FFCP PHASE1:Hg19::chr22:26875412..26875432,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:26875412..26875432,-
|short_description=p9@HPS4
|description=CAGE_peak_9_at_HPS4_5end
|association_with_transcript=0bp_to_ENST00000429411_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89781 | |EntrezGene=89781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15844 | |HGNC=15844 | ||
|TSSclassifier=strong | |||
|UniProt=F8VYA9 | |UniProt=F8VYA9 | ||
|association_with_transcript=0bp_to_ENST00000429411_5end | |||
|cluster_id=chr22:26875412..26875432,- | |||
|coexpression_cluster_id=C96 | |||
|description=CAGE_peak_9_at_HPS4_5end | |||
|id=chr22:26875412..26875432,- | |||
|ontology_enrichment_celltype=CL:0000037!1.08e-08!172;CL:0000566!1.08e-08!172;CL:0000988!8.25e-08!182;CL:0002032!9.48e-08!165;CL:0000837!9.48e-08!165;CL:0000242!9.55e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000817;5.42e-15;1!CL:0000785;7.13e-15;1!CL:0000819;7.13e-15;1!CL:0000037;1.41e-14;1!CL:0001024;1.41e-14;1!CL:0002032;2.41e-14;1!CL:0000557;2.41e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,4.62e-19,3;CL:0000819,7.13e-15,1;CL:0001024,1.61e-14,1;CL:0000785,4.38e-08,2;CL:0000955,4.38e-08,2;CL:0000818,4.38e-08,2;CL:0000954,4.38e-08,2;CL:0000816,4.38e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.70e-41;3!CL:0000954;4.38e-08;2 | |||
|ontology_enrichment_disease=DOID:1240!6.88e-25!39;DOID:2531!2.65e-24!51;DOID:0060083!2.65e-24!51;DOID:8692!7.21e-20!31;DOID:0050686!4.07e-09!137;DOID:1036!7.73e-09!8;DOID:162!2.09e-08!235;DOID:14566!4.81e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:0060073;7.13e-15;1!DOID:8675;7.13e-15;1!DOID:1240;1.31e-12;39!DOID:2531;5.74e-12;51!DOID:0060083;5.74e-12;51!DOID:1036;1.94e-07;8!DOID:8692;2.99e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,5.40e-16,39;DOID:2531,8.36e-16,51;DOID:0060083,8.36e-16,51;DOID:0060073,7.13e-15,1;DOID:8675,7.13e-15,1;DOID:1036,1.94e-07,8;DOID:8692,5.14e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;8.91e-21;6!UBERON:0002680;4.53e-14;9!UBERON:0001895;4.53e-14;9!UBERON:0004733;1.06e-10;12!UBERON:0002028;1.06e-10;12!UBERON:0004732;6.40e-10;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.91e-21,6;UBERON:0006215,8.91e-21,6;UBERON:0002680,4.53e-14,9;UBERON:0001895,4.53e-14,9;UBERON:0010092,4.53e-14,9;UBERON:0004733,1.06e-10,12;UBERON:0002028,1.06e-10,12;UBERON:0007277,1.06e-10,12;UBERON:0004732,6.40e-10,13;UBERON:0003076,1.14e-08,15;UBERON:0003057,1.14e-08,15 | |||
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| ||
|short_description=p9@HPS4 | |||
}} | }} |
Latest revision as of 12:40, 19 September 2015
Short description: | p9@HPS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HPS4_5end |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000429411_5end |
EntrezGene: | HPS4 |
HGNC: | 15844 |
UniProt: | F8VYA9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 4.62e-19 | 3 |
B-1 B cell | 7.13e-15 | 1 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.61e-14 | 1 |
mature B cell | 4.38e-08 | 2 |
pre-B-II cell | 4.38e-08 | 2 |
transitional stage B cell | 4.38e-08 | 2 |
small pre-B-II cell | 4.38e-08 | 2 |
immature B cell | 4.38e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.91e-21 | 6 |
rhombic lip | 8.91e-21 | 6 |
regional part of metencephalon | 4.53e-14 | 9 |
metencephalon | 4.53e-14 | 9 |
future metencephalon | 4.53e-14 | 9 |
segmental subdivision of hindbrain | 1.06e-10 | 12 |
hindbrain | 1.06e-10 | 12 |
presumptive hindbrain | 1.06e-10 | 12 |
segmental subdivision of nervous system | 6.40e-10 | 13 |
posterior neural tube | 1.14e-08 | 15 |
chordal neural plate | 1.14e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
leukemia | 5.40e-16 | 39 |
hematologic cancer | 8.36e-16 | 51 |
immune system cancer | 8.36e-16 | 51 |
lymphatic system cancer | 7.13e-15 | 1 |
lymphosarcoma | 7.13e-15 | 1 |
chronic leukemia | 1.94e-07 | 8 |
myeloid leukemia | 5.14e-07 | 31 |