FFCP PHASE1:Hg19::chr3:69171739..69171754,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56203 | |EntrezGene=56203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6649 | |HGNC=6649 | ||
|TSSclassifier=strong | |||
|UniProt=Q0VAK6 | |UniProt=Q0VAK6 | ||
|association_with_transcript=0bp_to_ENST00000489031,NM_198271,uc003dns.2,uc003dnt.2_5end | |association_with_transcript=0bp_to_ENST00000489031,NM_198271,uc003dns.2,uc003dnt.2_5end | ||
|cluster_id=chr3:69171739..69171754,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_1_at_LMOD3_5end | |description=CAGE_peak_1_at_LMOD3_5end | ||
|id=chr3:69171739..69171754,- | |id=chr3:69171739..69171754,- | ||
|ontology_enrichment_celltype=CL:0000188!7.12e-13!9 | |ontology_enrichment_celltype=CL:0000188!7.12e-13!9 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.55e-11;4!UBERON:0007284;4.55e-11;4!UBERON:0006603;6.08e-09;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;3.60e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.52e-10,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001134;3.26e-17;16!UBERON:0002036;3.26e-17;16!UBERON:0003978;1.34e-14;3!UBERON:0000946;1.34e-14;3!UBERON:0004151;1.37e-14;3!UBERON:0007100;1.14e-13;25!UBERON:0005090;9.55e-11;2!UBERON:0001630;9.55e-11;2!UBERON:0000341;1.53e-10;2!UBERON:0003296;2.19e-10;4!UBERON:0010133;2.19e-10;4!UBERON:0001829;3.21e-10;2!UBERON:0002081;4.42e-10;2!UBERON:0002385;4.51e-10;31!UBERON:0001015;4.51e-10;31!UBERON:0000383;4.51e-10;31!UBERON:0002133;4.96e-10;2!UBERON:0001905;7.45e-10;2!UBERON:0002757;7.45e-10;2!UBERON:0010134;7.45e-10;2!UBERON:0005408;7.45e-10;2!UBERON:0001899;7.45e-10;2!UBERON:0003127;1.04e-09;2!UBERON:0007023;8.02e-08;114!UBERON:0001723;2.33e-07;3!UBERON:0001033;2.33e-07;3!UBERON:0001044;2.36e-07;6!UBERON:0003293;2.36e-07;6!UBERON:0003294;2.36e-07;6!UBERON:0010047;2.36e-07;6!UBERON:0003408;2.36e-07;6!UBERON:0000167;2.36e-07;6!UBERON:0000948;3.67e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.31e-26,114;UBERON:0003978,1.19e-14,3;UBERON:0009751,1.19e-14,3;UBERON:0000946,1.19e-14,3;UBERON:0002523,1.19e-14,3;UBERON:0005983,1.19e-14,3;UBERON:0002165,1.19e-14,3;UBERON:0002062,1.19e-14,3;UBERON:0007280,1.19e-14,3;UBERON:0004151,1.25e-14,3;UBERON:0007100,1.50e-12,27;UBERON:0003103,6.92e-12,68;UBERON:0005090,9.55e-11,2;UBERON:0001630,9.55e-11,2;UBERON:0000341,1.53e-10,2;UBERON:0003296,2.38e-10,4;UBERON:0010133,2.38e-10,4;UBERON:0001829,3.21e-10,2;UBERON:0002081,4.04e-10,2;UBERON:0010227,4.04e-10,2;UBERON:0002133,4.42e-10,2;UBERON:0001905,7.97e-10,2;UBERON:0002757,7.97e-10,2;UBERON:0010134,7.97e-10,2;UBERON:0005408,7.97e-10,2;UBERON:0001899,7.97e-10,2;UBERON:0003127,8.33e-10,2;UBERON:0001723,2.33e-07,3;UBERON:0001033,2.33e-07,3;UBERON:0010056,2.33e-07,3;UBERON:0001044,2.33e-07,6;UBERON:0003293,2.33e-07,6;UBERON:0003294,2.33e-07,6;UBERON:0010047,2.33e-07,6;UBERON:0000167,2.33e-07,6;UBERON:0000166,6.81e-07,22 | |||
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| ||
|short_description=p1@LMOD3 | |short_description=p1@LMOD3 | ||
}} | }} |
Latest revision as of 11:33, 19 September 2015
Short description: | p1@LMOD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LMOD3_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000489031, NM_198271, uc003dns.2, uc003dnt.2_5end |
EntrezGene: | LMOD3 |
HGNC: | 6649 |
UniProt: | Q0VAK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.31e-26 | 114 |
valve | 1.19e-14 | 3 |
cardiac mesenchyme | 1.19e-14 | 3 |
cardial valve | 1.19e-14 | 3 |
tunica intima | 1.19e-14 | 3 |
heart layer | 1.19e-14 | 3 |
endocardium | 1.19e-14 | 3 |
endocardial cushion | 1.19e-14 | 3 |
presumptive endocardium | 1.19e-14 | 3 |
cardiac chamber | 1.25e-14 | 3 |
primary circulatory organ | 1.50e-12 | 27 |
compound organ | 6.92e-12 | 68 |
muscle structure | 9.55e-11 | 2 |
muscle organ | 9.55e-11 | 2 |
throat | 1.53e-10 | 2 |
gland of diencephalon | 2.38e-10 | 4 |
neuroendocrine gland | 2.38e-10 | 4 |
major salivary gland | 3.21e-10 | 2 |
cardiac atrium | 4.04e-10 | 2 |
future cardiac atrium | 4.04e-10 | 2 |
atrioventricular valve | 4.42e-10 | 2 |
pineal body | 7.97e-10 | 2 |
regional part of epithalamus | 7.97e-10 | 2 |
secretory circumventricular organ | 7.97e-10 | 2 |
circumventricular organ | 7.97e-10 | 2 |
epithalamus | 7.97e-10 | 2 |
open tracheal system trachea | 8.33e-10 | 2 |
tongue | 2.33e-07 | 3 |
gustatory system | 2.33e-07 | 3 |
future tongue | 2.33e-07 | 3 |
saliva-secreting gland | 2.33e-07 | 6 |
gland of oral region | 2.33e-07 | 6 |
gland of foregut | 2.33e-07 | 6 |
oral gland | 2.33e-07 | 6 |
oral cavity | 2.33e-07 | 6 |
oral opening | 6.81e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.52e-10 | 2 |