FFCP PHASE1:Hg19::chr11:66824303..66824343,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29984 | |EntrezGene=29984 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=670 | |HGNC=670 | ||
|TSSclassifier=strong | |||
|UniProt=E9PMC8 | |UniProt=E9PMC8 | ||
|association_with_transcript=0bp_to_ENST00000533360_5end | |association_with_transcript=0bp_to_ENST00000533360_5end | ||
|cluster_id=chr11:66824303..66824343,+ | |||
|coexpression_cluster_id=C511 | |coexpression_cluster_id=C511 | ||
|description=CAGE_peak_1_at_RHOD_5end | |description=CAGE_peak_1_at_RHOD_5end | ||
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|ontology_enrichment_celltype=CL:0000066!1.12e-38!254;CL:0000220!1.86e-17!246;CL:0002321!2.90e-17!248;CL:0002076!1.02e-14!43;CL:0000223!4.86e-14!59;CL:0002251!4.33e-08!21;CL:0000076!4.45e-08!62;CL:0002368!6.76e-07!13;CL:0000548!7.64e-07!679;CL:0000004!7.64e-07!679;CL:0000255!7.64e-07!679 | |ontology_enrichment_celltype=CL:0000066!1.12e-38!254;CL:0000220!1.86e-17!246;CL:0002321!2.90e-17!248;CL:0002076!1.02e-14!43;CL:0000223!4.86e-14!59;CL:0002251!4.33e-08!21;CL:0000076!4.45e-08!62;CL:0002368!6.76e-07!13;CL:0000548!7.64e-07!679;CL:0000004!7.64e-07!679;CL:0000255!7.64e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.80e-11;42!CL:0002251;4.29e-08;20!CL:0000349;1.89e-07;19!CL:0002368;3.85e-07;13 | |ontology_enrichment_celltype_v019=CL:0002076;2.80e-11;42!CL:0002251;4.29e-08;20!CL:0000349;1.89e-07;19!CL:0002368;3.85e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.55e-40,253;CL:0002321,3.26e-18,250;CL:0002076,4.71e-15,42;CL:0000223,3.94e-14,58;CL:0000076,8.64e-09,63;CL:0002251,4.47e-08,20;CL:0000349,1.68e-07,19;CL:0002368,3.81e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000223;2.52e-08;58 | |ontology_enrichment_development_v019=CL:0000223;2.52e-08;58 | ||
|ontology_enrichment_disease=DOID:305!6.63e-10!106 | |ontology_enrichment_disease=DOID:305!6.63e-10!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.99e-10,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.71e-19!169;UBERON:0000925!2.71e-19!169;UBERON:0006595!2.71e-19!169;UBERON:0003104!1.61e-18!238;UBERON:0009142!1.61e-18!238;UBERON:0000481!1.12e-17!347;UBERON:0000468!4.53e-16!659;UBERON:0002100!7.46e-16!216;UBERON:0001007!2.93e-14!155;UBERON:0001555!2.93e-14!155;UBERON:0007026!2.93e-14!155;UBERON:0000475!2.77e-13!365;UBERON:0000077!4.09e-13!130;UBERON:0005256!1.12e-12!143;UBERON:0001048!3.30e-12!168;UBERON:0000064!5.52e-12!219;UBERON:0000483!1.21e-11!309;UBERON:0000466!1.60e-11!126;UBERON:0000119!1.96e-11!312;UBERON:0009569!2.05e-11!113;UBERON:0001004!2.26e-11!72;UBERON:0000477!3.31e-11!286;UBERON:0004921!7.54e-11!129;UBERON:0004185!7.54e-11!129;UBERON:0000467!9.30e-11!625;UBERON:0000480!1.66e-10!626;UBERON:0000922!1.49e-09!612;UBERON:0002050!1.72e-09!605;UBERON:0005423!1.72e-09!605;UBERON:0001041!1.96e-09!98;UBERON:0000464!2.40e-09!104;UBERON:0000923!2.56e-09!604;UBERON:0005291!2.56e-09!604;UBERON:0006598!2.56e-09!604;UBERON:0002532!2.56e-09!604;UBERON:0004923!1.14e-08!57;UBERON:0000490!1.17e-08!138;UBERON:0003914!1.42e-08!118;UBERON:0001444!1.70e-08!48;UBERON:0000915!2.76e-08!52;UBERON:0000065!4.43e-08!53;UBERON:0000161!4.62e-08!35;UBERON:0000063!6.54e-08!97;UBERON:0004111!7.77e-08!241;UBERON:0005631!9.06e-08!14;UBERON:0000158!9.06e-08!14;UBERON:0005911!1.20e-07!82;UBERON:0000062!1.28e-07!511;UBERON:0000926!3.03e-07!448;UBERON:0004120!3.03e-07!448;UBERON:0006603!3.03e-07!448;UBERON:0003102!3.50e-07!95;UBERON:0003064!3.70e-07!37;UBERON:0000072!4.35e-07!46;UBERON:0002530!7.92e-07!59;UBERON:0000166!7.95e-07!21 | |ontology_enrichment_uberon=UBERON:0004119!2.71e-19!169;UBERON:0000925!2.71e-19!169;UBERON:0006595!2.71e-19!169;UBERON:0003104!1.61e-18!238;UBERON:0009142!1.61e-18!238;UBERON:0000481!1.12e-17!347;UBERON:0000468!4.53e-16!659;UBERON:0002100!7.46e-16!216;UBERON:0001007!2.93e-14!155;UBERON:0001555!2.93e-14!155;UBERON:0007026!2.93e-14!155;UBERON:0000475!2.77e-13!365;UBERON:0000077!4.09e-13!130;UBERON:0005256!1.12e-12!143;UBERON:0001048!3.30e-12!168;UBERON:0000064!5.52e-12!219;UBERON:0000483!1.21e-11!309;UBERON:0000466!1.60e-11!126;UBERON:0000119!1.96e-11!312;UBERON:0009569!2.05e-11!113;UBERON:0001004!2.26e-11!72;UBERON:0000477!3.31e-11!286;UBERON:0004921!7.54e-11!129;UBERON:0004185!7.54e-11!129;UBERON:0000467!9.30e-11!625;UBERON:0000480!1.66e-10!626;UBERON:0000922!1.49e-09!612;UBERON:0002050!1.72e-09!605;UBERON:0005423!1.72e-09!605;UBERON:0001041!1.96e-09!98;UBERON:0000464!2.40e-09!104;UBERON:0000923!2.56e-09!604;UBERON:0005291!2.56e-09!604;UBERON:0006598!2.56e-09!604;UBERON:0002532!2.56e-09!604;UBERON:0004923!1.14e-08!57;UBERON:0000490!1.17e-08!138;UBERON:0003914!1.42e-08!118;UBERON:0001444!1.70e-08!48;UBERON:0000915!2.76e-08!52;UBERON:0000065!4.43e-08!53;UBERON:0000161!4.62e-08!35;UBERON:0000063!6.54e-08!97;UBERON:0004111!7.77e-08!241;UBERON:0005631!9.06e-08!14;UBERON:0000158!9.06e-08!14;UBERON:0005911!1.20e-07!82;UBERON:0000062!1.28e-07!511;UBERON:0000926!3.03e-07!448;UBERON:0004120!3.03e-07!448;UBERON:0006603!3.03e-07!448;UBERON:0003102!3.50e-07!95;UBERON:0003064!3.70e-07!37;UBERON:0000072!4.35e-07!46;UBERON:0002530!7.92e-07!59;UBERON:0000166!7.95e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;7.32e-07;28 | |ontology_enrichment_uberon_v019=UBERON:0000165;7.32e-07;28 | ||
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| ||
|short_description=p1@RHOD | |short_description=p1@RHOD | ||
}} | }} |
Latest revision as of 16:40, 19 September 2015
Short description: | p1@RHOD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RHOD_5end |
Coexpression cluster: | C511_Placental_Alveolar_Bronchial_amniotic_Gingival_Corneal_Mammary |
Association with transcript: | 0bp_to_ENST00000533360_5end |
EntrezGene: | RHOD |
HGNC: | 670 |
UniProt: | E9PMC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.55e-40 | 253 |
embryonic cell | 3.26e-18 | 250 |
endo-epithelial cell | 4.71e-15 | 42 |
endodermal cell | 3.94e-14 | 58 |
squamous epithelial cell | 8.64e-09 | 63 |
epithelial cell of alimentary canal | 4.47e-08 | 20 |
extraembryonic cell | 1.68e-07 | 19 |
respiratory epithelial cell | 3.81e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.99e-10 | 106 |