66e-18 | 72 |
myeloid lineage restricted progenitor cell | 2.40e-18 | 66 |
hematopoietic stem cell | 1.77e-17 | 168 |
hematopoietic oligopotent progenitor cell | 5.03e-17 | 161 |
hematopoietic multipotent progenitor cell | 5.03e-17 | 161 |
hematopoietic cell | 3.00e-16 | 177 |
myeloid cell | 7.38e-14 | 108 |
common myeloid progenitor | 7.38e-14 | 108 |
CD1a-positive Langerhans cell | 1.60e-10 | 2 |
immature CD1a-positive Langerhans cell | 1.60e-10 | 2 |
CD4-positive, alpha-beta T cell | 6.29e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.54e-19 | 76 |
bone element | 8.85e-18 | 82 |
hematopoietic system | 8.01e-16 | 98 |
blood island | 8.01e-16 | 98 |
skeletal element | 8.47e-16 | 90 |
immune system | 3.83e-15 | 93 |
hemolymphoid system | 6.46e-14 | 108 |
skeletal system | 9.09e-14 | 100 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 8.72e-10 | 2 |