FFCP PHASE1:Hg19::chrX:132231123..132231140,-: Difference between revisions
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|id=chrX:132231123..132231140,-
|short_description=p1@USP26
|description=CAGE_peak_1_at_USP26_5end
|association_with_transcript=0bp_to_ENST00000417459,ENST000005111...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83844 | |EntrezGene=83844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13485 | |HGNC=13485 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000417459,ENST00000511190,uc010nrm.1_5end | |||
|cluster_id=chrX:132231123..132231140,- | |||
|coexpression_cluster_id=C598 | |||
|description=CAGE_peak_1_at_USP26_5end | |||
|id=chrX:132231123..132231140,- | |||
|ontology_enrichment_celltype=CL:0002322!4.20e-12!5;CL:0000054!1.29e-08!2;CL:0000137!1.29e-08!2;CL:0000092!1.29e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000054;5.04e-34;2!CL:0000137;5.04e-34;2!CL:0000092;5.04e-34;2!CL:0002092;6.13e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,5.04e-34,2;CL:0000137,5.04e-34,2;CL:0000092,5.04e-34,2;CL:0002092,6.13e-08,10;CL:0000062,2.47e-07,11;CL:0000375,2.47e-07,11;CL:0000335,2.47e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.56e-08;10!UBERON:0007687;6.56e-08;10!CL:0000335;2.47e-07;11 | |||
|ontology_enrichment_disease=DOID:0060085!6.44e-16!1;DOID:3165!6.44e-16!1;DOID:0060121!6.44e-16!1;DOID:2438!6.44e-16!1;DOID:4418!6.44e-16!1;DOID:200!1.29e-08!2;DOID:4305!1.29e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:0060085;2.39e-66;1!DOID:3165;2.39e-66;1!DOID:0060121;2.39e-66;1!DOID:2438;2.39e-66;1!DOID:4418;2.39e-66;1!DOID:200;5.04e-34;2!DOID:4305;5.04e-34;2!DOID:0060072;8.69e-18;4!DOID:201;2.45e-12;6!DOID:0060100;2.45e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,2.39e-66,1;DOID:3165,2.39e-66,1;DOID:0060121,2.39e-66,1;DOID:2438,2.39e-66,1;DOID:4418,2.39e-66,1;DOID:200,5.04e-34,2;DOID:4305,5.04e-34,2;DOID:0060072,8.69e-18,4;DOID:201,2.45e-12,6;DOID:0060100,2.45e-12,6;DOID:7,7.07e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.65e-16!8;UBERON:0003135!3.51e-12!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000014;8.69e-18;4!UBERON:0002371;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,8.69e-18,4 | |||
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|short_description=p1@USP26 | |||
}} | }} |
Latest revision as of 11:58, 19 September 2015
Short description: | p1@USP26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_USP26_5end |
Coexpression cluster: | C598_fibrosarcoma_osteoclastoma_fibrous_astrocytoma_large_liposarcoma_embryonic |
Association with transcript: | 0bp_to_ENST00000417459, ENST00000511190, uc010nrm.1_5end |
EntrezGene: | USP26 |
HGNC: | 13485 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 5.04e-34 | 2 |
osteocyte | 5.04e-34 | 2 |
osteoclast | 5.04e-34 | 2 |
bone marrow cell | 6.13e-08 | 10 |
osteoblast | 2.47e-07 | 11 |
osteoprogenitor cell | 2.47e-07 | 11 |
mesenchyme condensation cell | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 8.69e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 2.39e-66 | 1 |
skin benign neoplasm | 2.39e-66 | 1 |
integumentary system benign neoplasm | 2.39e-66 | 1 |
dermis tumor | 2.39e-66 | 1 |
cutaneous fibrous histiocytoma | 2.39e-66 | 1 |
giant cell tumor | 5.04e-34 | 2 |
bone giant cell tumor | 5.04e-34 | 2 |
benign neoplasm | 8.69e-18 | 4 |
connective tissue cancer | 2.45e-12 | 6 |
musculoskeletal system cancer | 2.45e-12 | 6 |
disease of anatomical entity | 7.07e-08 | 39 |