FFCP PHASE1:Hg19::chr6:10838674..10838689,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4117 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6816 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=23bp_to_uc010jou.2_5end | |||
|cluster_id=chr6:10838674..10838689,- | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_4_at_MAK_5end | |||
|id=chr6:10838674..10838689,- | |||
|ontology_enrichment_celltype=CL:0000623!2.40e-10!3;CL:0000825!2.40e-10!3;CL:0000080!2.86e-08!6;CL:0000081!2.14e-07!11;CL:0000094!6.09e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000771;2.23e-11;2!CL:0002363;3.70e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,2.23e-11,2;CL:0002363,4.52e-11,2;CL:0000008,4.52e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.30e-27;3!CL:0000008;3.70e-11;2 | |||
|ontology_enrichment_disease=DOID:5409!1.08e-07!4;DOID:1325!2.11e-07!7;DOID:3904!2.11e-07!7 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003296!1.94e-08!4;UBERON:0010133!1.94e-08!4;UBERON:0001894!4.16e-08!7;UBERON:0006222!4.16e-08!7;UBERON:0001905!4.60e-08!2;UBERON:0002757!4.60e-08!2;UBERON:0010134!4.60e-08!2;UBERON:0002784!4.60e-08!2;UBERON:0005408!4.60e-08!2;UBERON:0001899!4.60e-08!2;UBERON:0000178!7.52e-07!15;UBERON:0000179!7.52e-07!15;UBERON:0000463!7.52e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.48e-40;2!UBERON:0002757;5.48e-40;2!UBERON:0010134;5.48e-40;2!UBERON:0005408;5.48e-40;2!UBERON:0001899;5.48e-40;2!UBERON:0003296;1.41e-20;4!UBERON:0010133;1.41e-20;4!UBERON:0002784;1.41e-20;4!UBERON:0000966;5.24e-17;5!UBERON:0005388;5.24e-17;5!UBERON:0001802;5.24e-17;5!UBERON:0000970;2.33e-16;20!UBERON:0002104;1.34e-15;21!UBERON:0000020;2.79e-14;23!UBERON:0001032;1.06e-13;24!UBERON:0004456;1.06e-13;24!UBERON:0001894;3.34e-12;7!UBERON:0003566;3.70e-11;2!UBERON:0001777;3.70e-11;2!UBERON:0000019;4.37e-10;19!UBERON:0000047;4.37e-10;19!UBERON:0004088;4.37e-10;19!UBERON:0010230;4.37e-10;19!UBERON:0001456;3.49e-09;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.49e-40,2;UBERON:0002757,4.49e-40,2;UBERON:0010134,4.49e-40,2;UBERON:0005408,4.49e-40,2;UBERON:0001899,4.49e-40,2;UBERON:0003296,1.28e-20,4;UBERON:0010133,1.28e-20,4;UBERON:0002784,1.28e-20,4;UBERON:0000970,1.42e-15,21;UBERON:0002104,1.42e-15,21;UBERON:0000966,2.33e-14,6;UBERON:0005388,2.33e-14,6;UBERON:0001802,2.33e-14,6;UBERON:0000020,1.11e-13,24;UBERON:0001032,1.11e-13,24;UBERON:0004456,1.11e-13,24;UBERON:0001894,3.15e-12,7;UBERON:0006222,3.15e-12,7;UBERON:0003566,4.52e-11,2;UBERON:0001777,4.52e-11,2;UBERON:0000019,1.36e-09,20;UBERON:0000047,1.36e-09,20;UBERON:0010312,1.36e-09,20;UBERON:0004088,1.36e-09,20;UBERON:0010230,1.36e-09,20;UBERON:0003072,1.36e-09,20;UBERON:0004128,1.36e-09,20;UBERON:0003071,1.36e-09,20;UBERON:0001456,8.94e-09,22;UBERON:0003056,4.21e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,1.15295962733569,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.862510299438069,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,6.55344148263544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,1.60710550763486,1.68141861109412,0,0.682986574053893,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0.47775168788705,2.57315559035963,4.26636751678362,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,2.30875085165401,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909344378618873,1.87574891109325,0.829169439458779,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@MAK | |||
}} |
Latest revision as of 17:09, 19 September 2015
Short description: | p4@MAK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MAK_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 23bp_to_uc010jou.2_5end |
EntrezGene: | MAK |
HGNC: | 6816 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 2.23e-11 | 2 |
keratocyte | 4.52e-11 | 2 |
migratory cranial neural crest cell | 4.52e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
pineal body | 4.49e-40 | 2 |
regional part of epithalamus | 4.49e-40 | 2 |
secretory circumventricular organ | 4.49e-40 | 2 |
circumventricular organ | 4.49e-40 | 2 |
epithalamus | 4.49e-40 | 2 |
gland of diencephalon | 1.28e-20 | 4 |
neuroendocrine gland | 1.28e-20 | 4 |
regional part of diencephalon | 1.28e-20 | 4 |
eye | 1.42e-15 | 21 |
visual system | 1.42e-15 | 21 |
retina | 2.33e-14 | 6 |
photoreceptor array | 2.33e-14 | 6 |
posterior segment of eyeball | 2.33e-14 | 6 |
sense organ | 1.11e-13 | 24 |
sensory system | 1.11e-13 | 24 |
entire sense organ system | 1.11e-13 | 24 |
diencephalon | 3.15e-12 | 7 |
future diencephalon | 3.15e-12 | 7 |
head connective tissue | 4.52e-11 | 2 |
substantia propria of cornea | 4.52e-11 | 2 |
camera-type eye | 1.36e-09 | 20 |
simple eye | 1.36e-09 | 20 |
immature eye | 1.36e-09 | 20 |
ocular region | 1.36e-09 | 20 |
eyeball of camera-type eye | 1.36e-09 | 20 |
optic cup | 1.36e-09 | 20 |
optic vesicle | 1.36e-09 | 20 |
eye primordium | 1.36e-09 | 20 |
face | 8.94e-09 | 22 |
pre-chordal neural plate | 4.21e-08 | 61 |