FFCP PHASE1:Hg19::chr14:25103431..25103449,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3002 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4709 | |||
|TSSclassifier=strong | |||
|UniProt=P10144,Q67BC3 | |||
|association_with_transcript=0bp_to_NM_004131,uc001wps.2,uc010ama.2,uc010amb.2_5end | |||
|cluster_id=chr14:25103431..25103449,- | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_2_at_GZMB_5end | |||
|id=chr14:25103431..25103449,- | |||
|ontology_enrichment_celltype=CL:0000738!2.63e-30!140;CL:0002087!2.28e-24!119;CL:0002031!4.54e-22!124;CL:0000037!9.95e-22!172;CL:0000566!9.95e-22!172;CL:0000988!2.89e-19!182;CL:0002032!1.45e-18!165;CL:0000837!1.45e-18!165;CL:0000084!3.93e-16!25;CL:0000827!3.93e-16!25;CL:0000625!1.38e-15!11;CL:0000791!1.43e-15!18;CL:0000789!1.43e-15!18;CL:0002420!1.43e-15!18;CL:0002419!1.43e-15!18;CL:0000790!1.43e-15!18;CL:0002057!3.49e-14!42;CL:0000766!1.05e-13!76;CL:0000860!1.11e-12!45;CL:0000838!7.82e-12!52;CL:0000542!1.90e-11!53;CL:0000051!1.90e-11!53;CL:0002009!4.16e-11!65;CL:0000557!4.69e-11!71;CL:0002194!7.16e-11!63;CL:0000576!7.16e-11!63;CL:0000040!7.16e-11!63;CL:0000559!7.16e-11!63;CL:0000839!1.59e-10!70;CL:0000763!1.94e-08!112;CL:0000049!1.94e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.98e-31;11!CL:0000791;3.97e-29;18!CL:0000789;3.97e-29;18!CL:0002419;3.97e-29;18!CL:0000084;1.71e-26;25!CL:0000784;1.64e-10;3!CL:0000623;2.36e-10;3!CL:0000767;4.70e-10;3!CL:0000226;1.43e-09;3!CL:0000842;1.43e-09;3!CL:0000542;3.95e-09;53!CL:0002087;1.78e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.10e-31,11;CL:0000791,3.72e-29,18;CL:0000789,3.72e-29,18;CL:0002420,3.72e-29,18;CL:0002419,3.72e-29,18;CL:0000790,3.72e-29,18;CL:0000084,1.64e-26,25;CL:0000827,1.64e-26,25;CL:0000738,2.27e-22,136;CL:0000838,1.34e-17,52;CL:0000542,3.64e-17,53;CL:0000051,3.64e-17,53;CL:0002087,4.27e-17,115;CL:0000037,3.51e-16,168;CL:0000988,7.47e-15,177;CL:0002031,1.37e-13,120;CL:0002032,8.29e-12,161;CL:0000837,8.29e-12,161;CL:0000784,1.64e-10,3;CL:0000623,2.36e-10,3;CL:0000825,2.36e-10,3;CL:0000767,4.71e-10,3;CL:0000226,1.47e-09,3;CL:0000842,1.47e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.97e-29;18!CL:0000051;3.95e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.70e-19!102;UBERON:0003061!7.70e-19!102;UBERON:0002193!1.28e-17!112;UBERON:0007023!6.14e-14!115;UBERON:0000178!5.76e-12!15;UBERON:0000179!5.76e-12!15;UBERON:0000463!5.76e-12!15;UBERON:0002371!9.55e-09!80;UBERON:0001474!4.32e-08!86;UBERON:0002405!1.63e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.63e-25;15!UBERON:0000179;3.63e-25;15!UBERON:0000463;3.63e-25;15!UBERON:0002390;1.89e-13;32!UBERON:0002193;2.53e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.64e-25,15;UBERON:0000179,3.64e-25,15;UBERON:0000463,3.64e-25,15;UBERON:0002390,3.16e-11,98;UBERON:0003061,3.16e-11,98;UBERON:0002193,1.38e-10,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.6586556180115,102.866278690053,28.1765344435258,0,0,0,0,0,0,21.6058209327432,21.257711431835,29.5134784173558,1.11957737119962,2.26725566213286,0.515151135268373,0.872389432677388,0.755751887377619,0,0.464858073811369,0,0,0.28769239232215,0.512321413058201,0.47296445977717,2.75796544589295,0.645484683583826,0,0.564727018627814,0.272906150057846,0.224723484445085,2.14258724659632,0.641858054152187,0.639337125799041,0.329851300186716,0.398927315243264,0.426224750532694,0.870627715885752,0,0,1.00499466102697,0.521482918420201,0.217188844705117,0,0.736555271975129,0.632924774881769,0,0,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0.546138611262131,0,0.853460445133014,0,0,0,0,0,1.17447437874188,0,0,21.8598339562799,0.790152254325231,0.590129310341499,1.57204305099666,1.43921049299656,0,0,0,0,35.0942939188297,0,0,0,17.2923281629661,18.9886647437422,7.39970570716543,1.93445012450094,2.31842468588042,0.14828656316206,0.802622484269139,0,6.11870450566857,0,1.37450978193052,0.506039384039006,16.2468361305289,20.8346705234054,26.6126572445545,35.3851529832766,33.660478733612,21.2382235138988,36.4636968147786,62.4057277659995,51.0065060358573,72.208852861547,43.3024967609569,0,0,0,0,0,0.144846518960824,0,0,0,0,0.351339142772504,0.72038491523742,0,0,0,0,0,352.727633347601,406.116386653891,171.241908112929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445893486866185,0,0,0.141775097242386,0,0,0,30.5451207495485,0,0,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.1001826618575,128.069994131253,147.704888778769,144.385915814717,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,15.5076019592166,21.3557058810431,39.7026515028813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0.247528499761764,0,0,0,0,0,0,0,0,0.145016693914229,0.852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8589409885985,0,0,0,0,0,0.844430541190656,0,0,0,0,0.670302275535787,0,0.470719003883896,0,0,0,0,12.1787426215721,10.7049208999933,9.68400218196076,21.440859791201,18.5113022888787,6.48473311192717,11.3406601820004,15.8625035258854,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0.222886768554957,14.2068073403207,0,0.593929361665277,0,0,0,0,151.949172037072,0,0.398495976502139,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.394573622547734,45.5017875459186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.658156191461918,0,0,0.153900517007594,0,0,0,0,0,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,1.22206028986725,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,1.51647791108371,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.581934098930517,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0.429226048136571,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0.157611414598396,0,0,0,0,2.1440859791201,0,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,0,0,0,0,0,3.09683496446315,0,2.89967338743037,0.992332043623902,0.395223263795889,0,0,0.544017803369474,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.398594520940089,0,0,0,0,7.39953364663241,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,1.06442844195167,0.576169937778896,0,0,0.131545547125698,0,0,0.470958557103084,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,0,0,0,0.297046400327086,0,0,2.44358186747619,1.28915775947154,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.535928260312357,0,0,0.213233981900981,0,0.645889098360061,0.496597714366863,0,0.190941474834495,0.202117188958219,0.435433495793923,0,1.34704106029175,1.72133292942423,0,0,0,0,0,0,0.244482888365733,0,0,1.00636896795513,0 | |||
|short_description=p2@GZMB | |||
}} |
Latest revision as of 15:25, 19 September 2015
Short description: | p2@GZMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GZMB_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 0bp_to_NM_004131, uc001wps.2, uc010ama.2, uc010amb.2_5end |
EntrezGene: | GZMB |
HGNC: | 4709 |
UniProt: | P10144Q67BC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.10e-31 | 11 |
mature alpha-beta T cell | 3.72e-29 | 18 |
alpha-beta T cell | 3.72e-29 | 18 |
immature T cell | 3.72e-29 | 18 |
mature T cell | 3.72e-29 | 18 |
immature alpha-beta T cell | 3.72e-29 | 18 |
T cell | 1.64e-26 | 25 |
pro-T cell | 1.64e-26 | 25 |
leukocyte | 2.27e-22 | 136 |
lymphoid lineage restricted progenitor cell | 1.34e-17 | 52 |
lymphocyte | 3.64e-17 | 53 |
common lymphoid progenitor | 3.64e-17 | 53 |
nongranular leukocyte | 4.27e-17 | 115 |
hematopoietic stem cell | 3.51e-16 | 168 |
hematopoietic cell | 7.47e-15 | 177 |
hematopoietic lineage restricted progenitor cell | 1.37e-13 | 120 |
hematopoietic oligopotent progenitor cell | 8.29e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.29e-12 | 161 |
plasmacytoid dendritic cell | 1.64e-10 | 3 |
natural killer cell | 2.36e-10 | 3 |
pro-NK cell | 2.36e-10 | 3 |
basophil | 4.71e-10 | 3 |
single nucleate cell | 1.47e-09 | 3 |
mononuclear cell | 1.47e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.64e-25 | 15 |
haemolymphatic fluid | 3.64e-25 | 15 |
organism substance | 3.64e-25 | 15 |
hematopoietic system | 3.16e-11 | 98 |
blood island | 3.16e-11 | 98 |
hemolymphoid system | 1.38e-10 | 108 |