FFCP PHASE1:Hg19::chr1:199996831..199996843,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2494 | |EntrezGene=2494 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7984 | |HGNC=7984 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQH2 | |UniProt=E9PQH2 | ||
|association_with_transcript=46bp_to_ENST00000474307_5end | |association_with_transcript=46bp_to_ENST00000474307_5end | ||
|cluster_id=chr1:199996831..199996843,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_4_at_NR5A2_5end | |description=CAGE_peak_4_at_NR5A2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!1.11e-14!12;CL:0000417!1.11e-14!12;CL:0000668!1.11e-14!12;CL:0000414!1.11e-14!12;CL:0000412!1.11e-14!12;CL:0000182!1.11e-14!12;CL:0000223!2.54e-10!59;CL:0002563!4.38e-08!4 | |ontology_enrichment_celltype=CL:0000181!1.11e-14!12;CL:0000417!1.11e-14!12;CL:0000668!1.11e-14!12;CL:0000414!1.11e-14!12;CL:0000412!1.11e-14!12;CL:0000182!1.11e-14!12;CL:0000223!2.54e-10!59;CL:0002563!4.38e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.11e-08;12 | |ontology_enrichment_celltype_v019=CL:0000182;5.11e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.04e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.45e-11;1 | |ontology_enrichment_development_v019=UBERON:0001045;3.45e-11;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@NR5A2 | |short_description=p4@NR5A2 | ||
}} | }} |
Latest revision as of 15:45, 19 September 2015
Short description: | p4@NR5A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NR5A2_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 46bp_to_ENST00000474307_5end |
EntrezGene: | NR5A2 |
HGNC: | 7984 |
UniProt: | E9PQH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.04e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.67e-44 | 17 |
gastrointestinal system | 3.53e-30 | 25 |
large intestine | 9.74e-23 | 11 |
small intestine | 5.62e-19 | 4 |
colon | 2.63e-18 | 9 |
subdivision of digestive tract | 1.26e-16 | 118 |
digestive tract diverticulum | 4.38e-15 | 23 |
sac | 2.66e-13 | 26 |
digestive system | 4.01e-13 | 145 |
digestive tract | 4.01e-13 | 145 |
primitive gut | 4.01e-13 | 145 |
liver | 5.76e-13 | 19 |
digestive gland | 5.76e-13 | 19 |
liver bud | 5.76e-13 | 19 |
endoderm-derived structure | 1.11e-11 | 160 |
endoderm | 1.11e-11 | 160 |
presumptive endoderm | 1.11e-11 | 160 |
hepatic diverticulum | 3.48e-11 | 22 |
liver primordium | 3.48e-11 | 22 |
vermiform appendix | 4.01e-11 | 1 |
caecum | 4.01e-11 | 1 |
midgut | 4.01e-11 | 1 |
epithelial sac | 7.89e-10 | 25 |
epithelium of foregut-midgut junction | 7.89e-10 | 25 |
anatomical boundary | 7.89e-10 | 25 |
hepatobiliary system | 7.89e-10 | 25 |
foregut-midgut junction | 7.89e-10 | 25 |
septum transversum | 7.89e-10 | 25 |
organ system subdivision | 7.33e-09 | 223 |
lower digestive tract | 1.04e-08 | 5 |
gut epithelium | 2.51e-08 | 54 |
exocrine gland | 6.70e-08 | 31 |
exocrine system | 6.70e-08 | 31 |
endocrine system | 1.47e-07 | 45 |
endocrine gland | 5.59e-07 | 35 |