FFCP PHASE1:Hg19::chr14:25103472..25103483,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3002 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4709 | |||
|TSSclassifier=strong | |||
|UniProt=P10144,E7EUV0 | |||
|association_with_transcript=0bp_to_ENST00000216341,ENST00000382540,ENST00000382542_5end | |||
|cluster_id=chr14:25103472..25103483,- | |||
|description=CAGE_peak_3_at_GZMB_5end | |||
|id=chr14:25103472..25103483,- | |||
|ontology_enrichment_celltype=CL:0000738!1.79e-24!140;CL:0002087!2.14e-20!119;CL:0000625!8.32e-18!11;CL:0002031!1.02e-17!124;CL:0000037!1.68e-16!172;CL:0000566!1.68e-16!172;CL:0000988!1.25e-14!182;CL:0000084!1.56e-13!25;CL:0000827!1.56e-13!25;CL:0002032!1.84e-13!165;CL:0000837!1.84e-13!165;CL:0000766!5.99e-13!76;CL:0000791!1.29e-11!18;CL:0000789!1.29e-11!18;CL:0002420!1.29e-11!18;CL:0002419!1.29e-11!18;CL:0000790!1.29e-11!18;CL:0002057!2.16e-11!42;CL:0000839!2.54e-10!70;CL:0002194!2.56e-10!63;CL:0000576!2.56e-10!63;CL:0000040!2.56e-10!63;CL:0000559!2.56e-10!63;CL:0000860!3.26e-10!45;CL:0000557!4.59e-10!71;CL:0002009!9.02e-10!65;CL:0000838!1.66e-08!52;CL:0000542!3.13e-08!53;CL:0000051!3.13e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.45e-36;11!CL:0000084;1.01e-27;25!CL:0000791;1.31e-25;18!CL:0000789;1.31e-25;18!CL:0002419;1.31e-25;18!CL:0000784;4.63e-12;3!CL:0000623;6.61e-12;3!CL:0000767;1.68e-11;3!CL:0000542;6.48e-11;53!CL:0000226;1.17e-10;3!CL:0000842;1.17e-10;3!CL:0002087;1.49e-07;104!CL:0000094;3.28e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.53e-36,11;CL:0000084,1.01e-27,25;CL:0000827,1.01e-27,25;CL:0000791,1.36e-25,18;CL:0000789,1.36e-25,18;CL:0002420,1.36e-25,18;CL:0002419,1.36e-25,18;CL:0000790,1.36e-25,18;CL:0000738,1.03e-23,136;CL:0000838,2.37e-19,52;CL:0000542,6.79e-19,53;CL:0000051,6.79e-19,53;CL:0000037,1.68e-17,168;CL:0002087,2.52e-17,115;CL:0000988,3.68e-16,177;CL:0002031,8.96e-14,120;CL:0002032,1.46e-12,161;CL:0000837,1.46e-12,161;CL:0000784,4.63e-12,3;CL:0000623,6.62e-12,3;CL:0000825,6.62e-12,3;CL:0000767,1.71e-11,3;CL:0000226,1.11e-10,3;CL:0000842,1.11e-10,3;CL:0000094,3.25e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;1.31e-25;18!CL:0000051;6.48e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.19e-19!102;UBERON:0003061!3.19e-19!102;UBERON:0002193!2.90e-17!112;UBERON:0000178!5.30e-14!15;UBERON:0000179!5.30e-14!15;UBERON:0000463!5.30e-14!15;UBERON:0007023!5.49e-12!115;UBERON:0001474!3.59e-08!86;UBERON:0002405!3.77e-08!115;UBERON:0002371!4.63e-08!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.99e-30;15!UBERON:0000179;8.99e-30;15!UBERON:0000463;8.99e-30;15!UBERON:0002390;6.58e-14;32!UBERON:0002193;2.01e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.00e-30,15;UBERON:0000179,9.00e-30,15;UBERON:0000463,9.00e-30,15;UBERON:0002390,7.96e-11,98;UBERON:0003061,7.96e-11,98;UBERON:0002193,2.27e-10,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.9952208877831,36.079963421138,13.6238188518147,0,0,0,0,0,0,9.41792194504192,7.62068900386538,11.2845652772243,0.223915474239924,1.6194683300949,0.515151135268373,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0,0,0.376484679085209,0.545812300115692,0.224723484445085,0.918251677112708,0.320929027076094,0,0.329851300186716,0.598390972864896,0,0,1.13477044938228,1.86846674698672,0.75374599577023,0.521482918420201,0.65156653411535,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,1.14681968437569,0,9.52864557068611,0.263384084775077,0,0,0,0,0,0,0,6.90744832688076,0,0,0,6.02029202710673,8.19373889627233,2.46656856905514,1.10540007114339,0,0,0.267540828089713,1.04535523804977,2.60611488204402,0,0.34362744548263,0.253019692019503,11.1497895013434,5.85975108470777,9.50452044448374,30.1150238155546,31.2287331216781,13.742379920758,17.7582939033013,32.0239918799208,15.5237192283044,14.7092107680929,9.41358625238193,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0.324547393654683,0,0,78.9403966450682,171.026478323258,100.664982860312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,0,0,0,0,0,1.06400514659507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0.16798212819886,0,0,0,0,111.341891764483,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.693796862343,54.9715820963377,48.9474594931104,53.9040752374943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40980880980951,7.98142543028882,11.2063935693617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0,8.62660935694688,9.1756464857085,7.40541343326411,11.4351252219739,7.4045209155515,5.83625980073446,9.72056587028607,8.72437693923697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0.111443384277478,14.7750796339335,0,0.296964680832639,0,0,0,0,39.5529298144223,0,0.398495976502139,0,0,0,0,0,0,0,0,0.197286811273867,31.1328020051022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0.227884111694002,0,0,0,0.31900115973192,0.0915975934018623,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,1.49502377594773,0.78602152549833,0.828478110694391,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,3.19979833367888,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0.460935950223117,0.171488009437418,0,0,0,0,0.235479278551542,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,1.69171052363736,0.966868319603658,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.387533459016037,0.186224142887574,0,0.190941474834495,0.202117188958219,0.435433495793923,0,1.01028079521881,0.430333232356058,0,0,0,0,0,0,0.366724332548599,0,0,0.805095174364105,0 | |||
|short_description=p3@GZMB | |||
}} |
Latest revision as of 15:25, 19 September 2015
Short description: | p3@GZMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GZMB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000216341, ENST00000382540, ENST00000382542_5end |
EntrezGene: | GZMB |
HGNC: | 4709 |
UniProt: | P10144E7EUV0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.53e-36 | 11 |
T cell | 1.01e-27 | 25 |
pro-T cell | 1.01e-27 | 25 |
mature alpha-beta T cell | 1.36e-25 | 18 |
alpha-beta T cell | 1.36e-25 | 18 |
immature T cell | 1.36e-25 | 18 |
mature T cell | 1.36e-25 | 18 |
immature alpha-beta T cell | 1.36e-25 | 18 |
leukocyte | 1.03e-23 | 136 |
lymphoid lineage restricted progenitor cell | 2.37e-19 | 52 |
lymphocyte | 6.79e-19 | 53 |
common lymphoid progenitor | 6.79e-19 | 53 |
hematopoietic stem cell | 1.68e-17 | 168 |
nongranular leukocyte | 2.52e-17 | 115 |
hematopoietic cell | 3.68e-16 | 177 |
hematopoietic lineage restricted progenitor cell | 8.96e-14 | 120 |
hematopoietic oligopotent progenitor cell | 1.46e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.46e-12 | 161 |
plasmacytoid dendritic cell | 4.63e-12 | 3 |
natural killer cell | 6.62e-12 | 3 |
pro-NK cell | 6.62e-12 | 3 |
basophil | 1.71e-11 | 3 |
single nucleate cell | 1.11e-10 | 3 |
mononuclear cell | 1.11e-10 | 3 |
granulocyte | 3.25e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 9.00e-30 | 15 |
haemolymphatic fluid | 9.00e-30 | 15 |
organism substance | 9.00e-30 | 15 |
hematopoietic system | 7.96e-11 | 98 |
blood island | 7.96e-11 | 98 |
hemolymphoid system | 2.27e-10 | 108 |