FFCP PHASE1:Hg19::chr10:89419667..89419678,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9060 | |EntrezGene=9060 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8604 | |HGNC=8604 | ||
|TSSclassifier=strong | |||
|UniProt=O95340,Q5TB52 | |UniProt=O95340,Q5TB52 | ||
|association_with_transcript=191bp_to_ENST00000456849,NM_001015880,NM_004670,uc001kew.2,uc001kex.2_5end | |association_with_transcript=191bp_to_ENST00000456849,NM_001015880,NM_004670,uc001kew.2,uc001kex.2_5end | ||
|cluster_id=chr10:89419667..89419678,+ | |||
|description=CAGE_peak_2_at_PAPSS2_5end | |description=CAGE_peak_2_at_PAPSS2_5end | ||
|id=chr10:89419667..89419678,+ | |id=chr10:89419667..89419678,+ | ||
|ontology_enrichment_celltype=CL:0000222!7.33e-12!119;CL:0000055!2.06e-11!180;CL:0000057!2.34e-08!75;CL:0000192!3.25e-08!42;CL:0000514!3.25e-08!42;CL:0000359!2.89e-07!32;CL:0000213!7.07e-07!57;CL:0000215!7.07e-07!57 | |ontology_enrichment_celltype=CL:0000222!7.33e-12!119;CL:0000055!2.06e-11!180;CL:0000057!2.34e-08!75;CL:0000192!3.25e-08!42;CL:0000514!3.25e-08!42;CL:0000359!2.89e-07!32;CL:0000213!7.07e-07!57;CL:0000215!7.07e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.31e-08;32!CL:0000192;7.27e-08;43!CL:1000306;2.31e-07;4!CL:0002547;2.31e-07;4!CL:0000136;2.54e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,6.33e-11,43;CL:0000514,6.33e-11,43;CL:0000136,2.00e-09,15;CL:0000359,8.87e-09,32;CL:0000222,9.52e-09,121;CL:0000048,9.87e-08,427;CL:1000306,1.81e-07,4;CL:0002547,1.81e-07,4;CL:0000187,2.26e-07,55;CL:0000723,2.39e-07,433;CL:0000034,7.37e-07,441;CL:0000680,9.89e-07,58;CL:0000056,9.89e-07,58;CL:0000355,9.89e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;7.27e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.01e-11!79;UBERON:0007798!5.01e-11!79;UBERON:0004872!5.81e-11!84;UBERON:0000055!1.00e-10!69;UBERON:0001981!1.89e-10!60;UBERON:0007500!1.89e-10!60;UBERON:0004537!1.89e-10!60;UBERON:0006965!1.89e-10!60;UBERON:0001637!1.66e-08!42;UBERON:0003509!1.66e-08!42;UBERON:0004572!1.66e-08!42;UBERON:0003914!3.33e-08!118;UBERON:0000490!4.17e-08!138;UBERON:0004535!7.60e-08!110;UBERON:0000926!8.99e-08!448;UBERON:0004120!8.99e-08!448;UBERON:0006603!8.99e-08!448;UBERON:0000468!1.40e-07!659;UBERON:0001009!1.54e-07!113;UBERON:0004573!3.75e-07!33;UBERON:0004571!3.75e-07!33;UBERON:0002385!5.16e-07!63;UBERON:0001015!5.16e-07!63;UBERON:0000383!5.16e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.50e-09;33!UBERON:0004571;1.50e-09;33!UBERON:0004797;2.31e-07;4!UBERON:0000415;2.31e-07;4!UBERON:0007240;2.31e-07;4!UBERON:0005742;2.31e-07;4!UBERON:0005734;2.31e-07;4!UBERON:0004664;2.31e-07;4!UBERON:0004663;2.31e-07;4!UBERON:0001637;2.56e-07;42!UBERON:0003509;2.56e-07;42!UBERON:0004572;2.56e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,5.28e-11,33;UBERON:0004571,5.28e-11,33;UBERON:0001637,5.78e-10,42;UBERON:0003509,5.78e-10,42;UBERON:0004572,5.78e-10,42;UBERON:0004872,4.09e-09,83;UBERON:0007500,3.14e-08,59;UBERON:0001981,3.14e-08,59;UBERON:0004537,3.14e-08,59;UBERON:0006965,3.14e-08,59;UBERON:0000415,1.81e-07,4;UBERON:0007240,1.81e-07,4;UBERON:0005742,1.81e-07,4;UBERON:0005734,1.81e-07,4;UBERON:0004664,1.81e-07,4;UBERON:0004663,1.81e-07,4;UBERON:0000055,2.94e-07,68 | |||
|phase1_expression=4.1786027232228,0.428201047781966,2.67813367782345,0,3.12872766099101,0,2.53299878168311,8.84407822797563,0.522371256399677,0,0.697801167972428,0,0,0.247532705920093,0,0,0.602694528023977,0,0,0.123121058076788,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,1.79132379391939,0.971680998056939,0.77272670290256,0.581592955118259,0.377875943688809,0.727752183563449,0.929716147622738,0.411167888021826,0,0.28769239232215,1.0246428261164,0.47296445977717,1.03423704220986,0.645484683583826,1.35426486594342,0.941211697713023,0.272906150057846,0.674170453335254,0.612167784741805,0.320929027076094,0,0.329851300186716,0.997318288108159,0.426224750532694,0,1.13477044938228,0.622822248995575,1.00499466102697,0.521482918420201,1.08594422352558,0,0.736555271975129,0,0.211255286311942,0,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0.50133791063589,1.44846518960824,2.3858578411533,1.45990461090791,0.0945348171640679,0,0,0.851363990735132,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0.198762407366705,0,0.347140501607594,1.13061588384802,0.419499436209906,0.550236083880135,0.417989933073621,0.516833518338658,0,0.66944122552934,0.402829317109147,3.04108842287405,0.732186172644509,0.735326160691737,0,1.42879565254528,2.2452937262617,0.900891843866578,0,0.949265659568129,0.732806975721629,0,0,0,0.496971951695318,4.55869841992487,2.25095607382472,2.29469296599051,1.77334191099179,0,0,1.2333377420858,2.48968828319813,1.34710672069688,0.490385709340376,0.908144565869588,0.576175924479999,0.234321431833797,0.936480230490962,0,1.04614076386261,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.826606249406124,2.37600571456411,0.247266929278557,3.64064544775211,0.718618141816238,0.168336113954066,0,0,0,1.83892677479412,0.901428353439581,0.340296549480063,0,0.427114777637135,1.27159140695737,0.900273288253207,0.515262646192195,0.257640540045629,1.11670113798954,0.168776332241266,1.65642908774038,0.504867548488229,0.368199594569197,1.61646056818812,0,0.302256294682921,0.67824236924195,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.414644220061482,0.252320850875628,1.09493207722749,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0.482022059766964,0.220587945464788,0.217879444092406,0,0.269662616320329,0,0,0.738155454624648,0,1.6462960453256,0,3.80265104465493,0.982827216677626,1.18157981336281,0,0.245976877086227,0.171567810298526,0,0,0,0,0.977424915930974,0,0,0,0.352226082707465,0.577465791044295,0,0.380508304469197,0.790204397959275,1.71697232418975,0,0.468008530278475,0,0,0.16798212819886,0,0,0,0,0.492663237895943,1.14462964217194,0.621984346622316,0.576479813667846,0,0,0.381988425558278,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0.646358578788889,3.57656445851882,0,5.31876233169741,4.16029747645464,0.514414748524284,0,0.266422179016099,0.57191197463259,0,0,0.65147236858747,0.355391948742546,0,13.5647719676814,0.871533458600294,2.69927076191554,0,0,0,0.958499421966331,0,0,0.579125226670317,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0.415941723061614,0.535286966391485,0,0.117141414992713,2.40756879782175,9.09630016223939,0,0,0.368738337083406,1.91143951829782,0.195801157462741,1.02943027143257,0.413536052245775,0,0,0,0,0,3.2254015016441,0.460385919864187,0.561320188866147,4.35673107469383,1.02341449813341,0.965123526861645,0,0.616838775210622,1.9531789784444,1.88892458831761,0.519254429183621,2.5566283261191,0.120859449591622,0.200506470303285,0,1.7222167224691,1.27463817604702,6.16284750309293,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0.325378394664303,1.23649213977267,0.0915694648183434,0,0.574265537996172,0,32.1367859688319,0.096670718292122,0.154048617114644,0.614014698904518,0,0.322260734604821,0.145016693914229,0.170453254832202,0,0,0,0,0,0.929691098594572,2.51849877464512,0,0.924100740528266,5.32306030317022,1.73986598415015,1.8532421910392,5.43874569619567,0.744316738719335,0.949138274156178,2.85945290885737,0.511795582622668,0,1.59101623962968,1.56989728039846,2.15846949099978,1.37268514868027,0.117812402345686,5.45892700247953,4.75530963519025,0.421258456238981,0,2.19342140668156,0,3.13949796238367,2.54529777516683,0,0,1.99031692572366,3.94605796728386,1.73632660280006,0,2.02910376962704,0.6196469961995,0.281695602532241,0.143411352204052,0.196498082026242,2.1400263088875,0,0.633322905892992,1.64647446479951,0,0,0,0.670302275535787,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0.18714054040822,1.31857361344705,0,0,0,0,0,0,0,0.140669416410513,0.445234820091624,0,0,0.19924798825107,1.10513566212459,0,0,0,0.311039587661807,0.269605053441981,0,0,0.19728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| ||
|short_description=p2@PAPSS2 | |short_description=p2@PAPSS2 | ||
}} | }} |
Latest revision as of 18:45, 19 September 2015
Short description: | p2@PAPSS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PAPSS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 191bp_to_ENST00000456849, NM_001015880, NM_004670, uc001kew.2, uc001kex.2_5end |
EntrezGene: | PAPSS2 |
HGNC: | 8604 |
UniProt: | O95340Q5TB52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.33e-11 | 43 |
smooth muscle myoblast | 6.33e-11 | 43 |
fat cell | 2.00e-09 | 15 |
vascular associated smooth muscle cell | 8.87e-09 | 32 |
mesodermal cell | 9.52e-09 | 121 |
multi fate stem cell | 9.87e-08 | 427 |
fibroblast of tunica adventitia of artery | 1.81e-07 | 4 |
fibroblast of the aortic adventitia | 1.81e-07 | 4 |
muscle cell | 2.26e-07 | 55 |
somatic stem cell | 2.39e-07 | 433 |
stem cell | 7.37e-07 | 441 |
muscle precursor cell | 9.89e-07 | 58 |
myoblast | 9.89e-07 | 58 |
multi-potent skeletal muscle stem cell | 9.89e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 5.28e-11 | 33 |
systemic arterial system | 5.28e-11 | 33 |
artery | 5.78e-10 | 42 |
arterial blood vessel | 5.78e-10 | 42 |
arterial system | 5.78e-10 | 42 |
splanchnic layer of lateral plate mesoderm | 4.09e-09 | 83 |
epithelial tube open at both ends | 3.14e-08 | 59 |
blood vessel | 3.14e-08 | 59 |
blood vasculature | 3.14e-08 | 59 |
vascular cord | 3.14e-08 | 59 |
artery wall | 1.81e-07 | 4 |
tunica adventitia of artery | 1.81e-07 | 4 |
adventitia | 1.81e-07 | 4 |
tunica adventitia of blood vessel | 1.81e-07 | 4 |
aorta tunica adventitia | 1.81e-07 | 4 |
aorta wall | 1.81e-07 | 4 |
vessel | 2.94e-07 | 68 |