FFCP PHASE1:Hg19::chr3:113465032..113465051,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80218 | |EntrezGene=80218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29533 | |HGNC=29533 | ||
|TSSclassifier=strong | |||
|UniProt=F8WB80 | |UniProt=F8WB80 | ||
|association_with_transcript=0bp_to_ENST00000313396_5end | |association_with_transcript=0bp_to_ENST00000313396_5end | ||
|cluster_id=chr3:113465032..113465051,- | |||
|description=CAGE_peak_2_at_NAA50_5end | |description=CAGE_peak_2_at_NAA50_5end | ||
|id=chr3:113465032..113465051,- | |id=chr3:113465032..113465051,- | ||
|ontology_enrichment_celltype=CL:0000012!3.70e-25!682;CL:0000548!3.90e-24!679;CL:0000004!3.90e-24!679;CL:0000255!3.90e-24!679;CL:0000063!4.25e-22!578;CL:0000003!5.45e-13!722;CL:0000144!1.69e-11!625;CL:0000219!2.94e-11!390;CL:0002032!5.15e-11!165;CL:0000837!5.15e-11!165;CL:0000037!5.99e-11!172;CL:0000566!5.99e-11!172;CL:0000763!6.56e-10!112;CL:0000049!6.56e-10!112;CL:0000988!1.15e-09!182;CL:0000134!1.22e-09!358;CL:0000034!7.67e-09!444;CL:0002320!2.32e-08!365;CL:0000723!2.46e-07!436;CL:0000860!3.05e-07!45;CL:0000048!7.93e-07!430;CL:0002371!8.13e-07!591 | |ontology_enrichment_celltype=CL:0000012!3.70e-25!682;CL:0000548!3.90e-24!679;CL:0000004!3.90e-24!679;CL:0000255!3.90e-24!679;CL:0000063!4.25e-22!578;CL:0000003!5.45e-13!722;CL:0000144!1.69e-11!625;CL:0000219!2.94e-11!390;CL:0002032!5.15e-11!165;CL:0000837!5.15e-11!165;CL:0000037!5.99e-11!172;CL:0000566!5.99e-11!172;CL:0000763!6.56e-10!112;CL:0000049!6.56e-10!112;CL:0000988!1.15e-09!182;CL:0000134!1.22e-09!358;CL:0000034!7.67e-09!444;CL:0002320!2.32e-08!365;CL:0000723!2.46e-07!436;CL:0000860!3.05e-07!45;CL:0000048!7.93e-07!430;CL:0002371!8.13e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.21e-10;33!CL:0002057;5.21e-10;33!CL:0000473;1.53e-07;39!CL:0000234;1.53e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,1.58e-10,386;CL:0002032,4.98e-10,161;CL:0000837,4.98e-10,161;CL:0000037,5.63e-10,168;CL:0000988,5.64e-09,177;CL:0000134,5.65e-09,354;CL:0000763,6.98e-09,108;CL:0000049,6.98e-09,108;CL:0000034,2.49e-08,441;CL:0002320,9.53e-08,361;CL:0000723,7.02e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.87e-28!239;DOID:162!3.64e-28!235;DOID:305!9.92e-16!106;DOID:0050687!1.55e-14!143;DOID:0050686!4.30e-13!137;DOID:2531!4.38e-10!51;DOID:0060083!4.38e-10!51;DOID:1240!4.72e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;8.83e-07;51!DOID:0060083;8.83e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.87e-28,239;DOID:162,3.64e-28,235;DOID:305,9.92e-16,106;DOID:0050687,1.55e-14,143;DOID:0050686,4.30e-13,137;DOID:2531,4.38e-10,51;DOID:0060083,4.38e-10,51;DOID:1240,4.72e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0002384!6.86e-09!375 | |ontology_enrichment_uberon=UBERON:0002384!6.86e-09!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.97e-08,371 | |||
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|short_description=p2@NAA50 | |short_description=p2@NAA50 | ||
}} | }} |
Latest revision as of 16:00, 19 September 2015
Short description: | p2@NAA50 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NAA50_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000313396_5end |
EntrezGene: | NAA50 |
HGNC: | 29533 |
UniProt: | F8WB80 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 1.58e-10 | 386 |
hematopoietic oligopotent progenitor cell | 4.98e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.98e-10 | 161 |
hematopoietic stem cell | 5.63e-10 | 168 |
hematopoietic cell | 5.64e-09 | 177 |
mesenchymal cell | 5.65e-09 | 354 |
myeloid cell | 6.98e-09 | 108 |
common myeloid progenitor | 6.98e-09 | 108 |
stem cell | 2.49e-08 | 441 |
connective tissue cell | 9.53e-08 | 361 |
somatic stem cell | 7.02e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.97e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.87e-28 | 239 |
cancer | 3.64e-28 | 235 |
carcinoma | 9.92e-16 | 106 |
cell type cancer | 1.55e-14 | 143 |
organ system cancer | 4.30e-13 | 137 |
hematologic cancer | 4.38e-10 | 51 |
immune system cancer | 4.38e-10 | 51 |
leukemia | 4.72e-08 | 39 |