FFCP PHASE1:Hg19::chr3:118905564..118905595,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7348 | |EntrezGene=7348 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12578 | |HGNC=12578 | ||
|TSSclassifier=strong | |||
|UniProt=C9J9M7 | |UniProt=C9J9M7 | ||
|association_with_transcript=0bp_to_ENST00000460625_5end | |association_with_transcript=0bp_to_ENST00000460625_5end | ||
|cluster_id=chr3:118905564..118905595,+ | |||
|coexpression_cluster_id=C1849 | |coexpression_cluster_id=C1849 | ||
|description=CAGE_peak_4_at_UPK1B_5end | |description=CAGE_peak_4_at_UPK1B_5end | ||
|id=chr3:118905564..118905595,+ | |id=chr3:118905564..118905595,+ | ||
|ontology_enrichment_celltype=CL:0002541!6.32e-15!3;CL:0002537!1.30e-09!5;CL:0000080!3.36e-08!6 | |ontology_enrichment_celltype=CL:0002541!6.32e-15!3;CL:0002537!1.30e-09!5;CL:0000080!3.36e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.10e-20;5!CL:0000349;2.07e-12;19!CL:0002541;1.30e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.10e-20,5;CL:0000349,2.07e-12,19;CL:0002541,1.30e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000478!2.23e-22!24;UBERON:0005631!9.63e-21!14;UBERON:0000158!9.63e-21!14;UBERON:0003124!1.39e-16!7;UBERON:0000476!6.32e-15!3;UBERON:0000920!6.32e-15!3;UBERON:0000305!5.65e-07!7 | |ontology_enrichment_uberon=UBERON:0000478!2.23e-22!24;UBERON:0005631!9.63e-21!14;UBERON:0000158!9.63e-21!14;UBERON:0003124!1.39e-16!7;UBERON:0000476!6.32e-15!3;UBERON:0000920!6.32e-15!3;UBERON:0000305!5.65e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.77e-37;24!UBERON:0002331;5.74e-23;10!UBERON:0005631;6.92e-23;10!UBERON:0000158;6.92e-23;10!UBERON:0000178;1.41e-15;15!UBERON:0000179;1.41e-15;15!UBERON:0000463;1.41e-15;15!UBERON:0000305;4.37e-15;7!UBERON:0003124;1.30e-09;3!UBERON:0000920;1.30e-09;3!UBERON:0002390;9.82e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,4.63e-37,24;UBERON:0002331,5.53e-23,10;UBERON:0000358,5.53e-23,10;UBERON:0000307,5.53e-23,10;UBERON:0000091,5.53e-23,10;UBERON:0000087,5.53e-23,10;UBERON:0007010,5.53e-23,10;UBERON:0007806,5.53e-23,10;UBERON:0008780,5.53e-23,10;UBERON:0005728,5.53e-23,10;UBERON:0005631,1.41e-16,14;UBERON:0000158,1.41e-16,14;UBERON:0000178,1.37e-15,15;UBERON:0000179,1.37e-15,15;UBERON:0000463,1.37e-15,15;UBERON:0000305,4.37e-15,7;UBERON:0004871,2.49e-13,8;UBERON:0000920,1.30e-09,3 | |||
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|short_description=p4@UPK1B | |short_description=p4@UPK1B | ||
}} | }} |
Latest revision as of 19:28, 19 September 2015
Short description: | p4@UPK1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_UPK1B_5end |
Coexpression cluster: | C1849_anaplastic_cord_hairy_mycosis_adult_myeloma_NK |
Association with transcript: | 0bp_to_ENST00000460625_5end |
EntrezGene: | UPK1B |
HGNC: | 12578 |
UniProt: | C9J9M7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.10e-20 | 5 |
extraembryonic cell | 2.07e-12 | 19 |
chorionic membrane mesenchymal stem cell | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 4.63e-37 | 24 |
umbilical cord | 5.53e-23 | 10 |
blastocyst | 5.53e-23 | 10 |
blastula | 5.53e-23 | 10 |
bilaminar disc | 5.53e-23 | 10 |
inner cell mass | 5.53e-23 | 10 |
cleaving embryo | 5.53e-23 | 10 |
connecting stalk | 5.53e-23 | 10 |
inner cell mass derived epiblast | 5.53e-23 | 10 |
extraembryonic mesoderm | 5.53e-23 | 10 |
extraembryonic membrane | 1.41e-16 | 14 |
membranous layer | 1.41e-16 | 14 |
blood | 1.37e-15 | 15 |
haemolymphatic fluid | 1.37e-15 | 15 |
organism substance | 1.37e-15 | 15 |
amnion | 4.37e-15 | 7 |
somatic layer of lateral plate mesoderm | 2.49e-13 | 8 |
egg chorion | 1.30e-09 | 3 |