FFCP PHASE1:Hg19::chr14:32476072..32476090,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=G3V5S5 | |UniProt=G3V5S5 | ||
|association_with_transcript=-17bp_to_ENST00000556949_5end | |association_with_transcript=-17bp_to_ENST00000556949_5end | ||
|cluster_id=chr14:32476072..32476090,+ | |||
|coexpression_cluster_id=C326 | |coexpression_cluster_id=C326 | ||
|description=CAGE_peak_1_at_ENST00000556949_5end | |description=CAGE_peak_1_at_ENST00000556949_5end | ||
|id=chr14:32476072..32476090,+ | |id=chr14:32476072..32476090,+ | ||
|ontology_enrichment_celltype=CL:0000453;1.34e-20;5!CL:0000990;6.51e-12;8!CL:0000451;6.34e-10;10 | |ontology_enrichment_celltype=CL:0000066!1.22e-11!254;CL:0000453!5.50e-08!5;CL:0000223!6.03e-08!59;CL:0000080!8.59e-07!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0000453;1.34e-20;5!CL:0000990;6.51e-12;8!CL:0000451;6.34e-10;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000453,1.34e-20,5;CL:0000990,6.51e-12,8;CL:0000451,6.34e-10,10 | ||
|ontology_enrichment_uberon=UBERON:0002331;6.19e-23;10!UBERON:0000178;1.48e-15;15!UBERON:0000179;1.48e-15;15!UBERON:0000463;1.48e-15;15!UBERON:0000478;5.48e-10;24!UBERON:0002390;1.00e-07;32!UBERON:0002394;1.31e-07;4!UBERON:0003928;1.31e-07;4 | |ontology_enrichment_development_v019=UBERON:0009497;1.24e-08;13!UBERON:0001041;3.69e-08;30 | ||
|ontology_enrichment_disease=DOID:305!3.44e-19!106;DOID:0050687!9.80e-14!143;DOID:7!2.87e-09!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!6.18e-12!129;UBERON:0004185!6.18e-12!129;UBERON:0001007!7.13e-11!155;UBERON:0001555!7.13e-11!155;UBERON:0007026!7.13e-11!155;UBERON:0000077!9.86e-11!130;UBERON:0005911!1.48e-10!82;UBERON:0004119!2.11e-10!169;UBERON:0000925!2.11e-10!169;UBERON:0006595!2.11e-10!169;UBERON:0003929!2.16e-10!54;UBERON:0001041!1.86e-09!98;UBERON:0005172!1.01e-08!55;UBERON:0005173!1.01e-08!55;UBERON:0009497!1.38e-08!25;UBERON:0000015!1.38e-08!25;UBERON:0002423!1.38e-08!25;UBERON:0006235!1.38e-08!25;UBERON:0004161!1.38e-08!25;UBERON:0003104!1.79e-08!238;UBERON:0009142!1.79e-08!238;UBERON:0005177!2.79e-08!107;UBERON:0008835!8.83e-08!22;UBERON:0003894!8.83e-08!22;UBERON:0002417!1.34e-07!61;UBERON:0000916!1.34e-07!61;UBERON:0009854!2.13e-07!23;UBERON:0000481!9.67e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;6.19e-23;10!UBERON:0000178;1.48e-15;15!UBERON:0000179;1.48e-15;15!UBERON:0000463;1.48e-15;15!UBERON:0000478;5.48e-10;24!UBERON:0002390;1.00e-07;32!UBERON:0002394;1.31e-07;4!UBERON:0003928;1.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,5.53e-23,10;UBERON:0000358,5.53e-23,10;UBERON:0000307,5.53e-23,10;UBERON:0000091,5.53e-23,10;UBERON:0000087,5.53e-23,10;UBERON:0007010,5.53e-23,10;UBERON:0007806,5.53e-23,10;UBERON:0008780,5.53e-23,10;UBERON:0005728,5.53e-23,10;UBERON:0000178,1.37e-15,15;UBERON:0000179,1.37e-15,15;UBERON:0000463,1.37e-15,15;UBERON:0000478,5.23e-10,24 | |||
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| ||
|short_description=p1@ENST00000556949 | |short_description=p1@ENST00000556949 | ||
}} | }} |
Latest revision as of 17:19, 19 September 2015
Short description: | p1@ENST00000556949 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000556949_5end |
Coexpression cluster: | C326_bile_choriocarcinoma_giant_lung_mucinous_glassy_malignant |
Association with transcript: | -17bp_to_ENST00000556949_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.34e-20 | 5 |
conventional dendritic cell | 6.51e-12 | 8 |
dendritic cell | 6.34e-10 | 10 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 5.53e-23 | 10 |
blastocyst | 5.53e-23 | 10 |
blastula | 5.53e-23 | 10 |
bilaminar disc | 5.53e-23 | 10 |
inner cell mass | 5.53e-23 | 10 |
cleaving embryo | 5.53e-23 | 10 |
connecting stalk | 5.53e-23 | 10 |
inner cell mass derived epiblast | 5.53e-23 | 10 |
extraembryonic mesoderm | 5.53e-23 | 10 |
blood | 1.37e-15 | 15 |
haemolymphatic fluid | 1.37e-15 | 15 |
organism substance | 1.37e-15 | 15 |
extraembryonic structure | 5.23e-10 | 24 |