FFCP PHASE1:Hg19::chr11:67351250..67351261,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2950 | |EntrezGene=2950 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4638 | |HGNC=4638 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_ENST00000494593_5end | |association_with_transcript=-31bp_to_ENST00000494593_5end | ||
|cluster_id=chr11:67351250..67351261,+ | |||
|coexpression_cluster_id=C185 | |||
|description=CAGE_peak_2_at_GSTP1_5end | |description=CAGE_peak_2_at_GSTP1_5end | ||
|id=chr11:67351250..67351261,+ | |id=chr11:67351250..67351261,+ | ||
|ontology_enrichment_celltype=CL:0000144!1.34e-14!625;CL:0002371!6.59e-14!591;CL:0002321!5.57e-12!248;CL:0000220!2.75e-11!246;CL:0000012!5.93e-11!682;CL:0000393!1.15e-10!60;CL:0000211!1.15e-10!60;CL:0000548!2.07e-10!679;CL:0000004!2.07e-10!679;CL:0000255!2.07e-10!679;CL:0000183!3.22e-10!59;CL:0000222!2.70e-08!119;CL:0000187!3.05e-08!54;CL:0000055!4.62e-08!180;CL:0000680!6.08e-08!57;CL:0000056!6.08e-08!57;CL:0000355!6.08e-08!57;CL:0000192!2.80e-07!42;CL:0000514!2.80e-07!42;CL:0000221!6.11e-07!71 | |ontology_enrichment_celltype=CL:0000144!1.34e-14!625;CL:0002371!6.59e-14!591;CL:0002321!5.57e-12!248;CL:0000220!2.75e-11!246;CL:0000012!5.93e-11!682;CL:0000393!1.15e-10!60;CL:0000211!1.15e-10!60;CL:0000548!2.07e-10!679;CL:0000004!2.07e-10!679;CL:0000255!2.07e-10!679;CL:0000183!3.22e-10!59;CL:0000222!2.70e-08!119;CL:0000187!3.05e-08!54;CL:0000055!4.62e-08!180;CL:0000680!6.08e-08!57;CL:0000056!6.08e-08!57;CL:0000355!6.08e-08!57;CL:0000192!2.80e-07!42;CL:0000514!2.80e-07!42;CL:0000221!6.11e-07!71 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.30e-12,250;CL:0000393,1.47e-10,61;CL:0000211,1.47e-10,61;CL:0000222,2.12e-08,121;CL:0000187,3.71e-08,55;CL:0000680,7.24e-08,58;CL:0000056,7.24e-08,58;CL:0000355,7.24e-08,58;CL:0000221,3.42e-07,72;CL:0000192,3.50e-07,43;CL:0000514,3.50e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!3.27e-09!82;UBERON:0000914!5.74e-09!83;UBERON:0002329!5.74e-09!83;UBERON:0003077!5.74e-09!83;UBERON:0003059!5.74e-09!83;UBERON:0007282!5.74e-09!83;UBERON:0009618!5.74e-09!83;UBERON:0007285!5.74e-09!83;UBERON:0004290!6.94e-09!70;UBERON:0001134!7.34e-09!61;UBERON:0002036!7.34e-09!61;UBERON:0003082!7.34e-09!61;UBERON:0002385!1.46e-08!63;UBERON:0001015!1.46e-08!63;UBERON:0000383!1.46e-08!63;UBERON:0002049!2.89e-08!79;UBERON:0007798!2.89e-08!79;UBERON:0002204!9.39e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.79e-11,78;UBERON:0000486,3.73e-09,83;UBERON:0007524,7.40e-09,73;UBERON:0002329,8.10e-09,71;UBERON:0003059,8.10e-09,71;UBERON:0007282,8.10e-09,71;UBERON:0004290,8.10e-09,71;UBERON:0009618,8.10e-09,71;UBERON:0001134,8.83e-09,62;UBERON:0002036,8.83e-09,62;UBERON:0003082,8.83e-09,62;UBERON:0000926,9.03e-09,315;UBERON:0004120,9.03e-09,315;UBERON:0006603,9.03e-09,315;UBERON:0002204,9.81e-09,167;UBERON:0002049,1.13e-08,78;UBERON:0007798,1.13e-08,78;UBERON:0003077,1.29e-08,72;UBERON:0007285,1.29e-08,72;UBERON:0002385,1.72e-08,64;UBERON:0001015,1.72e-08,64;UBERON:0000383,1.72e-08,64;UBERON:0003104,1.96e-07,160;UBERON:0009142,1.96e-07,160 | |||
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| ||
|short_description=p2@GSTP1 | |short_description=p2@GSTP1 | ||
}} | }} |
Latest revision as of 18:53, 19 September 2015
Short description: | p2@GSTP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GSTP1_5end |
Coexpression cluster: | C185_small_adrenal_gastric_Mesenchymal_acute_HES3GFP_testis |
Association with transcript: | -31bp_to_ENST00000494593_5end |
EntrezGene: | GSTP1 |
HGNC: | 4638 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.30e-12 | 250 |
electrically responsive cell | 1.47e-10 | 61 |
electrically active cell | 1.47e-10 | 61 |
mesodermal cell | 2.12e-08 | 121 |
muscle cell | 3.71e-08 | 55 |
muscle precursor cell | 7.24e-08 | 58 |
myoblast | 7.24e-08 | 58 |
multi-potent skeletal muscle stem cell | 7.24e-08 | 58 |
ectodermal cell | 3.42e-07 | 72 |
smooth muscle cell | 3.50e-07 | 43 |
smooth muscle myoblast | 3.50e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 3.79e-11 | 78 |
multilaminar epithelium | 3.73e-09 | 83 |
dense mesenchyme tissue | 7.40e-09 | 73 |
somite | 8.10e-09 | 71 |
presomitic mesoderm | 8.10e-09 | 71 |
presumptive segmental plate | 8.10e-09 | 71 |
dermomyotome | 8.10e-09 | 71 |
trunk paraxial mesoderm | 8.10e-09 | 71 |
skeletal muscle tissue | 8.83e-09 | 62 |
striated muscle tissue | 8.83e-09 | 62 |
myotome | 8.83e-09 | 62 |
mesoderm | 9.03e-09 | 315 |
mesoderm-derived structure | 9.03e-09 | 315 |
presumptive mesoderm | 9.03e-09 | 315 |
musculoskeletal system | 9.81e-09 | 167 |
vasculature | 1.13e-08 | 78 |
vascular system | 1.13e-08 | 78 |
paraxial mesoderm | 1.29e-08 | 72 |
presumptive paraxial mesoderm | 1.29e-08 | 72 |
muscle tissue | 1.72e-08 | 64 |
musculature | 1.72e-08 | 64 |
musculature of body | 1.72e-08 | 64 |
mesenchyme | 1.96e-07 | 160 |
entire embryonic mesenchyme | 1.96e-07 | 160 |