FFCP PHASE1:Hg19::chr8:95229499..95229513,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1015 | |EntrezGene=1015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1756 | |HGNC=1756 | ||
|TSSclassifier=strong | |||
|UniProt=Q12864,B2R778 | |UniProt=Q12864,B2R778 | ||
|association_with_transcript=17bp_to_ENST00000450165,NM_001144663,uc011lgp.1_5end | |association_with_transcript=17bp_to_ENST00000450165,NM_001144663,uc011lgp.1_5end | ||
|cluster_id=chr8:95229499..95229513,- | |||
|coexpression_cluster_id=C121 | |||
|description=CAGE_peak_2_at_CDH17_5end | |description=CAGE_peak_2_at_CDH17_5end | ||
|id=chr8:95229499..95229513,- | |id=chr8:95229499..95229513,- | ||
|ontology_enrichment_celltype=CL:0002127!4.28e-08!1;CL:0000914!4.28e-08!1;CL:0000911!4.28e-08!1;CL:0000814!4.28e-08!1;CL:0002042!4.28e-08!1;CL:0002039!4.28e-08!1;CL:0002040!4.28e-08!1;CL:0002041!4.28e-08!1;CL:0000946!2.63e-07!1;CL:0000786!2.63e-07!1;CL:0000980!2.63e-07!1 | |ontology_enrichment_celltype=CL:0002127!4.28e-08!1;CL:0000914!4.28e-08!1;CL:0000911!4.28e-08!1;CL:0000814!4.28e-08!1;CL:0002042!4.28e-08!1;CL:0002039!4.28e-08!1;CL:0002040!4.28e-08!1;CL:0002041!4.28e-08!1;CL:0000946!2.63e-07!1;CL:0000786!2.63e-07!1;CL:0000980!2.63e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002127;6.62e-41;1!CL:0000911;6.62e-41;1!CL:0000814;6.62e-41;1!CL:0000084;2.20e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,6.62e-41,1;CL:0000914,6.62e-41,1;CL:0000911,6.62e-41,1;CL:0000814,6.62e-41,1;CL:0002042,6.62e-41,1;CL:0002039,6.62e-41,1;CL:0002040,6.62e-41,1;CL:0002041,6.62e-41,1;CL:0000893,3.11e-21,2;CL:0002489,3.11e-21,2;CL:0000809,3.11e-21,2;CL:0000808,3.11e-21,2;CL:0000894,3.11e-21,2;CL:0000806,3.11e-21,2;CL:0000807,3.11e-21,2;CL:0000805,3.11e-21,2;CL:0002425,3.11e-21,2;CL:0000084,2.20e-07,25;CL:0000827,2.20e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002425;3.11e-21;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.21e-12!115;UBERON:0004177!6.03e-09!7;UBERON:0002079!5.96e-08!1;UBERON:0002372!7.26e-08!1;UBERON:0001961!7.26e-08!1;UBERON:0001744!7.26e-08!1;UBERON:0001735!7.26e-08!1;UBERON:0001154!1.39e-07!1;UBERON:0001153!1.39e-07!1;UBERON:0001301!1.91e-07!1;UBERON:0002370!1.92e-07!4;UBERON:0005058!1.92e-07!4;UBERON:0009113!1.92e-07!4;UBERON:0003295!1.92e-07!4;UBERON:0005562!1.92e-07!4;UBERON:0002363!2.47e-07!1;UBERON:0007647!2.47e-07!1;UBERON:0010115!2.47e-07!1;UBERON:0004921!8.64e-07!129;UBERON:0004185!8.64e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.74e-32;4!UBERON:0000160;8.86e-10;17!UBERON:0005409;7.23e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.74e-32,4;UBERON:0002370,2.53e-11,4;UBERON:0005058,2.53e-11,4;UBERON:0009113,2.53e-11,4;UBERON:0003295,2.53e-11,4;UBERON:0005562,2.53e-11,4;UBERON:0000160,8.86e-10,17;UBERON:0003351,5.54e-08,6;UBERON:0005409,4.55e-07,25;UBERON:0004177,5.08e-07,7;UBERON:0005057,5.08e-07,7 | |||
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|short_description=p2@CDH17 | |short_description=p2@CDH17 | ||
}} | }} |
Latest revision as of 12:47, 19 September 2015
Short description: | p2@CDH17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDH17_5end |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | 17bp_to_ENST00000450165, NM_001144663, uc011lgp.1_5end |
EntrezGene: | CDH17 |
HGNC: | 1756 |
UniProt: | Q12864B2R778 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 6.62e-41 | 1 |
immature NK T cell | 6.62e-41 | 1 |
effector T cell | 6.62e-41 | 1 |
mature NK T cell | 6.62e-41 | 1 |
immature NK T cell stage IV | 6.62e-41 | 1 |
immature NK T cell stage I | 6.62e-41 | 1 |
immature NK T cell stage II | 6.62e-41 | 1 |
immature NK T cell stage III | 6.62e-41 | 1 |
thymocyte | 3.11e-21 | 2 |
double negative thymocyte | 3.11e-21 | 2 |
double-positive, alpha-beta thymocyte | 3.11e-21 | 2 |
DN4 thymocyte | 3.11e-21 | 2 |
DN1 thymic pro-T cell | 3.11e-21 | 2 |
DN2 thymocyte | 3.11e-21 | 2 |
DN3 thymocyte | 3.11e-21 | 2 |
immature single positive thymocyte | 3.11e-21 | 2 |
early T lineage precursor | 3.11e-21 | 2 |
T cell | 2.20e-07 | 25 |
pro-T cell | 2.20e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
small intestine | 2.74e-32 | 4 |
thymus | 2.53e-11 | 4 |
hemolymphoid system gland | 2.53e-11 | 4 |
thymic region | 2.53e-11 | 4 |
pharyngeal gland | 2.53e-11 | 4 |
thymus primordium | 2.53e-11 | 4 |
intestine | 8.86e-10 | 17 |
pharyngeal epithelium | 5.54e-08 | 6 |
gastrointestinal system | 4.55e-07 | 25 |
hemopoietic organ | 5.08e-07 | 7 |
immune organ | 5.08e-07 | 7 |