FFCP PHASE1:Hg19::chr1:200860649..200860697,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55765 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25599 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=10bp_to_uc001gvo.2_5end | |||
|cluster_id=chr1:200860649..200860697,+ | |||
|description=CAGE_peak_2_at_C1orf106_5end | |||
|id=chr1:200860649..200860697,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.16e-18!254;CL:0000223!5.80e-11!59;CL:0002076!2.25e-09!43;CL:1000497!3.18e-08!18;CL:0002518!3.18e-08!18;CL:1000449!3.08e-07!16;CL:0000039!9.48e-07!7;CL:0000586!9.48e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:1000497;3.46e-14;17!CL:0002518;3.46e-14;17!CL:1000507;4.33e-13;10!CL:1000494;4.33e-13;10!CL:1000449;1.37e-12;15!CL:0000039;1.09e-09;7!CL:0000586;1.09e-09;7!CL:0002681;5.22e-09;12!CL:0002584;5.22e-09;12!CL:0002076;6.12e-09;42!CL:0002322;2.01e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.08e-24,253;CL:1000497,2.33e-14,17;CL:0002518,2.33e-14,17;CL:0000223,3.64e-14,58;CL:1000507,4.13e-13,10;CL:1000494,4.13e-13,10;CL:1000449,8.87e-13,15;CL:0002076,5.20e-12,42;CL:0000039,9.34e-10,7;CL:0000586,9.34e-10,7;CL:0002681,3.51e-09,12;CL:0002584,3.51e-09,12;CL:0002322,1.89e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.43e-07;10!UBERON:0007687;1.43e-07;10!UBERON:0003104;1.66e-07;31!CL:0000223;5.25e-07;58 | |||
|ontology_enrichment_disease=DOID:305!3.22e-17!106;DOID:0050687!1.80e-13!143;DOID:299!1.45e-09!25;DOID:162!4.78e-08!235;DOID:14566!3.16e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:299;2.57e-09;25!DOID:305;2.28e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.34e-22,106;DOID:0050687,1.14e-16,143;DOID:162,5.59e-11,235;DOID:14566,2.63e-10,239;DOID:299,1.87e-09,25;DOID:7,7.88e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.35e-14!169;UBERON:0000925!1.35e-14!169;UBERON:0006595!1.35e-14!169;UBERON:0001007!5.76e-13!155;UBERON:0001555!5.76e-13!155;UBERON:0007026!5.76e-13!155;UBERON:0000064!2.85e-12!219;UBERON:0004921!5.69e-12!129;UBERON:0004185!5.69e-12!129;UBERON:0000062!1.18e-11!511;UBERON:0005177!2.21e-11!107;UBERON:0000481!4.44e-11!347;UBERON:0000489!6.81e-11!32;UBERON:0000466!8.40e-11!126;UBERON:0006554!2.10e-10!44;UBERON:0002113!5.23e-10!27;UBERON:0003918!5.23e-10!27;UBERON:0005095!5.23e-10!27;UBERON:0007687!5.23e-10!27;UBERON:0000077!6.28e-10!130;UBERON:0001008!7.20e-10!45;UBERON:0000922!1.48e-09!612;UBERON:0000464!2.80e-09!104;UBERON:0005743!3.59e-09!86;UBERON:0005172!7.90e-09!55;UBERON:0005173!7.90e-09!55;UBERON:0001017!1.88e-08!82;UBERON:0002417!2.02e-08!61;UBERON:0000916!2.02e-08!61;UBERON:0003886!3.78e-08!63;UBERON:0000475!5.21e-08!365;UBERON:0001048!5.53e-08!168;UBERON:0000073!6.21e-08!94;UBERON:0001016!6.21e-08!94;UBERON:0002050!6.75e-08!605;UBERON:0005423!6.75e-08!605;UBERON:0004121!8.00e-08!169;UBERON:0002553!9.90e-08!70;UBERON:0000923!1.01e-07!604;UBERON:0005291!1.01e-07!604;UBERON:0006598!1.01e-07!604;UBERON:0002532!1.01e-07!604;UBERON:0009569!1.21e-07!113;UBERON:0005911!1.45e-07!82;UBERON:0000924!1.58e-07!173;UBERON:0006601!1.58e-07!173;UBERON:0001041!2.65e-07!98;UBERON:0004211!3.08e-07!16;UBERON:0001285!3.08e-07!16;UBERON:0007684!3.08e-07!16;UBERON:0003220!3.08e-07!16;UBERON:0004208!3.08e-07!16;UBERON:0000160!3.92e-07!27;UBERON:0005409!4.93e-07!35;UBERON:0000063!5.66e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.10e-19;24!UBERON:0011143;1.10e-19;24!UBERON:0000489;1.43e-18;29!UBERON:0006554;4.50e-16;30!UBERON:0001008;4.50e-16;30!UBERON:0004211;4.33e-13;10!UBERON:0009773;4.33e-13;10!UBERON:0001231;4.33e-13;10!UBERON:0004810;4.33e-13;10!UBERON:0006555;1.37e-12;15!UBERON:0004819;1.37e-12;15!UBERON:0001285;1.37e-12;15!UBERON:0007684;1.37e-12;15!UBERON:0005172;2.02e-10;52!UBERON:0005173;2.02e-10;52!UBERON:0001225;5.22e-09;12!UBERON:0008987;5.22e-09;12!UBERON:0000353;4.76e-08;15!UBERON:0002417;5.30e-08;58!UBERON:0000916;5.30e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.11e-17,26;UBERON:0003918,1.11e-17,26;UBERON:0011143,1.11e-17,26;UBERON:0005095,1.11e-17,26;UBERON:0007687,1.11e-17,26;UBERON:0000489,6.43e-17,31;UBERON:0005177,2.62e-16,101;UBERON:0005172,2.92e-15,54;UBERON:0005173,2.92e-15,54;UBERON:0004810,4.13e-13,10;UBERON:0004211,8.87e-13,15;UBERON:0009773,8.87e-13,15;UBERON:0001231,8.87e-13,15;UBERON:0001285,8.87e-13,15;UBERON:0007684,8.87e-13,15;UBERON:0004208,8.87e-13,15;UBERON:0006554,9.20e-13,47;UBERON:0002417,1.15e-12,60;UBERON:0000916,1.15e-12,60;UBERON:0001008,2.61e-12,48;UBERON:0006555,1.04e-11,16;UBERON:0004819,1.04e-11,16;UBERON:0009569,5.18e-10,112;UBERON:0001225,3.51e-09,12;UBERON:0008987,3.51e-09,12;UBERON:0004119,1.01e-08,160;UBERON:0000925,1.01e-08,160;UBERON:0006595,1.01e-08,160;UBERON:0001007,1.52e-08,145;UBERON:0001555,1.52e-08,145;UBERON:0007026,1.52e-08,145;UBERON:0004921,1.77e-08,118;UBERON:0000353,3.30e-08,15;UBERON:0001851,8.72e-07,15 | |||
|phase1_expression=0.363356758541113,0,0.704772020479856,0,0,0.872338524100369,0,0,0,2.94880723801811,8.37361401566913,2.62129646556207,3.16520373874144,0,0,0,0,0,0,3.20114750999649,0.816002764977012,0.940364164434263,4.29353980696585,3.55873505189499,3.26410862946487,5.34893840235659,6.65014774544561,4.5652253161934,0,0,0.309632246632152,3.67768489791571,4.819294700452,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0.486634870302636,2.07976597760949,0.221729397462564,1.05401742831751,0.589405839739707,0.728590576585084,1.85392221392215,2.27183175558278,0.870648686496336,1.86141144726411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0.354668382198357,0,1.06748995729705,0.24666754841716,0.311211035399766,0,0,0.151357427644931,1.72852777344,0.234321431833797,0,0,0,0,0,0.280901613404497,0,1.35117749042945,0,0,0,0,0,0.505008341862199,0.375355559615893,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,0.545492241181669,0.860413786167011,8.66013313520127,7.95178609928912,6.39066685782351,8.50020651126038,12.6160425437814,7.66452454059243,0,0,0,0,0,1.8929088006375,0.674338760312407,1.20505514941741,1.54411561825352,1.74303555273925,2.13543557199987,1.34831308160164,1.96221465125346,1.53898862778556,0,2.80483547606892,1.6462960453256,4.41026134156626,0,0,0,0,13.4057398011994,0,0.109750285408626,0,0.804231779293047,4.0738915869753,0.325808305310325,0,0,2.55046890945169,0,0.144366447761074,0,0,1.58040879591855,1.71697232418975,0,0.234004265139238,0,0,0.16798212819886,0.992425680696705,0.268675568108545,0.871901815541886,1.91691339582606,0,0,0,0,0,0.063497894292169,0.763976851116555,1.17217447210047,1.71072446022705,0.102827492703324,0,0,0.672786506072164,0,0.5867062865676,0,0,0,0,0,0.514414748524284,0,0.799266537048298,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,1.77866236955724,3.90419561572865,0,3.01529277601828,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979005787313703,1.02943027143257,0,0,0,2.42502057157008,0,3.62868351995616,0.496215615637554,0.460385919864187,0,0.128139149255701,0.511707249066704,0.321707842287215,1.48418066444991,0.154209693802656,0,0.0821271560138091,0,0,12.2068044087538,0.802025881213139,1.01289087829486,0.114814448164607,0.182091168006717,0,16.6943856775742,5.46808893441345,24.3148428444825,21.9208836979891,15.1994345605741,0,0,1.94324324491925,1.54227252690289,6.77366093859632,13.545623894081,2.80363900349542,4.15538004464362,17.0144813588856,0,0,1.02580050046556,1.31205858279882,0.325378394664303,0.103041011647722,0.732555718546747,1.40266149865,3.44559322797703,1.95018073810956,0,0.773365746336976,0.154048617114644,0,0.413509717453592,0.107420244868274,0.145016693914229,0.340906509664404,0.979352392114111,0.495854746082934,1.34533047155574,1.65896526242959,1.31505115112215,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0.274537029736055,0.471249609382746,0.202182481573316,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04980416073495,2.4055528181378,4.69211592875051,0,0,0.43050537267123,0,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,8.22545347681543,2.88743956579008,2.69544237579135,0,0,0,0,0,0,0,0,0.842391534340376,1.82587743226554,0.313359791546046,0,0,0.802940375518498,0,7.23938604073555,0,9.83170445787066,6.93395934466489,9.00985365244306,1.56310476321632,0,0,2.16364542780786,0,0,7.29848107592057,0,0.728163130497081,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,1.68803299692615,0.222617410045812,0,6.3337622438398,0,0.828851746593443,0,3.47713520507326,0.246169610922139,0,7.09959974063882,4.29650819221462,0.511572370226872,0.0986434056369336,0,0,0.969332746095218,0.278304294485554,0,0,1.92411999991631,0,2.38966241399549,1.77977555204936,0,0,0,1.38899995946634,0.885741385813839,1.80894657938112,1.52581736317083,0.442317039724898,0,0.219385397153973,0,0,0.307801034015188,0.113942055847001,13.1421425501194,7.98843035246972,5.64966333994442,0,0.549585560411174,0,0,4.08148666627064,1.49590513710141,0,0,0,0,0.476809736941136,3.79796516150449,1.30586246527318,7.35035971456492,4.32777279484182,2.98578579323551,2.0345239835768,1.22206028986725,0,0,0.313265848516366,1.34802265961354,0,0.234264445725339,0,0.978323094660449,0,0,0,2.14250933141343,0.568679216656392,1.65355761355942,1.45163467956146,3.98792323624311,1.323967823502,3.13932918407225,1.19472429772959,1.42304773014896,0,6.42171031839984,1.7638631534588,1.39294730528644,0,0.51595809741485,0,0,0,0.387956065953678,1.76512253383001,0,0,0.993573058514948,0.50648636764703,8.60426084033133,2.16428814679141,4.0556069000477,0,5.47543585185603,4.69600044280254,0,0,0.869767748958028,1.41416420770077,0.543616824294456,1.67364554099733,0.203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| |||
|short_description=p2@C1orf106 | |||
}} |
Latest revision as of 16:42, 19 September 2015
Short description: | p2@C1orf106 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C1orf106_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_uc001gvo.2_5end |
EntrezGene: | C1orf106 |
HGNC: | 25599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.08e-24 | 253 |
kidney cell | 2.33e-14 | 17 |
kidney epithelial cell | 2.33e-14 | 17 |
endodermal cell | 3.64e-14 | 58 |
kidney tubule cell | 4.13e-13 | 10 |
nephron tubule epithelial cell | 4.13e-13 | 10 |
epithelial cell of nephron | 8.87e-13 | 15 |
endo-epithelial cell | 5.20e-12 | 42 |
germ line cell | 9.34e-10 | 7 |
germ cell | 9.34e-10 | 7 |
kidney cortical cell | 3.51e-09 | 12 |
renal cortical epithelial cell | 3.51e-09 | 12 |
embryonic stem cell | 1.89e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
kidney | 1.11e-17 | 26 |
kidney mesenchyme | 1.11e-17 | 26 |
upper urinary tract | 1.11e-17 | 26 |
kidney rudiment | 1.11e-17 | 26 |
kidney field | 1.11e-17 | 26 |
cavitated compound organ | 6.43e-17 | 31 |
trunk region element | 2.62e-16 | 101 |
abdomen element | 2.92e-15 | 54 |
abdominal segment element | 2.92e-15 | 54 |
nephron tubule epithelium | 4.13e-13 | 10 |
nephron epithelium | 8.87e-13 | 15 |
renal tubule | 8.87e-13 | 15 |
nephron tubule | 8.87e-13 | 15 |
nephron | 8.87e-13 | 15 |
uriniferous tubule | 8.87e-13 | 15 |
nephrogenic mesenchyme | 8.87e-13 | 15 |
urinary system structure | 9.20e-13 | 47 |
abdominal segment of trunk | 1.15e-12 | 60 |
abdomen | 1.15e-12 | 60 |
renal system | 2.61e-12 | 48 |
excretory tube | 1.04e-11 | 16 |
kidney epithelium | 1.04e-11 | 16 |
subdivision of trunk | 5.18e-10 | 112 |
cortex of kidney | 3.51e-09 | 12 |
renal parenchyma | 3.51e-09 | 12 |
endoderm-derived structure | 1.01e-08 | 160 |
endoderm | 1.01e-08 | 160 |
presumptive endoderm | 1.01e-08 | 160 |
digestive system | 1.52e-08 | 145 |
digestive tract | 1.52e-08 | 145 |
primitive gut | 1.52e-08 | 145 |
subdivision of digestive tract | 1.77e-08 | 118 |
parenchyma | 3.30e-08 | 15 |
cortex | 8.72e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.34e-22 | 106 |
cell type cancer | 1.14e-16 | 143 |
cancer | 5.59e-11 | 235 |
disease of cellular proliferation | 2.63e-10 | 239 |
adenocarcinoma | 1.87e-09 | 25 |
disease of anatomical entity | 7.88e-08 | 39 |