FFCP PHASE1:Hg19::chr6:10420285..10420304,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7020 | |EntrezGene=7020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11742 | |HGNC=11742 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-393bp_to_ENST00000473652_5end | |association_with_transcript=-393bp_to_ENST00000473652_5end | ||
|cluster_id=chr6:10420285..10420304,- | |||
|description=CAGE_peak_18_at_TFAP2A_5end | |description=CAGE_peak_18_at_TFAP2A_5end | ||
|id=chr6:10420285..10420304,- | |id=chr6:10420285..10420304,- | ||
|ontology_enrichment_celltype=CL:0000066!4.55e-28!254;CL:0002159!1.44e-18!13;CL:0002077!2.62e-16!33;CL:0000622!2.01e-12!5;CL:0002076!1.78e-11!43;CL:0000154!2.95e-10!6;CL:0002251!5.69e-10!21;CL:0000362!7.00e-10!8;CL:0002327!1.30e-09!4;CL:0000150!4.66e-09!9;CL:0000240!9.17e-09!6;CL:0000311!9.17e-09!6;CL:0000079!9.17e-09!6;CL:0000237!9.17e-09!6;CL:0000036!9.17e-09!6;CL:0000357!9.17e-09!6;CL:0000114!9.17e-09!6;CL:0000223!3.66e-08!59;CL:0002150!4.94e-08!3;CL:0000861!4.94e-08!3;CL:0002623!5.54e-08!3;CL:0002621!2.36e-07!3;CL:0000312!3.14e-07!5;CL:0002166!7.29e-07!3 | |ontology_enrichment_celltype=CL:0000066!4.55e-28!254;CL:0002159!1.44e-18!13;CL:0002077!2.62e-16!33;CL:0000622!2.01e-12!5;CL:0002076!1.78e-11!43;CL:0000154!2.95e-10!6;CL:0002251!5.69e-10!21;CL:0000362!7.00e-10!8;CL:0002327!1.30e-09!4;CL:0000150!4.66e-09!9;CL:0000240!9.17e-09!6;CL:0000311!9.17e-09!6;CL:0000079!9.17e-09!6;CL:0000237!9.17e-09!6;CL:0000036!9.17e-09!6;CL:0000357!9.17e-09!6;CL:0000114!9.17e-09!6;CL:0000223!3.66e-08!59;CL:0002150!4.94e-08!3;CL:0000861!4.94e-08!3;CL:0002623!5.54e-08!3;CL:0002621!2.36e-07!3;CL:0000312!3.14e-07!5;CL:0002166!7.29e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000622;1.34e-28;5!CL:0000154;8.25e-24;6!CL:0002623;1.21e-17;3!CL:0000150;8.19e-16;9!CL:0002327;9.37e-13;4!CL:0000317;9.65e-13;2!CL:1000448;9.65e-13;2!CL:0002308;9.65e-13;2!CL:0002140;9.65e-13;2!CL:0000362;2.42e-10;9!CL:0002159;6.63e-10;14!CL:0002621;3.76e-08;3!CL:0002251;9.32e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,2.07e-28,5;CL:0000154,1.18e-23,6;CL:0002623,2.02e-17,3;CL:0000066,1.17e-16,253;CL:0000150,1.03e-15,9;CL:0000317,8.86e-13,2;CL:1000448,8.86e-13,2;CL:0002308,8.86e-13,2;CL:0002140,8.86e-13,2;CL:0002327,1.06e-12,4;CL:0000362,2.91e-10,9;CL:0002159,6.83e-10,14;CL:0002621,3.50e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.78e-18;29 | |||
|ontology_enrichment_disease=DOID:305!1.05e-15!106;DOID:0050687!1.11e-11!143;DOID:4362!2.13e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.23e-13,106;DOID:0050687,6.21e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.18e-21!9;UBERON:0001004!3.97e-15!72;UBERON:0001557!6.12e-11!19;UBERON:0008947!3.67e-10!38;UBERON:0003258!3.67e-10!38;UBERON:0001911!1.30e-09!4;UBERON:0005333!1.30e-09!4;UBERON:0008425!1.30e-09!4;UBERON:0005311!1.30e-09!4;UBERON:0004119!1.43e-09!169;UBERON:0000925!1.43e-09!169;UBERON:0006595!1.43e-09!169;UBERON:0003729!1.77e-09!5;UBERON:0000065!2.84e-09!53;UBERON:0000072!6.31e-09!46;UBERON:0005631!8.41e-09!14;UBERON:0000158!8.41e-09!14;UBERON:0000161!1.42e-08!35;UBERON:0000166!2.79e-08!21;UBERON:0003343!6.43e-08!4;UBERON:0004785!6.43e-08!4;UBERON:0001007!1.05e-07!155;UBERON:0001555!1.05e-07!155;UBERON:0007026!1.05e-07!155;UBERON:0003102!2.01e-07!95;UBERON:0000064!2.06e-07!219;UBERON:0003124!2.18e-07!7;UBERON:0001949!2.36e-07!3;UBERON:0003100!3.00e-07!41;UBERON:0000344!4.40e-07!12;UBERON:0000165!6.99e-07!28;UBERON:0000930!6.99e-07!28;UBERON:0000077!9.72e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.18e-50;9!UBERON:0001557;4.18e-50;9!UBERON:0000072;6.96e-16;37!UBERON:0000065;1.74e-13;44!UBERON:0001911;9.37e-13;4!UBERON:0002419;9.65e-13;2!UBERON:0007771;9.65e-13;2!UBERON:0003297;9.65e-13;2!UBERON:0001821;9.65e-13;2!UBERON:0003487;9.65e-13;2!UBERON:0001820;9.65e-13;2!UBERON:0001004;2.80e-11;65!UBERON:0002365;1.55e-10;31!UBERON:0002330;1.55e-10;31!UBERON:0001044;4.51e-09;6!UBERON:0003293;4.51e-09;6!UBERON:0003294;4.51e-09;6!UBERON:0010047;4.51e-09;6!UBERON:0003408;4.51e-09;6!UBERON:0000167;4.51e-09;6!UBERON:0001949;3.76e-08;3!UBERON:0000161;3.98e-07;19!UBERON:0000166;3.98e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.53e-50,9;UBERON:0001557,4.72e-23,19;UBERON:0008947,3.78e-16,38;UBERON:0003258,3.78e-16,38;UBERON:0001004,4.00e-16,74;UBERON:0002419,8.86e-13,2;UBERON:0007771,8.86e-13,2;UBERON:0003297,8.86e-13,2;UBERON:0001821,8.86e-13,2;UBERON:0003487,8.86e-13,2;UBERON:0001820,8.86e-13,2;UBERON:0005089,8.86e-13,2;UBERON:0005088,8.86e-13,2;UBERON:0001911,1.06e-12,4;UBERON:0005333,1.06e-12,4;UBERON:0008425,1.06e-12,4;UBERON:0005311,1.06e-12,4;UBERON:0000072,1.19e-12,47;UBERON:0000065,9.73e-11,54;UBERON:0002365,2.49e-10,31;UBERON:0002330,2.49e-10,31;UBERON:0001041,6.62e-10,87;UBERON:0001007,9.00e-10,145;UBERON:0001555,9.00e-10,145;UBERON:0007026,9.00e-10,145;UBERON:0004119,1.40e-09,160;UBERON:0000925,1.40e-09,160;UBERON:0006595,1.40e-09,160;UBERON:0001044,5.79e-09,6;UBERON:0003293,5.79e-09,6;UBERON:0003294,5.79e-09,6;UBERON:0010047,5.79e-09,6;UBERON:0000167,5.79e-09,6;UBERON:0004921,9.61e-09,118;UBERON:0001949,3.50e-08,3;UBERON:0002530,1.36e-07,59;UBERON:0001048,1.41e-07,160 | |||
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| ||
|short_description=p18@TFAP2A | |short_description=p18@TFAP2A | ||
}} | }} |
Latest revision as of 13:09, 19 September 2015
Short description: | p18@TFAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TFAP2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -393bp_to_ENST00000473652_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.07e-28 | 5 |
protein secreting cell | 1.18e-23 | 6 |
acinar cell of salivary gland | 2.02e-17 | 3 |
epithelial cell | 1.17e-16 | 253 |
glandular epithelial cell | 1.03e-15 | 9 |
sebum secreting cell | 8.86e-13 | 2 |
epithelial cell of sweat gland | 8.86e-13 | 2 |
epithelial cell of skin gland | 8.86e-13 | 2 |
acinar cell of sebaceous gland | 8.86e-13 | 2 |
mammary gland epithelial cell | 1.06e-12 | 4 |
epidermal cell | 2.91e-10 | 9 |
general ecto-epithelial cell | 6.83e-10 | 14 |
gingival epithelial cell | 3.50e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.53e-50 | 9 |
upper respiratory tract | 4.72e-23 | 19 |
respiratory primordium | 3.78e-16 | 38 |
endoderm of foregut | 3.78e-16 | 38 |
respiratory system | 4.00e-16 | 74 |
skin gland | 8.86e-13 | 2 |
epidermis gland | 8.86e-13 | 2 |
gland of integumental system | 8.86e-13 | 2 |
sebaceous gland | 8.86e-13 | 2 |
skin sebaceous gland | 8.86e-13 | 2 |
sweat gland | 8.86e-13 | 2 |
sweat gland placode | 8.86e-13 | 2 |
sebaceous gland placode | 8.86e-13 | 2 |
mammary gland | 1.06e-12 | 4 |
mammary bud | 1.06e-12 | 4 |
mammary ridge | 1.06e-12 | 4 |
mammary placode | 1.06e-12 | 4 |
segment of respiratory tract | 1.19e-12 | 47 |
respiratory tract | 9.73e-11 | 54 |
exocrine gland | 2.49e-10 | 31 |
exocrine system | 2.49e-10 | 31 |
foregut | 6.62e-10 | 87 |
digestive system | 9.00e-10 | 145 |
digestive tract | 9.00e-10 | 145 |
primitive gut | 9.00e-10 | 145 |
endoderm-derived structure | 1.40e-09 | 160 |
endoderm | 1.40e-09 | 160 |
presumptive endoderm | 1.40e-09 | 160 |
saliva-secreting gland | 5.79e-09 | 6 |
gland of oral region | 5.79e-09 | 6 |
gland of foregut | 5.79e-09 | 6 |
oral gland | 5.79e-09 | 6 |
oral cavity | 5.79e-09 | 6 |
subdivision of digestive tract | 9.61e-09 | 118 |
gingival epithelium | 3.50e-08 | 3 |
gland | 1.36e-07 | 59 |
primordium | 1.41e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.23e-13 | 106 |
cell type cancer | 6.21e-09 | 143 |