FFCP PHASE1:Hg19::chr19:54377109..54377143,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91663 | |EntrezGene=91663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7544 | |HGNC=7544 | ||
|TSSclassifier=strong | |||
|UniProt=Q96S97 | |UniProt=Q96S97 | ||
|association_with_transcript=113bp_to_AK027693_5end | |association_with_transcript=113bp_to_AK027693_5end | ||
|cluster_id=chr19:54377109..54377143,+ | |||
|coexpression_cluster_id=C482 | |||
|description=CAGE_peak_11_at_MYADM_5end | |description=CAGE_peak_11_at_MYADM_5end | ||
|id=chr19:54377109..54377143,+ | |id=chr19:54377109..54377143,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.43e-13!42;CL:0000860!2.45e-11!45;CL:0000766!2.40e-10!76;CL:0000557!2.77e-07!71;CL:0000048!7.53e-07!430 | |ontology_enrichment_celltype=CL:0002057!1.43e-13!42;CL:0000860!2.45e-11!45;CL:0000766!2.40e-10!76;CL:0000557!2.77e-07!71;CL:0000048!7.53e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.71e-20;33!CL:0002057;3.71e-20;33!CL:0000473;2.18e-13;39!CL:0000234;2.18e-13;39!CL:0000576;7.72e-09;48!CL:0000766;1.14e-08;69!CL:0000094;5.33e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.31e-17,42;CL:0002057,3.31e-17,42;CL:0000766,3.00e-16,72;CL:0000473,3.83e-14,48;CL:0000234,3.83e-14,48;CL:0000557,2.13e-11,67;CL:0000839,5.93e-11,66;CL:0000048,3.07e-09,427;CL:0002009,7.47e-09,61;CL:0000723,8.71e-09,433;CL:0002194,8.89e-09,59;CL:0000576,8.89e-09,59;CL:0000040,8.89e-09,59;CL:0000559,8.89e-09,59;CL:0000034,6.99e-08,441;CL:0000134,1.85e-07,354;CL:0000763,2.49e-07,108;CL:0000049,2.49e-07,108;CL:0000094,2.54e-07,8;CL:0002320,5.89e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.73e-13;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.85e-11!216;UBERON:0000926!1.55e-09!448;UBERON:0004120!1.55e-09!448;UBERON:0006603!1.55e-09!448;UBERON:0002204!3.81e-08!167;UBERON:0004872!4.02e-07!84 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,5.52e-17,315;UBERON:0004120,5.52e-17,315;UBERON:0006603,5.52e-17,315;UBERON:0003081,8.18e-14,203;UBERON:0002371,6.83e-09,76;UBERON:0002204,2.21e-08,167;UBERON:0001474,8.94e-08,82;UBERON:0002384,4.42e-07,371;UBERON:0001637,5.60e-07,42;UBERON:0003509,5.60e-07,42;UBERON:0004572,5.60e-07,42 | |||
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| ||
|short_description=p11@MYADM | |short_description=p11@MYADM | ||
}} | }} |
Latest revision as of 20:12, 19 September 2015
Short description: | p11@MYADM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_MYADM_5end |
Coexpression cluster: | C482_CD14_Mast_Fibroblast_Smooth_Neutrophils_Basophils_Mesenchymal |
Association with transcript: | 113bp_to_AK027693_5end |
EntrezGene: | MYADM |
HGNC: | 7544 |
UniProt: | Q96S97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.31e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.31e-17 | 42 |
myeloid leukocyte | 3.00e-16 | 72 |
defensive cell | 3.83e-14 | 48 |
phagocyte | 3.83e-14 | 48 |
granulocyte monocyte progenitor cell | 2.13e-11 | 67 |
myeloid lineage restricted progenitor cell | 5.93e-11 | 66 |
multi fate stem cell | 3.07e-09 | 427 |
macrophage dendritic cell progenitor | 7.47e-09 | 61 |
somatic stem cell | 8.71e-09 | 433 |
monopoietic cell | 8.89e-09 | 59 |
monocyte | 8.89e-09 | 59 |
monoblast | 8.89e-09 | 59 |
promonocyte | 8.89e-09 | 59 |
stem cell | 6.99e-08 | 441 |
mesenchymal cell | 1.85e-07 | 354 |
myeloid cell | 2.49e-07 | 108 |
common myeloid progenitor | 2.49e-07 | 108 |
granulocyte | 2.54e-07 | 8 |
connective tissue cell | 5.89e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 5.52e-17 | 315 |
mesoderm-derived structure | 5.52e-17 | 315 |
presumptive mesoderm | 5.52e-17 | 315 |
lateral plate mesoderm | 8.18e-14 | 203 |
bone marrow | 6.83e-09 | 76 |
musculoskeletal system | 2.21e-08 | 167 |
bone element | 8.94e-08 | 82 |
connective tissue | 4.42e-07 | 371 |
artery | 5.60e-07 | 42 |
arterial blood vessel | 5.60e-07 | 42 |
arterial system | 5.60e-07 | 42 |