FFCP PHASE1:Hg19::chr12:62654131..62654142,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:62654131..62654142,+
|short_description=p2@USP15
|description=CAGE_peak_2_at_USP15_5end
|association_with_transcript=0bp_to_ENST00000280377,ENST0000054952...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9958 | |EntrezGene=9958 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12613 | |HGNC=12613 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y4E8,F8W0H4 | |UniProt=Q9Y4E8,F8W0H4 | ||
|association_with_transcript=0bp_to_ENST00000280377,ENST00000549523_5end | |||
|cluster_id=chr12:62654131..62654142,+ | |||
|description=CAGE_peak_2_at_USP15_5end | |||
|id=chr12:62654131..62654142,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.57e-25!172;CL:0000566!6.57e-25!172;CL:0000763!8.52e-23!112;CL:0000049!8.52e-23!112;CL:0002032!1.61e-22!165;CL:0000837!1.61e-22!165;CL:0000988!7.41e-22!182;CL:0000738!1.44e-15!140;CL:0000766!6.64e-15!76;CL:0002057!1.22e-14!42;CL:0000860!1.83e-13!45;CL:0002031!3.50e-13!124;CL:0000839!8.35e-13!70;CL:0000557!1.58e-12!71;CL:0002087!1.73e-12!119;CL:0002009!3.64e-12!65;CL:0002194!6.19e-12!63;CL:0000576!6.19e-12!63;CL:0000040!6.19e-12!63;CL:0000559!6.19e-12!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.40e-17;33!CL:0002057;1.40e-17;33!CL:0000473;1.15e-14;39!CL:0000234;1.15e-14;39!CL:0000576;3.72e-11;48!CL:0000763;1.05e-09;100!CL:0000766;1.81e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.55e-29,168;CL:0000763,5.34e-29,108;CL:0000049,5.34e-29,108;CL:0000988,2.40e-26,177;CL:0002032,3.39e-26,161;CL:0000837,3.39e-26,161;CL:0000766,6.00e-18,72;CL:0000738,9.80e-17,136;CL:0000860,1.07e-16,42;CL:0002057,1.07e-16,42;CL:0000473,1.94e-16,48;CL:0000234,1.94e-16,48;CL:0000839,2.25e-15,66;CL:0002194,3.15e-15,59;CL:0000576,3.15e-15,59;CL:0000040,3.15e-15,59;CL:0000559,3.15e-15,59;CL:0002009,3.16e-15,61;CL:0000557,9.07e-15,67;CL:0002031,5.86e-14,120;CL:0002087,8.59e-14,115;CL:0000134,9.95e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.40e-12;42!CL:0000049;1.74e-09;108 | |||
|ontology_enrichment_disease=DOID:8692!4.05e-09!31;DOID:1240!1.38e-07!39;DOID:2531!4.45e-07!51;DOID:0060083!4.45e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.67e-12;31!DOID:1240;6.61e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.88e-12,31;DOID:1240,8.48e-10,39;DOID:2531,1.99e-08,51;DOID:0060083,1.99e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.70e-13!102;UBERON:0003061!4.70e-13!102;UBERON:0002193!2.02e-11!112;UBERON:0002371!3.09e-10!80;UBERON:0001474!1.08e-09!86;UBERON:0004765!3.39e-09!101;UBERON:0001434!3.39e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.54e-16,98;UBERON:0003061,9.54e-16,98;UBERON:0002193,2.22e-13,108;UBERON:0004765,2.40e-13,90;UBERON:0002371,7.21e-13,76;UBERON:0001474,1.78e-12,82;UBERON:0001434,4.41e-11,100;UBERON:0002405,9.85e-11,93;UBERON:0002384,5.94e-07,371 | |||
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| ||
|short_description=p2@USP15 | |||
}} | }} |
Latest revision as of 18:25, 19 September 2015
Short description: | p2@USP15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_USP15_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000280377, ENST00000549523_5end |
EntrezGene: | USP15 |
HGNC: | 12613 |
UniProt: | Q9Y4E8F8W0H4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.55e-29 | 168 |
myeloid cell | 5.34e-29 | 108 |
common myeloid progenitor | 5.34e-29 | 108 |
hematopoietic cell | 2.40e-26 | 177 |
hematopoietic oligopotent progenitor cell | 3.39e-26 | 161 |
hematopoietic multipotent progenitor cell | 3.39e-26 | 161 |
myeloid leukocyte | 6.00e-18 | 72 |
leukocyte | 9.80e-17 | 136 |
classical monocyte | 1.07e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.07e-16 | 42 |
defensive cell | 1.94e-16 | 48 |
phagocyte | 1.94e-16 | 48 |
myeloid lineage restricted progenitor cell | 2.25e-15 | 66 |
monopoietic cell | 3.15e-15 | 59 |
monocyte | 3.15e-15 | 59 |
monoblast | 3.15e-15 | 59 |
promonocyte | 3.15e-15 | 59 |
macrophage dendritic cell progenitor | 3.16e-15 | 61 |
granulocyte monocyte progenitor cell | 9.07e-15 | 67 |
hematopoietic lineage restricted progenitor cell | 5.86e-14 | 120 |
nongranular leukocyte | 8.59e-14 | 115 |
mesenchymal cell | 9.95e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.54e-16 | 98 |
blood island | 9.54e-16 | 98 |
hemolymphoid system | 2.22e-13 | 108 |
skeletal element | 2.40e-13 | 90 |
bone marrow | 7.21e-13 | 76 |
bone element | 1.78e-12 | 82 |
skeletal system | 4.41e-11 | 100 |
immune system | 9.85e-11 | 93 |
connective tissue | 5.94e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.88e-12 | 31 |
leukemia | 8.48e-10 | 39 |
hematologic cancer | 1.99e-08 | 51 |
immune system cancer | 1.99e-08 | 51 |