FFCP PHASE1:Hg19::chr19:52034995..52035012,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:52034995..52035012,-
|short_description=p4@SIGLEC6
|description=CAGE_peak_4_at_SIGLEC6_5end
|association_with_transcript=-24bp_to_ENST00000346477_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=946 | |EntrezGene=946 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10875 | |HGNC=10875 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENST00000346477_5end | |||
|cluster_id=chr19:52034995..52035012,- | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_4_at_SIGLEC6_5end | |||
|id=chr19:52034995..52035012,- | |||
|ontology_enrichment_celltype=CL:0000236!1.20e-14!14;CL:0000037!3.56e-14!172;CL:0000566!3.56e-14!172;CL:0002274!8.54e-13!5;CL:0000457!8.54e-13!5;CL:0002191!8.54e-13!5;CL:0000097!8.54e-13!5;CL:0000831!8.54e-13!5;CL:0002028!8.54e-13!5;CL:0000988!9.84e-13!182;CL:0002032!7.05e-12!165;CL:0000837!7.05e-12!165;CL:0000763!1.50e-08!112;CL:0000049!1.50e-08!112;CL:0002541!1.12e-07!3;CL:0000945!1.46e-07!24;CL:0000826!1.46e-07!24;CL:0000784!2.52e-07!3;CL:0000163!7.99e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.10e-31;5!CL:0000236;2.28e-27;13!CL:0000163;2.28e-17;9!CL:0000945;2.61e-14;24!CL:0002541;9.78e-09;3!CL:0002032;5.84e-07;1!CL:0000557;5.84e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.10e-31,5;CL:0002028,2.10e-31,5;CL:0000236,1.92e-25,14;CL:0000163,2.28e-17,9;CL:0000037,6.39e-17,168;CL:0002032,2.91e-16,161;CL:0000837,2.91e-16,161;CL:0000988,8.31e-16,177;CL:0000945,2.27e-14,24;CL:0000826,2.27e-14,24;CL:0000763,8.43e-11,108;CL:0000049,8.43e-11,108;CL:0002541,9.40e-09,3;CL:0000134,7.96e-07,354 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.36e-07;1!UBERON:0006242;5.84e-07;1 | |||
|ontology_enrichment_disease=DOID:8692!5.64e-21!31;DOID:1240!4.20e-19!39;DOID:2531!3.30e-13!51;DOID:0060083!3.30e-13!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.86e-16;31!DOID:1240;4.25e-10;39!DOID:8552;1.97e-07;1!DOID:1036;2.19e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.78e-17,31;DOID:1240,1.59e-13,39;DOID:2531,6.28e-10,51;DOID:0060083,6.28e-10,51;DOID:8552,1.97e-07,1;DOID:1036,2.15e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.68e-10!115;UBERON:0000476!1.12e-07!3;UBERON:0000920!1.12e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;9.78e-09;3!UBERON:0000920;9.78e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,9.40e-09,3;UBERON:0003124,3.07e-08,7 | |||
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| ||
|short_description=p4@SIGLEC6 | |||
}} | }} |
Latest revision as of 15:21, 19 September 2015
Short description: | p4@SIGLEC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SIGLEC6_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | -24bp_to_ENST00000346477_5end |
EntrezGene: | SIGLEC6 |
HGNC: | 10875 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.10e-31 | 5 |
basophil mast progenitor cell | 2.10e-31 | 5 |
B cell | 1.92e-25 | 14 |
endocrine cell | 2.28e-17 | 9 |
hematopoietic stem cell | 6.39e-17 | 168 |
hematopoietic oligopotent progenitor cell | 2.91e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.91e-16 | 161 |
hematopoietic cell | 8.31e-16 | 177 |
lymphocyte of B lineage | 2.27e-14 | 24 |
pro-B cell | 2.27e-14 | 24 |
myeloid cell | 8.43e-11 | 108 |
common myeloid progenitor | 8.43e-11 | 108 |
chorionic membrane mesenchymal stem cell | 9.40e-09 | 3 |
mesenchymal cell | 7.96e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 9.40e-09 | 3 |
chorion | 3.07e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.78e-17 | 31 |
leukemia | 1.59e-13 | 39 |
hematologic cancer | 6.28e-10 | 51 |
immune system cancer | 6.28e-10 | 51 |
chronic myeloid leukemia | 1.97e-07 | 1 |
chronic leukemia | 2.15e-07 | 8 |