FFCP PHASE1:Hg19::chr12:57849247..57849272,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83729 | |EntrezGene=83729 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24029 | |HGNC=24029 | ||
|TSSclassifier=strong | |||
|UniProt=P58166 | |UniProt=P58166 | ||
|association_with_transcript=143bp_to_ENST00000266646_5end | |association_with_transcript=143bp_to_ENST00000266646_5end | ||
|cluster_id=chr12:57849247..57849272,+ | |||
|coexpression_cluster_id=C3307 | |||
|description=CAGE_peak_3_at_INHBE_5end | |description=CAGE_peak_3_at_INHBE_5end | ||
|id=chr12:57849247..57849272,+ | |id=chr12:57849247..57849272,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.30e-08!12;CL:0000417!2.30e-08!12;CL:0000668!2.30e-08!12;CL:0000414!2.30e-08!12;CL:0000412!2.30e-08!12;CL:0000182!2.30e-08!12 | |ontology_enrichment_celltype=CL:0000181!2.30e-08!12;CL:0000417!2.30e-08!12;CL:0000668!2.30e-08!12;CL:0000414!2.30e-08!12;CL:0000412!2.30e-08!12;CL:0000182!2.30e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.58e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.08e-17,12;CL:0000785,1.70e-07,2;CL:0000955,1.70e-07,2;CL:0000818,1.70e-07,2;CL:0000954,1.70e-07,2;CL:0000816,1.70e-07,2;CL:0000223,3.96e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.86e-15;13!UBERON:0004161;2.44e-14;11!UBERON:0001041;1.12e-11;30!CL:0000954;2.07e-07;2!UBERON:0003104;3.64e-07;31 | |||
|ontology_enrichment_disease=DOID:162!1.09e-16!235;DOID:14566!8.11e-16!239;DOID:0050687!3.06e-13!143;DOID:305!1.37e-09!106;DOID:0050686!1.45e-08!137;DOID:3119!7.36e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:3119;3.89e-11;14!DOID:5409;6.31e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.77e-14,235;DOID:14566,5.63e-14,239;DOID:0050687,1.23e-11,143;DOID:3119,5.51e-11,14;DOID:5409,6.59e-09,4;DOID:305,7.19e-09,106;DOID:0050686,1.85e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002107!1.05e-09!19;UBERON:0006925!1.05e-09!19;UBERON:0008836!1.05e-09!19;UBERON:0008835!2.80e-09!22;UBERON:0003894!2.80e-09!22;UBERON:0009854!1.09e-08!23;UBERON:0007499!1.17e-07!25;UBERON:0009497!1.17e-07!25;UBERON:0000015!1.17e-07!25;UBERON:0002423!1.17e-07!25;UBERON:0006235!1.17e-07!25;UBERON:0004161!1.17e-07!25;UBERON:0005057!3.28e-07!26;UBERON:0009856!3.31e-07!26;UBERON:0002368!8.75e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.48e-16;19!UBERON:0006925;1.48e-16;19!UBERON:0002423;1.43e-14;25!UBERON:0002368;1.31e-09;33!UBERON:0002365;3.53e-09;31!UBERON:0002330;3.53e-09;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,5.98e-17,22;UBERON:0003894,5.98e-17,22;UBERON:0002107,1.18e-16,19;UBERON:0006925,1.18e-16,19;UBERON:0008836,1.18e-16,19;UBERON:0009854,4.16e-16,23;UBERON:0007499,1.26e-14,25;UBERON:0009497,1.26e-14,25;UBERON:0000015,1.26e-14,25;UBERON:0002423,1.26e-14,25;UBERON:0006235,1.26e-14,25;UBERON:0004161,1.26e-14,25;UBERON:0009856,5.71e-14,26;UBERON:0002368,9.64e-12,35;UBERON:0002365,2.09e-09,31;UBERON:0002330,2.09e-09,31;UBERON:0000949,1.49e-08,45;UBERON:0003929,7.90e-08,54;UBERON:0005911,4.90e-07,82 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0.940364164434263,0,0,0,0.0764134057479513,0.164201178899891,0,0,0,0,0,0,0,0.619737604642413,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,1.64025002283658,0,0,0,0.23486899728753,0.485618833104395,0,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0.635795703478686,0,0.103052529238439,0.515281080091258,0,0,0.194874010322397,0,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0.365921118388786,0.132529768321485,0.929551542956147,0.310983165046111,1.7662459561294,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,10.1404027857465,7.86261773342101,8.86184860022106,0,0.122988438543114,0,0,0,0,0,0.977424915930974,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0.574072240823034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,2.26690225624989,0,0,0,0,0,1.83674364755032,0,0,0,0.537101224341368,0,0,1.15741646340759,0.165284915360978,0,0,0.10115778085555,0.464845549297286,4.40737285562896,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,1.39973888097993,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,1.13826949357463,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.84699191581699,0,0,0,0,0,0,1.89453753271713,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0.20453736500431,0.492339221844278,0,0,1.25314822272926,0,0,0,0,0.969332746095218,0.0927680981618513,0,1.04171104434093,0,0,0,0,0,2.06846023944879,1.45802306691627,0,0,0,0,0,0.295547618953547,0,3.70390775964567,0.139423744278603,0,0.341826167541004,0,0.0897576444097721,0.217294743844016,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0,1.08194319871046,0,0,0.611030144933625,2.07564790076435,1.85345908419754,0.939797545549098,0,0,0,1.45963831372533,0.586993856796269,0.242780379534093,0,0,0,0,0,0.103688191397247,0,0,0,0,3.9845336444171,0.416024019039416,0,0.195984794828755,0.0870592065804026,0,0,0,0.511625219603299,0.164230914106418,0.0969890164884194,0,0,1.23337732182076,0,0,0,0,0,0,3.31407959454444,0,3.60349495510126,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,1.16495949527454,1.89079637537337,1.56590130924216,1.41547442093788,4.72451911270794,3.30225995056559,0,0,0.482259445395058,0.550157746388935,0.415440338029185,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,1.80603545648546,0,0,10.9914175258562,3.97520666736664,0,0,0.342173675768659,0,0,0,0,0,0,0,4.46838880439127,0,0,0,0,0.628216385000937,0,0,0,0,0,0,9.96110171540862,0,0,0,0.235265819698172,0.936669811613763,0,0,1.16856654923612,0,0,0,0,0.228840068396924,0,0,0,0,0.899606224327209,0.310525913752519,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,1.04397716786085,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,4.58653788384978,0.737318726261158,0.422624246717254,0.39997479170986,0,7.23302914575426,0,0,0,0,8.82471161995197,0,0.471797825567689,0.218419276384028,0.169732529954025,0,0,0,0.636008701306837,0.788617450012533,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0.196295437002051,3.65706142377995,0,0,0,0,0.397832444232549,0,1.61364054962816,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,1.40538670403555,2.67850917939143,0,0,0,0,1.49804183822513,0,0.135939465953663,0,0,0,0,0,0.840816489941367,0,0,0,0,2.3702041759909,0,9.04063015973413,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0.467878926924211,1.19370465096821,0,3.50132854320776,5.16720428703517,10.8693247368005,0,0,11.7579324090381,0,4.94920748913415,0,0,0,0.169927114687817,0,0,0,1.78553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0.126698501011437,0.305966489225945,1.3360870263278,0,0,0,0,0,0,0.426467963801962,0.23806443146374,0,0,0.224263725161227,0,0.202117188958219,0.217716747896961,0.684466602170562,0,0,0,0,0.533636729388577,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0.940364164434263,0,0,0,0.0764134057479513,0.164201178899891,0,0,0,0,0,0,0,0.619737604642413,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,1.64025002283658,0,0,0,0.23486899728753,0.485618833104395,0,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0.635795703478686,0,0.103052529238439,0.515281080091258,0,0,0.194874010322397,0,0.0920498986422993,0,0,0.201504196455281,0,0,0,0,0.365921118388786,0.132529768321485,0.929551542956147,0.310983165046111,1.7662459561294,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,10.1404027857465,7.86261773342101,8.86184860022106,0,0.122988438543114,0,0,0,0,0,0.977424915930974,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0.0920809889358963,0.574072240823034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,2.26690225624989,0,0,0,0,0,1.83674364755032,0,0,0,0.537101224341368,0,0,1.15741646340759,0.165284915360978,0,0,0.10115778085555,0.464845549297286,4.40737285562896,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,1.39973888097993,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,1.13826949357463,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.84699191581699,0,0,0,0,0,0,1.89453753271713,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0.20453736500431,0.492339221844278,0,0,1.25314822272926,0,0,0,0,0.969332746095218,0.0927680981618513,0,1.04171104434093,0,0,0,0,0,2.06846023944879,1.45802306691627,0,0,0,0,0,0.295547618953547,0,3.70390775964567,0.139423744278603,0,0.341826167541004,0,0.0897576444097721,0.217294743844016,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0,1.08194319871046,0,0,0.611030144933625,2.07564790076435,1.85345908419754,0.939797545549098,0,0,0,1.45963831372533,0.586993856796269,0.242780379534093,0,0,0,0,0,0.103688191397247,0,0,0,0,3.9845336444171,0.416024019039416,0,0.195984794828755,0.0870592065804026,0,0,0,0.511625219603299,0.164230914106418,0.0969890164884194,0,0,1.23337732182076,0,0,0,0,0,0,3.31407959454444,0,3.60349495510126,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,1.16495949527454,1.89079637537337,1.56590130924216,1.41547442093788,4.72451911270794,3.30225995056559,0,0,0.482259445395058,0.550157746388935,0.415440338029185,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,1.80603545648546,0,0,10.9914175258562,3.97520666736664,0,0,0.342173675768659,0,0,0,0,0,0,0,4.46838880439127,0,0,0,0,0.628216385000937,0,0,0,0,0,0,9.96110171540862,0,0,0,0.235265819698172,0.936669811613763,0,0,1.16856654923612,0,0,0,0,0.228840068396924,0,0,0,0,0.899606224327209,0.310525913752519,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,1.04397716786085,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,4.58653788384978,0.737318726261158,0.422624246717254,0.39997479170986,0,7.23302914575426,0,0,0,0,8.82471161995197,0,0.471797825567689,0.218419276384028,0.169732529954025,0,0,0,0.636008701306837,0.788617450012533,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0.196295437002051,3.65706142377995,0,0,0,0,0.397832444232549,0,1.61364054962816,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,1.40538670403555,2.67850917939143,0,0,0,0,1.49804183822513,0,0.135939465953663,0,0,0,0,0,0.840816489941367,0,0,0,0,2.3702041759909,0,9.04063015973413,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0.467878926924211,1.19370465096821,0,3.50132854320776,5.16720428703517,10.8693247368005,0,0,11.7579324090381,0,4.94920748913415,0,0,0,0.169927114687817,0,0,0,1.78553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0.126698501011437,0.305966489225945,1.3360870263278,0,0,0,0,0,0,0.426467963801962,0.23806443146374,0,0,0.224263725161227,0,0.202117188958219,0.217716747896961,0.684466602170562,0,0,0,0,0.533636729388577,0,0,0,0,0,0,0,0 | ||
|short_description=p3@INHBE | |short_description=p3@INHBE | ||
}} | }} |
Latest revision as of 14:23, 19 September 2015
Short description: | p3@INHBE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_INHBE_5end |
Coexpression cluster: | C3307_smallcell_Hepatocyte_somatostatinoma_liver_medulloblastoma_acute_neuroblastoma |
Association with transcript: | 143bp_to_ENST00000266646_5end |
EntrezGene: | INHBE |
HGNC: | 24029 |
UniProt: | P58166 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.08e-17 | 12 |
mature B cell | 1.70e-07 | 2 |
pre-B-II cell | 1.70e-07 | 2 |
transitional stage B cell | 1.70e-07 | 2 |
small pre-B-II cell | 1.70e-07 | 2 |
immature B cell | 1.70e-07 | 2 |
endodermal cell | 3.96e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 5.98e-17 | 22 |
liver primordium | 5.98e-17 | 22 |
liver | 1.18e-16 | 19 |
digestive gland | 1.18e-16 | 19 |
liver bud | 1.18e-16 | 19 |
digestive tract diverticulum | 4.16e-16 | 23 |
epithelial sac | 1.26e-14 | 25 |
epithelium of foregut-midgut junction | 1.26e-14 | 25 |
anatomical boundary | 1.26e-14 | 25 |
hepatobiliary system | 1.26e-14 | 25 |
foregut-midgut junction | 1.26e-14 | 25 |
septum transversum | 1.26e-14 | 25 |
sac | 5.71e-14 | 26 |
endocrine gland | 9.64e-12 | 35 |
exocrine gland | 2.09e-09 | 31 |
exocrine system | 2.09e-09 | 31 |
endocrine system | 1.49e-08 | 45 |
gut epithelium | 7.90e-08 | 54 |
endo-epithelium | 4.90e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.77e-14 | 235 |
disease of cellular proliferation | 5.63e-14 | 239 |
cell type cancer | 1.23e-11 | 143 |
gastrointestinal system cancer | 5.51e-11 | 14 |
lung small cell carcinoma | 6.59e-09 | 4 |
carcinoma | 7.19e-09 | 106 |
organ system cancer | 1.85e-07 | 137 |