FFCP PHASE1:Hg19::chrX:1331578..1331595,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64109 | |EntrezGene=64109 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14281 | |HGNC=14281 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000467626_5end | |||
|cluster_id=chrX:1331578..1331595,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_2_at_CRLF2_5end | |||
|id=chrX:1331578..1331595,- | |||
|ontology_enrichment_celltype=CL:0000839!5.93e-40!70;CL:0000557!2.58e-39!71;CL:0000766!2.28e-36!76;CL:0000860!7.09e-34!45;CL:0002031!7.15e-30!124;CL:0002057!2.56e-29!42;CL:0002194!7.51e-28!63;CL:0000576!7.51e-28!63;CL:0000040!7.51e-28!63;CL:0000559!7.51e-28!63;CL:0002009!7.40e-27!65;CL:0000738!1.06e-25!140;CL:0002274!1.60e-25!5;CL:0000457!1.60e-25!5;CL:0002191!1.60e-25!5;CL:0000097!1.60e-25!5;CL:0000831!1.60e-25!5;CL:0002028!1.60e-25!5;CL:0000763!6.18e-25!112;CL:0000049!6.18e-25!112;CL:0002032!1.77e-22!165;CL:0000837!1.77e-22!165;CL:0000037!2.77e-21!172;CL:0000566!2.77e-21!172;CL:0002087!1.54e-20!119;CL:0000988!9.78e-20!182;CL:0000163!4.69e-14!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.32e-56;5!CL:0000860;9.80e-35;33!CL:0002057;9.80e-35;33!CL:0000163;1.66e-31;9!CL:0000473;2.74e-27;39!CL:0000234;2.74e-27;39!CL:0000766;4.22e-23;69!CL:0000576;1.93e-15;48!CL:0000763;1.52e-11;100!CL:0000151;2.69e-07;36!CL:0002087;5.54e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.32e-56,5;CL:0002028,1.32e-56,5;CL:0000839,3.27e-40,66;CL:0000557,1.36e-39,67;CL:0000766,9.50e-37,72;CL:0000163,1.66e-31,9;CL:0000860,4.58e-30,42;CL:0002057,4.58e-30,42;CL:0000763,3.37e-27,108;CL:0000049,3.37e-27,108;CL:0000473,3.90e-26,48;CL:0000234,3.90e-26,48;CL:0002031,2.25e-21,120;CL:0002194,1.26e-20,59;CL:0000576,1.26e-20,59;CL:0000040,1.26e-20,59;CL:0000559,1.26e-20,59;CL:0002009,6.51e-20,61;CL:0000738,1.24e-18,136;CL:0002032,1.31e-17,161;CL:0000837,1.31e-17,161;CL:0000037,8.67e-17,168;CL:0000988,7.91e-16,177;CL:0002087,6.05e-10,115;CL:0000151,8.00e-08,36;CL:0000134,9.17e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.41e-21;42!CL:0000049;5.06e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.84e-34!80;UBERON:0001474!1.72e-31!86;UBERON:0002390!2.93e-30!102;UBERON:0003061!2.93e-30!102;UBERON:0002193!5.15e-27!112;UBERON:0002405!3.77e-26!115;UBERON:0004765!5.71e-26!101;UBERON:0001434!5.71e-26!101;UBERON:0002204!2.04e-13!167;UBERON:0003081!4.98e-11!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.72e-35,76;UBERON:0001474,4.37e-32,82;UBERON:0002405,6.71e-32,93;UBERON:0002390,3.47e-30,98;UBERON:0003061,3.47e-30,98;UBERON:0004765,4.32e-29,90;UBERON:0002193,3.14e-27,108;UBERON:0001434,5.19e-26,100;UBERON:0002204,8.43e-15,167;UBERON:0003081,1.52e-13,203;UBERON:0000926,6.50e-08,315;UBERON:0004120,6.50e-08,315;UBERON:0006603,6.50e-08,315 | |||
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|short_description=p2@CRLF2 | |||
}} | }} |
Latest revision as of 12:25, 19 September 2015
Short description: | p2@CRLF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CRLF2_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 20bp_to_ENST00000467626_5end |
EntrezGene: | CRLF2 |
HGNC: | 14281 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.32e-56 | 5 |
basophil mast progenitor cell | 1.32e-56 | 5 |
myeloid lineage restricted progenitor cell | 3.27e-40 | 66 |
granulocyte monocyte progenitor cell | 1.36e-39 | 67 |
myeloid leukocyte | 9.50e-37 | 72 |
endocrine cell | 1.66e-31 | 9 |
classical monocyte | 4.58e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.58e-30 | 42 |
myeloid cell | 3.37e-27 | 108 |
common myeloid progenitor | 3.37e-27 | 108 |
defensive cell | 3.90e-26 | 48 |
phagocyte | 3.90e-26 | 48 |
hematopoietic lineage restricted progenitor cell | 2.25e-21 | 120 |
monopoietic cell | 1.26e-20 | 59 |
monocyte | 1.26e-20 | 59 |
monoblast | 1.26e-20 | 59 |
promonocyte | 1.26e-20 | 59 |
macrophage dendritic cell progenitor | 6.51e-20 | 61 |
leukocyte | 1.24e-18 | 136 |
hematopoietic oligopotent progenitor cell | 1.31e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-17 | 161 |
hematopoietic stem cell | 8.67e-17 | 168 |
hematopoietic cell | 7.91e-16 | 177 |
nongranular leukocyte | 6.05e-10 | 115 |
secretory cell | 8.00e-08 | 36 |
mesenchymal cell | 9.17e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.72e-35 | 76 |
bone element | 4.37e-32 | 82 |
immune system | 6.71e-32 | 93 |
hematopoietic system | 3.47e-30 | 98 |
blood island | 3.47e-30 | 98 |
skeletal element | 4.32e-29 | 90 |
hemolymphoid system | 3.14e-27 | 108 |
skeletal system | 5.19e-26 | 100 |
musculoskeletal system | 8.43e-15 | 167 |
lateral plate mesoderm | 1.52e-13 | 203 |
mesoderm | 6.50e-08 | 315 |
mesoderm-derived structure | 6.50e-08 | 315 |
presumptive mesoderm | 6.50e-08 | 315 |