FFCP PHASE1:Hg19::chr12:62273019..62273026,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=33371 | |HGNC=33371 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-72bp_to_ENST00000551916_5end | |association_with_transcript=-72bp_to_ENST00000551916_5end | ||
|cluster_id=chr12:62273019..62273026,+ | |||
|description=CAGE_peak_1_at_KRT8P19_5end | |description=CAGE_peak_1_at_KRT8P19_5end | ||
|id=chr12:62273019..62273026,+ | |id=chr12:62273019..62273026,+ | ||
|ontology_enrichment_celltype=CL:0000066!6.81e-17!254;CL:0002368!1.40e-12!13;CL:0002076!1.19e-09!43;CL:0000244!1.04e-08!4;CL:0000731!1.04e-08!4;CL:0000223!1.62e-08!59;CL:0002202!1.44e-07!9;CL:0002632!1.44e-07!9;CL:0000077!3.55e-07!19;CL:0000322!3.88e-07!3;CL:0000239!5.33e-07!3;CL:1000615!5.33e-07!3;CL:0002306!5.33e-07!3 | |ontology_enrichment_celltype=CL:0000066!6.81e-17!254;CL:0002368!1.40e-12!13;CL:0002076!1.19e-09!43;CL:0000244!1.04e-08!4;CL:0000731!1.04e-08!4;CL:0000223!1.62e-08!59;CL:0002202!1.44e-07!9;CL:0002632!1.44e-07!9;CL:0000077!3.55e-07!19;CL:0000322!3.88e-07!3;CL:0000239!5.33e-07!3;CL:1000615!5.33e-07!3;CL:0002306!5.33e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000244;2.07e-19;4!CL:0000731;2.07e-19;4!CL:0000077;9.89e-16;19!CL:0000322;1.76e-15;3!CL:0000349;4.49e-12;19!CL:0000239;8.30e-08;3!CL:1000615;8.30e-08;3!CL:0002306;8.30e-08;3!CL:0002541;1.37e-07;3!CL:0002231;1.53e-07;3 | |ontology_enrichment_celltype_v019=CL:0000244;2.07e-19;4!CL:0000731;2.07e-19;4!CL:0000077;9.89e-16;19!CL:0000322;1.76e-15;3!CL:0000349;4.49e-12;19!CL:0000239;8.30e-08;3!CL:1000615;8.30e-08;3!CL:0002306;8.30e-08;3!CL:0002541;1.37e-07;3!CL:0002231;1.53e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.62e-19,4;CL:0000731,1.62e-19,4;CL:0000077,1.12e-15,19;CL:0000322,1.41e-15,3;CL:0000066,3.76e-12,253;CL:0000349,4.02e-12,19;CL:0000239,8.17e-08,3;CL:1000615,8.17e-08,3;CL:0002306,8.17e-08,3;CL:0002541,1.18e-07,3;CL:0002231,1.18e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;1.25e-10;2 | |ontology_enrichment_disease_v019=DOID:3910;1.25e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,1.00e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007625!1.14e-09!11;UBERON:0006554!1.62e-08!44;UBERON:0001008!3.14e-08!45;UBERON:0000019!8.81e-08!19;UBERON:0000047!8.81e-08!19;UBERON:0004088!8.81e-08!19;UBERON:0003072!8.81e-08!19;UBERON:0003071!8.81e-08!19;UBERON:0004128!8.81e-08!19;UBERON:0007196!1.09e-07!14;UBERON:0001558!1.09e-07!14;UBERON:0000970!2.76e-07!20;UBERON:0004821!3.88e-07!3;UBERON:0003215!3.88e-07!3;UBERON:0002299!3.88e-07!3;UBERON:0006524!3.88e-07!3;UBERON:0008874!3.88e-07!3;UBERON:0002169!3.88e-07!3;UBERON:0004894!3.88e-07!3;UBERON:0006853!5.33e-07!3;UBERON:0007685!5.33e-07!3;UBERON:0004134!5.33e-07!3;UBERON:0000365!6.33e-07!5;UBERON:0002104!7.74e-07!21;UBERON:0001456!7.74e-07!21 | |ontology_enrichment_uberon=UBERON:0007625!1.14e-09!11;UBERON:0006554!1.62e-08!44;UBERON:0001008!3.14e-08!45;UBERON:0000019!8.81e-08!19;UBERON:0000047!8.81e-08!19;UBERON:0004088!8.81e-08!19;UBERON:0003072!8.81e-08!19;UBERON:0003071!8.81e-08!19;UBERON:0004128!8.81e-08!19;UBERON:0007196!1.09e-07!14;UBERON:0001558!1.09e-07!14;UBERON:0000970!2.76e-07!20;UBERON:0004821!3.88e-07!3;UBERON:0003215!3.88e-07!3;UBERON:0002299!3.88e-07!3;UBERON:0006524!3.88e-07!3;UBERON:0008874!3.88e-07!3;UBERON:0002169!3.88e-07!3;UBERON:0004894!3.88e-07!3;UBERON:0006853!5.33e-07!3;UBERON:0007685!5.33e-07!3;UBERON:0004134!5.33e-07!3;UBERON:0000365!6.33e-07!5;UBERON:0002104!7.74e-07!21;UBERON:0001456!7.74e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.44e-15;5!UBERON:0004821;1.76e-15;3!UBERON:0007499;1.76e-15;3!UBERON:0003215;1.76e-15;3!UBERON:0010368;1.76e-15;3!UBERON:0009911;1.76e-15;3!UBERON:0002299;1.76e-15;3!UBERON:0006524;1.76e-15;3!UBERON:0008874;1.76e-15;3!UBERON:0002169;1.76e-15;3!UBERON:0004894;1.76e-15;3!UBERON:0005910;5.30e-13;6!UBERON:0005631;1.73e-12;10!UBERON:0000158;1.73e-12;10!UBERON:0009856;9.72e-12;4!UBERON:0004903;1.25e-10;2!UBERON:0002173;1.25e-10;2!UBERON:0002186;1.25e-10;2!UBERON:0000478;2.31e-09;24!UBERON:0006554;2.91e-09;30!UBERON:0001008;2.91e-09;30!UBERON:0006853;8.30e-08;3!UBERON:0007685;8.30e-08;3!UBERON:0004134;8.30e-08;3!UBERON:0003124;1.37e-07;3!UBERON:0000920;1.37e-07;3!UBERON:0000305;4.19e-07;7!UBERON:0005911;4.59e-07;36 | |ontology_enrichment_uberon_v019=UBERON:0000365;1.44e-15;5!UBERON:0004821;1.76e-15;3!UBERON:0007499;1.76e-15;3!UBERON:0003215;1.76e-15;3!UBERON:0010368;1.76e-15;3!UBERON:0009911;1.76e-15;3!UBERON:0002299;1.76e-15;3!UBERON:0006524;1.76e-15;3!UBERON:0008874;1.76e-15;3!UBERON:0002169;1.76e-15;3!UBERON:0004894;1.76e-15;3!UBERON:0005910;5.30e-13;6!UBERON:0005631;1.73e-12;10!UBERON:0000158;1.73e-12;10!UBERON:0009856;9.72e-12;4!UBERON:0004903;1.25e-10;2!UBERON:0002173;1.25e-10;2!UBERON:0002186;1.25e-10;2!UBERON:0000478;2.31e-09;24!UBERON:0006554;2.91e-09;30!UBERON:0001008;2.91e-09;30!UBERON:0006853;8.30e-08;3!UBERON:0007685;8.30e-08;3!UBERON:0004134;8.30e-08;3!UBERON:0003124;1.37e-07;3!UBERON:0000920;1.37e-07;3!UBERON:0000305;4.19e-07;7!UBERON:0005911;4.59e-07;36 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.19e-15,5;UBERON:0004821,1.41e-15,3;UBERON:0003215,1.41e-15,3;UBERON:0010368,1.41e-15,3;UBERON:0009911,1.41e-15,3;UBERON:0002299,1.41e-15,3;UBERON:0006524,1.41e-15,3;UBERON:0008874,1.41e-15,3;UBERON:0002169,1.41e-15,3;UBERON:0004894,1.41e-15,3;UBERON:0005910,4.53e-13,6;UBERON:0005631,1.43e-12,14;UBERON:0000158,1.43e-12,14;UBERON:0004903,1.00e-10,2;UBERON:0002173,1.00e-10,2;UBERON:0002186,1.00e-10,2;UBERON:0006554,1.37e-10,47;UBERON:0001008,2.52e-10,48;UBERON:0000478,2.12e-09,24;UBERON:0006853,8.17e-08,3;UBERON:0007685,8.17e-08,3;UBERON:0004134,8.17e-08,3;UBERON:0000920,1.18e-07,3;UBERON:0005911,1.79e-07,82;UBERON:0000305,4.10e-07,7;UBERON:0003124,4.65e-07,7 | |||
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| ||
|short_description=p1@KRT8P19 | |short_description=p1@KRT8P19 | ||
}} | }} |
Latest revision as of 17:50, 19 September 2015
Short description: | p1@KRT8P19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT8P19_5end |
Coexpression cluster: | NA |
Association with transcript: | -72bp_to_ENST00000551916_5end |
EntrezGene: | NA |
HGNC: | 33371 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.62e-19 | 4 |
urothelial cell | 1.62e-19 | 4 |
mesothelial cell | 1.12e-15 | 19 |
pneumocyte | 1.41e-15 | 3 |
epithelial cell | 3.76e-12 | 253 |
extraembryonic cell | 4.02e-12 | 19 |
brush border epithelial cell | 8.17e-08 | 3 |
kidney cortex tubule cell | 8.17e-08 | 3 |
epithelial cell of proximal tubule | 8.17e-08 | 3 |
chorionic membrane mesenchymal stem cell | 1.18e-07 | 3 |
epithelial cell of prostate | 1.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.19e-15 | 5 |
pulmonary alveolus epithelium | 1.41e-15 | 3 |
alveolus | 1.41e-15 | 3 |
pulmonary lobule | 1.41e-15 | 3 |
lobule | 1.41e-15 | 3 |
alveolus of lung | 1.41e-15 | 3 |
alveolar system | 1.41e-15 | 3 |
pulmonary acinus | 1.41e-15 | 3 |
alveolar sac | 1.41e-15 | 3 |
alveolar wall | 1.41e-15 | 3 |
transitional epithelium | 4.53e-13 | 6 |
extraembryonic membrane | 1.43e-12 | 14 |
membranous layer | 1.43e-12 | 14 |
bronchoalveolar duct junction | 1.00e-10 | 2 |
alveolar duct | 1.00e-10 | 2 |
bronchiole | 1.00e-10 | 2 |
urinary system structure | 1.37e-10 | 47 |
renal system | 2.52e-10 | 48 |
extraembryonic structure | 2.12e-09 | 24 |
renal cortex tubule | 8.17e-08 | 3 |
region of nephron tubule | 8.17e-08 | 3 |
proximal tubule | 8.17e-08 | 3 |
egg chorion | 1.18e-07 | 3 |
endo-epithelium | 1.79e-07 | 82 |
amnion | 4.10e-07 | 7 |
chorion | 4.65e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.00e-10 | 2 |