FFCP PHASE1:Hg19::chr1:8938736..8938756,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2023 | |EntrezGene=2023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3350 | |HGNC=3350 | ||
|TSSclassifier=strong | |||
|UniProt=P06733 | |UniProt=P06733 | ||
|association_with_transcript=0bp_to_ENST00000234590,ENST00000486051_5end | |association_with_transcript=0bp_to_ENST00000234590,ENST00000486051_5end | ||
|cluster_id=chr1:8938736..8938756,- | |||
|coexpression_cluster_id=C4004 | |||
|description=CAGE_peak_1_at_ENO1_5end | |description=CAGE_peak_1_at_ENO1_5end | ||
|id=chr1:8938736..8938756,- | |id=chr1:8938736..8938756,- | ||
|ontology_enrichment_celltype=CL:0000548!3.27e-44!679;CL:0000004!3.27e-44!679;CL:0000255!3.27e-44!679;CL:0000012!4.76e-44!682;CL:0000003!8.17e-32!722;CL:0000144!5.92e-30!625;CL:0002371!1.44e-27!591;CL:0000055!6.76e-21!180;CL:0000063!1.57e-20!578;CL:0000066!2.97e-17!254;CL:0002321!1.49e-16!248;CL:0000220!2.07e-16!246;CL:0000222!1.27e-13!119;CL:0000183!1.53e-09!59;CL:0000680!3.74e-09!57;CL:0000056!3.74e-09!57;CL:0000355!3.74e-09!57;CL:0000192!6.70e-09!42;CL:0000514!6.70e-09!42;CL:0000359!1.05e-08!32;CL:0000057!1.09e-08!75;CL:0000187!1.70e-08!54;CL:0000393!1.02e-07!60;CL:0000211!1.02e-07!60;CL:1000497!5.76e-07!18;CL:0002518!5.76e-07!18 | |ontology_enrichment_celltype=CL:0000548!3.27e-44!679;CL:0000004!3.27e-44!679;CL:0000255!3.27e-44!679;CL:0000012!4.76e-44!682;CL:0000003!8.17e-32!722;CL:0000144!5.92e-30!625;CL:0002371!1.44e-27!591;CL:0000055!6.76e-21!180;CL:0000063!1.57e-20!578;CL:0000066!2.97e-17!254;CL:0002321!1.49e-16!248;CL:0000220!2.07e-16!246;CL:0000222!1.27e-13!119;CL:0000183!1.53e-09!59;CL:0000680!3.74e-09!57;CL:0000056!3.74e-09!57;CL:0000355!3.74e-09!57;CL:0000192!6.70e-09!42;CL:0000514!6.70e-09!42;CL:0000359!1.05e-08!32;CL:0000057!1.09e-08!75;CL:0000187!1.70e-08!54;CL:0000393!1.02e-07!60;CL:0000211!1.02e-07!60;CL:1000497!5.76e-07!18;CL:0002518!5.76e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.99e-08;32!CL:1000497;1.52e-07;17!CL:0002518;1.52e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.01e-17,253;CL:0002321,1.13e-16,250;CL:0000222,1.11e-13,121;CL:0000680,7.27e-09,58;CL:0000056,7.27e-09,58;CL:0000355,7.27e-09,58;CL:0000359,1.05e-08,32;CL:0000192,1.50e-08,43;CL:0000514,1.50e-08,43;CL:0000057,1.61e-08,76;CL:0000187,3.25e-08,55;CL:1000497,1.52e-07,17;CL:0002518,1.52e-07,17;CL:0000393,1.78e-07,61;CL:0000211,1.78e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.22e-12!118;UBERON:0001637!1.95e-11!42;UBERON:0003509!1.95e-11!42;UBERON:0004572!1.95e-11!42;UBERON:0002049!1.73e-10!79;UBERON:0007798!1.73e-10!79;UBERON:0000490!1.06e-09!138;UBERON:0001981!1.26e-09!60;UBERON:0007500!1.26e-09!60;UBERON:0004537!1.26e-09!60;UBERON:0006965!1.26e-09!60;UBERON:0000055!1.61e-09!69;UBERON:0005256!2.46e-09!143;UBERON:0002100!2.61e-09!216;UBERON:0000486!2.86e-09!82;UBERON:0004290!1.69e-08!70;UBERON:0004872!2.31e-08!84;UBERON:0003104!3.14e-08!238;UBERON:0009142!3.14e-08!238;UBERON:0000914!4.54e-08!83;UBERON:0002329!4.54e-08!83;UBERON:0003077!4.54e-08!83;UBERON:0003059!4.54e-08!83;UBERON:0007282!4.54e-08!83;UBERON:0009618!4.54e-08!83;UBERON:0007285!4.54e-08!83;UBERON:0004573!7.26e-08!33;UBERON:0004571!7.26e-08!33;UBERON:0001134!7.95e-07!61;UBERON:0002036!7.95e-07!61;UBERON:0003082!7.95e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.27e-08;42!UBERON:0003509;2.27e-08;42!UBERON:0004572;2.27e-08;42!UBERON:0007500;7.33e-08;56!UBERON:0001981;7.33e-08;56!UBERON:0004537;7.33e-08;56!UBERON:0003914;9.00e-08;74!UBERON:0004573;4.62e-07;33!UBERON:0004571;4.62e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.14e-12,117;UBERON:0001637,1.95e-11,42;UBERON:0003509,1.95e-11,42;UBERON:0004572,1.95e-11,42;UBERON:0000490,3.72e-11,148;UBERON:0002049,1.10e-10,78;UBERON:0007798,1.10e-10,78;UBERON:0002100,5.16e-10,199;UBERON:0007503,6.74e-10,78;UBERON:0007500,7.49e-10,59;UBERON:0001981,7.49e-10,59;UBERON:0004537,7.49e-10,59;UBERON:0006965,7.49e-10,59;UBERON:0000055,1.02e-09,68;UBERON:0000486,4.82e-09,83;UBERON:0004872,1.63e-08,83;UBERON:0002329,2.90e-08,71;UBERON:0003059,2.90e-08,71;UBERON:0007282,2.90e-08,71;UBERON:0004290,2.90e-08,71;UBERON:0009618,2.90e-08,71;UBERON:0003077,6.86e-08,72;UBERON:0007285,6.86e-08,72;UBERON:0004573,7.26e-08,33;UBERON:0004571,7.26e-08,33;UBERON:0007524,1.03e-07,73;UBERON:0003104,1.20e-07,160;UBERON:0009142,1.20e-07,160;UBERON:0005256,3.06e-07,122 | |||
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| ||
|short_description=p1@ENO1 | |short_description=p1@ENO1 | ||
}} | }} |
Latest revision as of 16:07, 19 September 2015
Short description: | p1@ENO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENO1_5end |
Coexpression cluster: | C4004_Alveolar_Smooth_Renal_Tracheal_Keratinocyte_Bronchial_Esophageal |
Association with transcript: | 0bp_to_ENST00000234590, ENST00000486051_5end |
EntrezGene: | ENO1 |
HGNC: | 3350 |
UniProt: | P06733 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.01e-17 | 253 |
embryonic cell | 1.13e-16 | 250 |
mesodermal cell | 1.11e-13 | 121 |
muscle precursor cell | 7.27e-09 | 58 |
myoblast | 7.27e-09 | 58 |
multi-potent skeletal muscle stem cell | 7.27e-09 | 58 |
vascular associated smooth muscle cell | 1.05e-08 | 32 |
smooth muscle cell | 1.50e-08 | 43 |
smooth muscle myoblast | 1.50e-08 | 43 |
fibroblast | 1.61e-08 | 76 |
muscle cell | 3.25e-08 | 55 |
kidney cell | 1.52e-07 | 17 |
kidney epithelial cell | 1.52e-07 | 17 |
electrically responsive cell | 1.78e-07 | 61 |
electrically active cell | 1.78e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 3.14e-12 | 117 |
artery | 1.95e-11 | 42 |
arterial blood vessel | 1.95e-11 | 42 |
arterial system | 1.95e-11 | 42 |
unilaminar epithelium | 3.72e-11 | 148 |
vasculature | 1.10e-10 | 78 |
vascular system | 1.10e-10 | 78 |
trunk | 5.16e-10 | 199 |
epithelial vesicle | 6.74e-10 | 78 |
epithelial tube open at both ends | 7.49e-10 | 59 |
blood vessel | 7.49e-10 | 59 |
blood vasculature | 7.49e-10 | 59 |
vascular cord | 7.49e-10 | 59 |
vessel | 1.02e-09 | 68 |
multilaminar epithelium | 4.82e-09 | 83 |
splanchnic layer of lateral plate mesoderm | 1.63e-08 | 83 |
somite | 2.90e-08 | 71 |
presomitic mesoderm | 2.90e-08 | 71 |
presumptive segmental plate | 2.90e-08 | 71 |
dermomyotome | 2.90e-08 | 71 |
trunk paraxial mesoderm | 2.90e-08 | 71 |
paraxial mesoderm | 6.86e-08 | 72 |
presumptive paraxial mesoderm | 6.86e-08 | 72 |
systemic artery | 7.26e-08 | 33 |
systemic arterial system | 7.26e-08 | 33 |
dense mesenchyme tissue | 1.03e-07 | 73 |
mesenchyme | 1.20e-07 | 160 |
entire embryonic mesenchyme | 1.20e-07 | 160 |
trunk mesenchyme | 3.06e-07 | 122 |