FFCP PHASE1:Hg19::chr15:90809459..90809470,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51335 | |EntrezGene=51335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=18077 | |HGNC=18077 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPE2 | |UniProt=Q9NPE2 | ||
|association_with_transcript=-101bp_to_AY049780_5end | |association_with_transcript=-101bp_to_AY049780_5end | ||
|cluster_id=chr15:90809459..90809470,+ | |||
|coexpression_cluster_id=C149 | |coexpression_cluster_id=C149 | ||
|description=CAGE_peak_16_at_NGRN_5end | |description=CAGE_peak_16_at_NGRN_5end | ||
|id=chr15:90809459..90809470,+ | |id=chr15:90809459..90809470,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.93e-12!32;UBERON:0001893!2.15e-12!34;UBERON:0002791!7.10e-12!33;UBERON:0001049!1.04e-11!57;UBERON:0005068!1.04e-11!57;UBERON:0006241!1.04e-11!57;UBERON:0007135!1.04e-11!57;UBERON:0002780!1.24e-11!41;UBERON:0001890!1.24e-11!41;UBERON:0006240!1.24e-11!41;UBERON:0002020!1.77e-11!34;UBERON:0003528!1.77e-11!34;UBERON:0003080!3.44e-11!42;UBERON:0000956!3.72e-11!25;UBERON:0000203!3.72e-11!25;UBERON:0002616!4.21e-10!59;UBERON:0000955!1.83e-09!69;UBERON:0006238!1.83e-09!69;UBERON:0002619!5.82e-09!22;UBERON:0001950!6.97e-09!20;UBERON:0001017!8.24e-09!82;UBERON:0005743!5.52e-08!86;UBERON:0003056!4.49e-07!61;UBERON:0000073!6.51e-07!94;UBERON:0001016!6.51e-07!94;UBERON:0003075!9.62e-07!86;UBERON:0007284!9.62e-07!86 | |ontology_enrichment_uberon=UBERON:0001869!1.93e-12!32;UBERON:0001893!2.15e-12!34;UBERON:0002791!7.10e-12!33;UBERON:0001049!1.04e-11!57;UBERON:0005068!1.04e-11!57;UBERON:0006241!1.04e-11!57;UBERON:0007135!1.04e-11!57;UBERON:0002780!1.24e-11!41;UBERON:0001890!1.24e-11!41;UBERON:0006240!1.24e-11!41;UBERON:0002020!1.77e-11!34;UBERON:0003528!1.77e-11!34;UBERON:0003080!3.44e-11!42;UBERON:0000956!3.72e-11!25;UBERON:0000203!3.72e-11!25;UBERON:0002616!4.21e-10!59;UBERON:0000955!1.83e-09!69;UBERON:0006238!1.83e-09!69;UBERON:0002619!5.82e-09!22;UBERON:0001950!6.97e-09!20;UBERON:0001017!8.24e-09!82;UBERON:0005743!5.52e-08!86;UBERON:0003056!4.49e-07!61;UBERON:0000073!6.51e-07!94;UBERON:0001016!6.51e-07!94;UBERON:0003075!9.62e-07!86;UBERON:0007284!9.62e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002021;3.49e-79;5!UBERON:0001950;4.86e-20;20!UBERON:0002619;2.02e-18;22!UBERON:0000956;1.86e-16;25!UBERON:0000203;1.86e-16;25!UBERON:0002791;1.90e-14;32!UBERON:0001869;1.90e-14;32!UBERON:0002780;1.77e-12;41!UBERON:0001890;1.77e-12;41!UBERON:0001893;1.77e-12;34!UBERON:0003528;3.56e-08;34!UBERON:0002020;3.56e-08;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.49e-79,5;UBERON:0001950,4.86e-20,20;UBERON:0002619,2.02e-18,22;UBERON:0000956,1.86e-16,25;UBERON:0000203,1.86e-16,25;UBERON:0002791,2.96e-13,32;UBERON:0001869,2.96e-13,32;UBERON:0003528,1.42e-12,34;UBERON:0002020,1.42e-12,34;UBERON:0001893,1.42e-12,34;UBERON:0002780,1.07e-10,41;UBERON:0001890,1.07e-10,41;UBERON:0003080,1.07e-10,41;UBERON:0006240,1.07e-10,41;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003056,1.20e-07,61;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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| ||
|short_description=p16@NGRN | |short_description=p16@NGRN | ||
}} | }} |
Latest revision as of 19:35, 19 September 2015
Short description: | p16@NGRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_NGRN_5end |
Coexpression cluster: | C149_occipital_medial_brain_amygdala_parietal_cerebral_cerebellum |
Association with transcript: | -101bp_to_AY049780_5end |
EntrezGene: | NGRN |
HGNC: | 18077 |
UniProt: | Q9NPE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.49e-79 | 5 |
neocortex | 4.86e-20 | 20 |
regional part of cerebral cortex | 2.02e-18 | 22 |
cerebral cortex | 1.86e-16 | 25 |
pallium | 1.86e-16 | 25 |
regional part of telencephalon | 2.96e-13 | 32 |
cerebral hemisphere | 2.96e-13 | 32 |
brain grey matter | 1.42e-12 | 34 |
gray matter | 1.42e-12 | 34 |
telencephalon | 1.42e-12 | 34 |
regional part of forebrain | 1.07e-10 | 41 |
forebrain | 1.07e-10 | 41 |
anterior neural tube | 1.07e-10 | 41 |
future forebrain | 1.07e-10 | 41 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |