FFCP PHASE1:Hg19::chrX:131623044..131623089,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:131623044..131623089,-
|short_description=p1@MBNL3
|description=CAGE_peak_1_at_MBNL3_5end
|association_with_transcript=0bp_to_uc010nrl.1_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55796 | |EntrezGene=55796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20564 | |HGNC=20564 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010nrl.1_5end | |||
|cluster_id=chrX:131623044..131623089,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_MBNL3_5end | |||
|id=chrX:131623044..131623089,- | |||
|ontology_enrichment_celltype=CL:0000037!3.10e-31!172;CL:0000566!3.10e-31!172;CL:0002031!3.29e-30!124;CL:0000738!4.92e-30!140;CL:0002032!6.12e-30!165;CL:0000837!6.12e-30!165;CL:0002087!4.96e-28!119;CL:0000988!3.35e-27!182;CL:0000839!2.42e-19!70;CL:0000557!6.32e-19!71;CL:0000766!9.08e-19!76;CL:0000763!1.38e-18!112;CL:0000049!1.38e-18!112;CL:0002009!7.74e-17!65;CL:0002194!2.45e-16!63;CL:0000576!2.45e-16!63;CL:0000040!2.45e-16!63;CL:0000559!2.45e-16!63;CL:0000860!1.42e-12!45;CL:0002057!5.07e-11!42;CL:0000945!9.73e-11!24;CL:0000826!9.73e-11!24;CL:0000542!1.15e-10!53;CL:0000051!1.15e-10!53;CL:0000838!2.11e-10!52;CL:0000236!1.16e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.33e-11;24!CL:0000576;4.79e-09;48!CL:0000766;8.55e-09;69!CL:0000473;2.16e-08;39!CL:0000234;2.16e-08;39!CL:0000236;3.59e-08;13!CL:0002087;6.95e-08;104!CL:0000860;1.26e-07;33!CL:0002057;1.26e-07;33!CL:0000542;5.45e-07;53!CL:0000738;6.53e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.18e-31,168;CL:0002032,4.49e-30,161;CL:0000837,4.49e-30,161;CL:0002031,6.08e-30,120;CL:0000738,1.10e-29,136;CL:0002087,1.00e-27,115;CL:0000988,1.20e-27,177;CL:0000839,4.28e-19,66;CL:0000557,1.16e-18,67;CL:0000763,1.18e-18,108;CL:0000049,1.18e-18,108;CL:0000766,1.28e-18,72;CL:0002009,1.58e-16,61;CL:0002194,5.09e-16,59;CL:0000576,5.09e-16,59;CL:0000040,5.09e-16,59;CL:0000559,5.09e-16,59;CL:0000473,1.32e-13,48;CL:0000234,1.32e-13,48;CL:0000860,2.95e-11,42;CL:0002057,2.95e-11,42;CL:0000945,5.74e-11,24;CL:0000826,5.74e-11,24;CL:0000542,9.33e-11,53;CL:0000051,9.33e-11,53;CL:0000838,1.73e-10,52;CL:0000236,8.12e-08,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-08;42!CL:0000051;5.45e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.17e-23!102;UBERON:0003061!3.17e-23!102;UBERON:0002193!9.27e-20!112;UBERON:0002371!8.05e-16!80;UBERON:0007023!2.14e-14!115;UBERON:0001474!9.98e-14!86;UBERON:0004765!1.17e-11!101;UBERON:0001434!1.17e-11!101;UBERON:0002405!5.80e-11!115;UBERON:0000178!6.28e-08!15;UBERON:0000179!6.28e-08!15;UBERON:0000463!6.28e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.29e-08;15!UBERON:0000179;4.29e-08;15!UBERON:0000463;4.29e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.69e-23,98;UBERON:0003061,4.69e-23,98;UBERON:0002193,1.92e-19,108;UBERON:0002371,1.67e-15,76;UBERON:0007023,1.05e-14,114;UBERON:0002405,1.49e-13,93;UBERON:0001474,2.44e-13,82;UBERON:0004765,8.61e-12,90;UBERON:0001434,1.20e-10,100;UBERON:0000178,4.35e-08,15;UBERON:0000179,4.35e-08,15;UBERON:0000463,4.35e-08,15 | |||
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| ||
|short_description=p1@MBNL3 | |||
}} | }} |
Latest revision as of 11:36, 19 September 2015
Short description: | p1@MBNL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MBNL3_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_uc010nrl.1_5end |
EntrezGene: | MBNL3 |
HGNC: | 20564 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.18e-31 | 168 |
hematopoietic oligopotent progenitor cell | 4.49e-30 | 161 |
hematopoietic multipotent progenitor cell | 4.49e-30 | 161 |
hematopoietic lineage restricted progenitor cell | 6.08e-30 | 120 |
leukocyte | 1.10e-29 | 136 |
nongranular leukocyte | 1.00e-27 | 115 |
hematopoietic cell | 1.20e-27 | 177 |
myeloid lineage restricted progenitor cell | 4.28e-19 | 66 |
granulocyte monocyte progenitor cell | 1.16e-18 | 67 |
myeloid cell | 1.18e-18 | 108 |
common myeloid progenitor | 1.18e-18 | 108 |
myeloid leukocyte | 1.28e-18 | 72 |
macrophage dendritic cell progenitor | 1.58e-16 | 61 |
monopoietic cell | 5.09e-16 | 59 |
monocyte | 5.09e-16 | 59 |
monoblast | 5.09e-16 | 59 |
promonocyte | 5.09e-16 | 59 |
defensive cell | 1.32e-13 | 48 |
phagocyte | 1.32e-13 | 48 |
classical monocyte | 2.95e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.95e-11 | 42 |
lymphocyte of B lineage | 5.74e-11 | 24 |
pro-B cell | 5.74e-11 | 24 |
lymphocyte | 9.33e-11 | 53 |
common lymphoid progenitor | 9.33e-11 | 53 |
lymphoid lineage restricted progenitor cell | 1.73e-10 | 52 |
B cell | 8.12e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.69e-23 | 98 |
blood island | 4.69e-23 | 98 |
hemolymphoid system | 1.92e-19 | 108 |
bone marrow | 1.67e-15 | 76 |
adult organism | 1.05e-14 | 114 |
immune system | 1.49e-13 | 93 |
bone element | 2.44e-13 | 82 |
skeletal element | 8.61e-12 | 90 |
skeletal system | 1.20e-10 | 100 |
blood | 4.35e-08 | 15 |
haemolymphatic fluid | 4.35e-08 | 15 |
organism substance | 4.35e-08 | 15 |