FFCP PHASE1:Hg19::chr7:76039000..76039047,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=136853 | |EntrezGene=136853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14461 | |HGNC=14461 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WTU2 | |UniProt=Q8WTU2 | ||
|association_with_transcript=0bp_to_ENST00000275560,NM_080744,uc003ufb.2_5end | |association_with_transcript=0bp_to_ENST00000275560,NM_080744,uc003ufb.2_5end | ||
|cluster_id=chr7:76039000..76039047,- | |||
|coexpression_cluster_id=C886 | |||
|description=CAGE_peak_1_at_SRCRB4D_5end | |description=CAGE_peak_1_at_SRCRB4D_5end | ||
|id=chr7:76039000..76039047,- | |id=chr7:76039000..76039047,- | ||
|ontology_enrichment_celltype=CL:0000066!7.37e-15!254;CL:0002368!1.77e-08!13;CL:0002322!4.92e-07!5;CL:0002076!8.36e-07!43 | |ontology_enrichment_celltype=CL:0000066!7.37e-15!254;CL:0002368!1.77e-08!13;CL:0002322!4.92e-07!5;CL:0002076!8.36e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.77e-13;5!CL:1000507;5.98e-10;10!CL:1000494;5.98e-10;10!CL:0002368;1.22e-09;13!CL:1000497;3.43e-07;17!CL:0002518;3.43e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.86e-15,253;CL:0002322,5.94e-13,5;CL:1000507,4.12e-10,10;CL:1000494,4.12e-10,10;CL:0002368,1.44e-09,13;CL:0000223,3.35e-09,58;CL:1000497,2.71e-07,17;CL:0002518,2.71e-07,17;CL:0002076,4.92e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.83e-07;11!UBERON:0007123;1.95e-07;5!UBERON:0001041;3.32e-07;30!UBERON:0003104;5.48e-07;31!CL:0000223;9.17e-07;58 | |||
|ontology_enrichment_disease=DOID:305!6.60e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.36e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000466!5.85e-13!126;UBERON:0000464!4.26e-11!104;UBERON:0005177!6.08e-11!107;UBERON:0005172!3.80e-08!55;UBERON:0005173!3.80e-08!55;UBERON:0001048!5.80e-08!168;UBERON:0002113!1.20e-07!27;UBERON:0003918!1.20e-07!27;UBERON:0005095!1.20e-07!27;UBERON:0007687!1.20e-07!27;UBERON:0002553!1.46e-07!70;UBERON:0009569!1.85e-07!113;UBERON:0003133!2.14e-07!48;UBERON:0004119!2.57e-07!169;UBERON:0000925!2.57e-07!169;UBERON:0006595!2.57e-07!169;UBERON:0003886!3.69e-07!63 | |ontology_enrichment_uberon=UBERON:0000466!5.85e-13!126;UBERON:0000464!4.26e-11!104;UBERON:0005177!6.08e-11!107;UBERON:0005172!3.80e-08!55;UBERON:0005173!3.80e-08!55;UBERON:0001048!5.80e-08!168;UBERON:0002113!1.20e-07!27;UBERON:0003918!1.20e-07!27;UBERON:0005095!1.20e-07!27;UBERON:0007687!1.20e-07!27;UBERON:0002553!1.46e-07!70;UBERON:0009569!1.85e-07!113;UBERON:0003133!2.14e-07!48;UBERON:0004119!2.57e-07!169;UBERON:0000925!2.57e-07!169;UBERON:0006595!2.57e-07!169;UBERON:0003886!3.69e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;5.98e-10;10!UBERON:0009773;5.98e-10;10!UBERON:0001231;5.98e-10;10!UBERON:0004810;5.98e-10;10!UBERON:0002368;2.16e-09;33!UBERON:0002113;5.98e-09;24!UBERON:0011143;5.98e-09;24!UBERON:0000991;1.03e-07;21!UBERON:0002046;1.95e-07;5!UBERON:0000489;5.23e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.71e-13,101;UBERON:0005172,1.84e-10,54;UBERON:0005173,1.84e-10,54;UBERON:0004810,4.12e-10,10;UBERON:0002113,6.15e-10,26;UBERON:0003918,6.15e-10,26;UBERON:0011143,6.15e-10,26;UBERON:0005095,6.15e-10,26;UBERON:0007687,6.15e-10,26;UBERON:0002368,1.89e-09,35;UBERON:0009569,2.81e-09,112;UBERON:0000949,5.77e-09,45;UBERON:0002417,6.10e-09,60;UBERON:0000916,6.10e-09,60;UBERON:0002530,6.42e-09,59;UBERON:0006554,2.42e-08,47;UBERON:0001008,4.32e-08,48;UBERON:0000489,6.71e-08,31;UBERON:0000991,1.19e-07,21;UBERON:0009196,1.19e-07,21;UBERON:0009117,1.19e-07,21;UBERON:0005564,1.19e-07,21;UBERON:0002046,1.82e-07,5;UBERON:0004117,1.82e-07,5;UBERON:0007689,1.82e-07,5;UBERON:0007123,1.82e-07,5;UBERON:0003091,1.82e-07,5;UBERON:0004176,3.20e-07,22;UBERON:0001048,5.92e-07,160;UBERON:0005911,6.56e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,1.74753097704138,6.06664049925443,0,0.331397375727916,0,0,0,0,0,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0.919421224478927,10.2410012384605,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.665188192387692,1.49319135678314,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,8.66013313520127,13.5180363687915,11.1546185154738,12.2320044918137,8.57890892977137,18.2488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,5.411491295897,0,0.439001141634502,0,0,1.85176890317059,0,0,0,0.463721619900307,0.587043471179108,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0.542530047399471,0.415941723061614,0,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0.587403472388222,0,0,0,0,0,4.99306318531491,3.0239029332968,0,0,0,0,0,0,0,0,0,0,0,0,2.41718899183244,1.20303882181971,0,0,0,0.524497659837696,1.80479845162965,1.5403067420883,0.784349769176855,1.46139224653261,2.32213583564327,0,0,0,0,1.89662506280697,19.0642114064844,0,4.98645605357235,0.895499018888713,0,0,0,0.984043937099117,0.325378394664303,0.412164046590889,0,0,0.574265537996172,1.95018073810956,0,0,0,0,0,0.107420244868274,0.290033387828457,0,0.178064071293475,1.15699440752685,3.45942121257191,1.40373983744043,0.910420027699949,0,0,0,0,0,0,0,0,0.372158369359667,0.949138274156178,0,0,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0.384888450902048,2.01090682660736,2.17781969722645,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,1.81600920916704,0,4.90080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,4.23484860254418,0,0,1.48482340416319,0,0,0,2.33748280548102,0,0.211125408127993,0.398495976502139,0,0,1.1249555075237,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,1.5255219017566,0,0,0.583209226766509,0,0,0,0,0,0,0.219385397153973,0.544692317594951,0,0.307801034015188,0,0,0.179515288819544,0.760531603454056,0.31900115973192,0.0915975934018623,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0,1.26598838716816,1.46909527343233,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,1.57833761139756,0,0.61214552326098,0.695052375913368,0.150323419414493,0,0,0,0.313932918407225,2.38944859545918,31.3070500632772,0,0,0.195984794828755,2.96001302373369,0.34945333648406,0,0,0,0,0,0,0,0.411125773940253,0,0,0.782205530939212,0.0801588202515337,0,0.19980960958213,0,0,0.514784993585894,0,0,0,0.271808412147228,0.836822770498666,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4743924291181,6.61778731380679,7.91192240459198,7.21217919239778,2.16540459332447,0,0,0,19.1296246673373,14.9917985890985,14.9558521690507,0,0,0,0,2.99461687736953,3.40954822877488,0,0,62.7562695234586,0,0,0,0,0,0,4.7892076624995,0,0,0,0,3.97520666736664,0.129282956361551,0,0,2.11444506695002,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.0620964029413835,0.276697269872462,0.499921631848426,0,0,0.705797459094515,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0.796483835818512,0,2.01841843939137,0,0,1.04349012362347,0,0,1.22061219961398,0,10.3114134760789,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.489473409012935,0.179088841081487,12.0432564392779,0.877136198314828,0,1.3503982678964,0,0,0,0.303859956177382,0,0,0,0,0,10.3224621676562,0.211312123358627,0,0,0,0,0,0,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0.322951291263702,0,0.294443155503077,0,0.733714394086716,0,0,0,0,0.902523940191087,0,2.34454203369928,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,3.83780436800028,0,0,0.766574565837572,1.07140367175657,0,1.82089681270989,2.50428410486427,0.177404740325278,0,0,0.0679697329768317,0,0,0,0,0,0,0,11.6600899258056,0,0.357382720883282,0.632054446930906,0,14.0825200565089,0.801711364730253,0,0,0,0.860454717640555,0,0,4.23387050190929,0.9164274741762,0,0,6.04019331708079,0,0,0,0,0,0,0.233939463462106,1.39265542612958,0,0.11294608203896,5.05726377028974,0.905777061400041,0,0.218559560503957,0,0,0,0.392616934229891,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0.917458566809082,0,0,0,0,1.0580536810308,0.371995018166751,0,0,12.8689753331781,11.9099473440428,1.0135880080915,7.95512871987458,7.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| ||
|short_description=p1@SRCRB4D | |short_description=p1@SRCRB4D | ||
}} | }} |
Latest revision as of 13:59, 19 September 2015
Short description: | p1@SRCRB4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SRCRB4D_5end |
Coexpression cluster: | C886_large_endometrial_Fibroblast_renal_hepatoblastoma_hepatocellular_squamous |
Association with transcript: | 0bp_to_ENST00000275560, NM_080744, uc003ufb.2_5end |
EntrezGene: | SRCRB4D |
HGNC: | 14461 |
UniProt: | Q8WTU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.86e-15 | 253 |
embryonic stem cell | 5.94e-13 | 5 |
kidney tubule cell | 4.12e-10 | 10 |
nephron tubule epithelial cell | 4.12e-10 | 10 |
respiratory epithelial cell | 1.44e-09 | 13 |
endodermal cell | 3.35e-09 | 58 |
kidney cell | 2.71e-07 | 17 |
kidney epithelial cell | 2.71e-07 | 17 |
endo-epithelial cell | 4.92e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 3.71e-13 | 101 |
abdomen element | 1.84e-10 | 54 |
abdominal segment element | 1.84e-10 | 54 |
nephron tubule epithelium | 4.12e-10 | 10 |
kidney | 6.15e-10 | 26 |
kidney mesenchyme | 6.15e-10 | 26 |
upper urinary tract | 6.15e-10 | 26 |
kidney rudiment | 6.15e-10 | 26 |
kidney field | 6.15e-10 | 26 |
endocrine gland | 1.89e-09 | 35 |
subdivision of trunk | 2.81e-09 | 112 |
endocrine system | 5.77e-09 | 45 |
abdominal segment of trunk | 6.10e-09 | 60 |
abdomen | 6.10e-09 | 60 |
gland | 6.42e-09 | 59 |
urinary system structure | 2.42e-08 | 47 |
renal system | 4.32e-08 | 48 |
cavitated compound organ | 6.71e-08 | 31 |
gonad | 1.19e-07 | 21 |
indifferent external genitalia | 1.19e-07 | 21 |
indifferent gonad | 1.19e-07 | 21 |
gonad primordium | 1.19e-07 | 21 |
thyroid gland | 1.82e-07 | 5 |
pharyngeal pouch | 1.82e-07 | 5 |
thyroid diverticulum | 1.82e-07 | 5 |
pharyngeal pouch 2 | 1.82e-07 | 5 |
thyroid primordium | 1.82e-07 | 5 |
external genitalia | 3.20e-07 | 22 |
primordium | 5.92e-07 | 160 |
endo-epithelium | 6.56e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.36e-08 | 106 |