FFCP PHASE1:Hg19::chr2:201980961..201980975,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8837 | |EntrezGene=8837 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1876 | |HGNC=1876 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000342795_5end | |association_with_transcript=0bp_to_ENST00000342795_5end | ||
|cluster_id=chr2:201980961..201980975,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_13_at_CFLAR_5end | |description=CAGE_peak_13_at_CFLAR_5end | ||
|id=chr2:201980961..201980975,+ | |id=chr2:201980961..201980975,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.68e-25!42;CL:0000766!2.78e-24!76;CL:0000860!3.04e-22!45;CL:0000557!1.42e-20!71;CL:0000738!1.63e-20!140;CL:0002009!3.86e-20!65;CL:0002194!1.61e-19!63;CL:0000576!1.61e-19!63;CL:0000040!1.61e-19!63;CL:0000559!1.61e-19!63;CL:0000839!1.17e-18!70;CL:0002087!9.17e-17!119;CL:0002031!5.26e-16!124;CL:0000037!5.73e-11!172;CL:0000566!5.73e-11!172;CL:0002032!1.03e-10!165;CL:0000837!1.03e-10!165;CL:0000763!1.08e-10!112;CL:0000049!1.08e-10!112;CL:0000988!4.13e-10!182 | |ontology_enrichment_celltype=CL:0002057!3.68e-25!42;CL:0000766!2.78e-24!76;CL:0000860!3.04e-22!45;CL:0000557!1.42e-20!71;CL:0000738!1.63e-20!140;CL:0002009!3.86e-20!65;CL:0002194!1.61e-19!63;CL:0000576!1.61e-19!63;CL:0000040!1.61e-19!63;CL:0000559!1.61e-19!63;CL:0000839!1.17e-18!70;CL:0002087!9.17e-17!119;CL:0002031!5.26e-16!124;CL:0000037!5.73e-11!172;CL:0000566!5.73e-11!172;CL:0002032!1.03e-10!165;CL:0000837!1.03e-10!165;CL:0000763!1.08e-10!112;CL:0000049!1.08e-10!112;CL:0000988!4.13e-10!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.36e-30;33!CL:0002057;3.36e-30;33!CL:0000473;1.95e-26;39!CL:0000234;1.95e-26;39!CL:0000576;2.56e-23;48!CL:0000766;1.76e-17;69!CL:0000094;4.18e-09;8!CL:0002087;2.25e-08;104!CL:0000763;2.72e-07;100!CL:0000738;9.77e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.57e-38,48;CL:0000234,1.57e-38,48;CL:0000860,1.14e-37,42;CL:0002057,1.14e-37,42;CL:0000766,9.37e-37,72;CL:0002009,6.09e-32,61;CL:0002194,5.81e-31,59;CL:0000576,5.81e-31,59;CL:0000040,5.81e-31,59;CL:0000559,5.81e-31,59;CL:0000557,7.71e-31,67;CL:0000839,5.99e-28,66;CL:0000738,2.10e-26,136;CL:0002087,1.43e-22,115;CL:0002031,5.07e-21,120;CL:0000763,1.93e-19,108;CL:0000049,1.93e-19,108;CL:0000037,8.59e-17,168;CL:0002032,1.92e-16,161;CL:0000837,1.92e-16,161;CL:0000988,1.21e-14,177;CL:0000094,3.95e-09,8;CL:0000134,5.06e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.44e-27;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.26e-27!112;UBERON:0002390!4.29e-24!102;UBERON:0003061!4.29e-24!102;UBERON:0003081!3.80e-19!216;UBERON:0002371!9.86e-19!80;UBERON:0002405!3.77e-16!115;UBERON:0001474!7.18e-16!86;UBERON:0004765!2.16e-12!101;UBERON:0001434!2.16e-12!101;UBERON:0002204!5.90e-08!167;UBERON:0001009!7.40e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.26e-07;15!UBERON:0000179;3.26e-07;15!UBERON:0000463;3.26e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.07e-38,108;UBERON:0002390,5.29e-34,98;UBERON:0003061,5.29e-34,98;UBERON:0002405,4.11e-31,93;UBERON:0002371,2.93e-28,76;UBERON:0001474,1.20e-24,82;UBERON:0003081,3.92e-24,203;UBERON:0004765,9.64e-23,90;UBERON:0001434,3.83e-19,100;UBERON:0000926,2.54e-12,315;UBERON:0004120,2.54e-12,315;UBERON:0006603,2.54e-12,315;UBERON:0002204,3.63e-12,167;UBERON:0000178,1.68e-07,15;UBERON:0000179,1.68e-07,15;UBERON:0000463,1.68e-07,15 | |||
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| ||
|short_description=p13@CFLAR | |short_description=p13@CFLAR | ||
}} | }} |
Latest revision as of 11:51, 19 September 2015
Short description: | p13@CFLAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CFLAR_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000342795_5end |
EntrezGene: | CFLAR |
HGNC: | 1876 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.57e-38 | 48 |
phagocyte | 1.57e-38 | 48 |
classical monocyte | 1.14e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-37 | 42 |
myeloid leukocyte | 9.37e-37 | 72 |
macrophage dendritic cell progenitor | 6.09e-32 | 61 |
monopoietic cell | 5.81e-31 | 59 |
monocyte | 5.81e-31 | 59 |
monoblast | 5.81e-31 | 59 |
promonocyte | 5.81e-31 | 59 |
granulocyte monocyte progenitor cell | 7.71e-31 | 67 |
myeloid lineage restricted progenitor cell | 5.99e-28 | 66 |
leukocyte | 2.10e-26 | 136 |
nongranular leukocyte | 1.43e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 5.07e-21 | 120 |
myeloid cell | 1.93e-19 | 108 |
common myeloid progenitor | 1.93e-19 | 108 |
hematopoietic stem cell | 8.59e-17 | 168 |
hematopoietic oligopotent progenitor cell | 1.92e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.92e-16 | 161 |
hematopoietic cell | 1.21e-14 | 177 |
granulocyte | 3.95e-09 | 8 |
mesenchymal cell | 5.06e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.07e-38 | 108 |
hematopoietic system | 5.29e-34 | 98 |
blood island | 5.29e-34 | 98 |
immune system | 4.11e-31 | 93 |
bone marrow | 2.93e-28 | 76 |
bone element | 1.20e-24 | 82 |
lateral plate mesoderm | 3.92e-24 | 203 |
skeletal element | 9.64e-23 | 90 |
skeletal system | 3.83e-19 | 100 |
mesoderm | 2.54e-12 | 315 |
mesoderm-derived structure | 2.54e-12 | 315 |
presumptive mesoderm | 2.54e-12 | 315 |
musculoskeletal system | 3.63e-12 | 167 |
blood | 1.68e-07 | 15 |
haemolymphatic fluid | 1.68e-07 | 15 |
organism substance | 1.68e-07 | 15 |