FFCP PHASE1:Hg19::chr5:112074041..112074101,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=324 | |EntrezGene=324 | ||
| Line 8: | Line 8: | ||
|UniProt=E9PFT7 | |UniProt=E9PFT7 | ||
|association_with_transcript=12bp_to_ENST00000512211_5end | |association_with_transcript=12bp_to_ENST00000512211_5end | ||
|cluster_id=chr5:112074041..112074101,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_4_at_APC_5end | |description=CAGE_peak_4_at_APC_5end | ||
Latest revision as of 18:10, 19 September 2015
| Short description: | p4@APC |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_APC_5end |
| Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
| Association with transcript: | 12bp_to_ENST00000512211_5end |
| EntrezGene: | APC |
| HGNC: | 583 |
| UniProt: | E9PFT7 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p4@APC |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 1.04e-141 | 56 |
| neural rod | 1.04e-141 | 56 |
| future spinal cord | 1.04e-141 | 56 |
| neural keel | 1.04e-141 | 56 |
| regional part of nervous system | 1.28e-130 | 53 |
| regional part of brain | 1.28e-130 | 53 |
| central nervous system | 2.43e-116 | 81 |
| brain | 5.23e-108 | 68 |
| future brain | 5.23e-108 | 68 |
| regional part of forebrain | 4.32e-106 | 41 |
Showing 1 to 10 of 99 entries
